Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:25:52 (2080142): wrapper (7.7.26015): starting
15:25:52 (2080142): wrapper: running run_atlas (--nthreads 9)
[2026-02-07 15:25:52] Arguments: --nthreads 9
[2026-02-07 15:25:52] Threads: 9
[2026-02-07 15:25:52] Checking for CVMFS
[2026-02-07 15:25:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 15:25:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 15:25:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 15:25:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 15:25:54] 2.13.3.0 3085114 4379 204756 155995 2 235 25439867 32935937 31291 16776704 1 24367085 99.582 26592516 9533 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 15:25:54] CVMFS is ok
[2026-02-07 15:25:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 15:25:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 15:25:54] Further information can be found at the LHC@home message board.
[2026-02-07 15:25:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 15:25:54] Checking for apptainer binary...
[2026-02-07 15:25:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 15:25:54] Running /usr/bin/apptainer --version
[2026-02-07 15:25:54] apptainer version 1.4.5-2.el9
[2026-02-07 15:25:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 15:25:55] lc-12-33.aglt2.org
[2026-02-07 15:25:55] apptainer works
[2026-02-07 15:25:55] Set ATHENA_PROC_NUMBER=9
[2026-02-07 15:25:55] Set ATHENA_CORE_NUMBER=9
[2026-02-07 15:25:55] Starting ATLAS job with PandaID=7000740600
[2026-02-07 15:25:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 23:39:41]  *** The last 200 lines of the pilot log: ***
[2026-02-07 23:39:41] 2026-02-08 04:38:39,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 23:39:41] 2026-02-08 04:38:39,067 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 23:39:41] 2026-02-08 04:38:39,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 23:39:41] 2026-02-08 04:38:39,147 | INFO     | fitting pss+swap vs Time
[2026-02-07 23:39:41] 2026-02-08 04:38:39,148 | INFO     | sum of square deviations: 34722983706.00835
[2026-02-07 23:39:41] 2026-02-08 04:38:39,375 | INFO     | sum of deviations: 284082061348.4979
[2026-02-07 23:39:41] 2026-02-08 04:38:39,375 | INFO     | mean x: 1770510821.7344398
[2026-02-07 23:39:41] 2026-02-08 04:38:39,375 | INFO     | mean y: 2506603.5663900413
[2026-02-07 23:39:41] 2026-02-08 04:38:39,376 | INFO     | intersect: -14482722204.438099
[2026-02-07 23:39:41] 2026-02-08 04:38:39,376 | INFO     | chi2: 5.254256257886812
[2026-02-07 23:39:41] 2026-02-08 04:38:39,377 | INFO     | sum of square deviations: 33653593468.23054
[2026-02-07 23:39:41] 2026-02-08 04:38:39,432 | INFO     | sum of deviations: 311365025733.0797
[2026-02-07 23:39:41] 2026-02-08 04:38:39,433 | INFO     | mean x: 1770510669.2368972
[2026-02-07 23:39:41] 2026-02-08 04:38:39,433 | INFO     | mean y: 2510456.9727463312
[2026-02-07 23:39:41] 2026-02-08 04:38:39,433 | INFO     | intersect: -16378358367.869095
[2026-02-07 23:39:41] 2026-02-08 04:38:39,434 | INFO     | chi2: 4.5691984527688065
[2026-02-07 23:39:41] 2026-02-08 04:38:39,434 | INFO     | current chi2=4.5691984527688065 (change=13.0381498635456 %)
[2026-02-07 23:39:41] 2026-02-08 04:38:39,434 | INFO     | right removable region: 476
[2026-02-07 23:39:41] 2026-02-08 04:38:39,434 | INFO     | sum of square deviations: 33653524538.230545
[2026-02-07 23:39:41] 2026-02-08 04:38:39,571 | INFO     | sum of deviations: 140719924334.8452
[2026-02-07 23:39:41] 2026-02-08 04:38:39,571 | INFO     | mean x: 1770510974.2368972
[2026-02-07 23:39:41] 2026-02-08 04:38:39,571 | INFO     | mean y: 2527029.895178197
[2026-02-07 23:39:41] 2026-02-08 04:38:39,571 | INFO     | intersect: -7400744209.811028
[2026-02-07 23:39:41] 2026-02-08 04:38:39,572 | INFO     | chi2: 2.0651648588995943
[2026-02-07 23:39:41] 2026-02-08 04:38:39,572 | INFO     | current chi2=2.0651648588995943 (change=60.69539136391161 %)
[2026-02-07 23:39:41] 2026-02-08 04:38:39,573 | INFO     | sum of square deviations: 32606280929.423824
[2026-02-07 23:39:41] 2026-02-08 04:38:39,683 | INFO     | sum of deviations: 60866126723.76277
[2026-02-07 23:39:41] 2026-02-08 04:38:39,708 | INFO     | mean x: 1770511126.7372882
[2026-02-07 23:39:41] 2026-02-08 04:38:39,708 | INFO     | mean y: 2538636.877118644
[2026-02-07 23:39:41] 2026-02-08 04:38:39,708 | INFO     | intersect: -3302473512.1342607
[2026-02-07 23:39:41] 2026-02-08 04:38:39,709 | INFO     | chi2: 1.049217646952464
[2026-02-07 23:39:41] 2026-02-08 04:38:39,709 | INFO     | current chi2=1.049217646952464 (change=49.19448476808139 %)
[2026-02-07 23:39:41] 2026-02-08 04:38:39,709 | INFO     | sum of square deviations: 31580991464.616776
[2026-02-07 23:39:41] 2026-02-08 04:38:39,765 | INFO     | sum of deviations: 24324108035.11993
[2026-02-07 23:39:41] 2026-02-08 04:38:39,765 | INFO     | mean x: 1770511279.2376873
[2026-02-07 23:39:41] 2026-02-08 04:38:39,765 | INFO     | mean y: 2544067.629550321
[2026-02-07 23:39:41] 2026-02-08 04:38:39,765 | INFO     | intersect: -1361127737.3493087
[2026-02-07 23:39:41] 2026-02-08 04:38:39,766 | INFO     | chi2: 0.857394334836103
[2026-02-07 23:39:41] 2026-02-08 04:38:39,766 | INFO     | current chi2=0.857394334836103 (change=18.282509131782813 %)
[2026-02-07 23:39:41] 2026-02-08 04:38:39,766 | INFO     | left removable region: 30
[2026-02-07 23:39:41] 2026-02-08 04:38:39,767 | INFO     | sum of square deviations: 27509393623.7127
[2026-02-07 23:39:41] 2026-02-08 04:38:39,808 | INFO     | sum of deviations: 22050550940.30045
[2026-02-07 23:39:41] 2026-02-08 04:38:39,808 | INFO     | mean x: 1770511553.7309418
[2026-02-07 23:39:41] 2026-02-08 04:38:39,808 | INFO     | mean y: 2553272.5941704037
[2026-02-07 23:39:41] 2026-02-08 04:38:39,808 | INFO     | intersect: -1416625780.9303703
[2026-02-07 23:39:41] 2026-02-08 04:38:39,809 | INFO     | chi2: 0.04642737824930453
[2026-02-07 23:39:41] 2026-02-08 04:38:39,809 | INFO     | current memory leak: 0.80 B/s (using 446 data points, chi2=0.05)
[2026-02-07 23:39:41] 2026-02-08 04:38:39,810 | INFO     | could have reported an average CPU frequency of 2709 MHz (20 samples)
[2026-02-07 23:39:41] 2026-02-08 04:38:39,820 | INFO     | ..............................
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . Timing measurements:
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . get job = 0 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . initial setup = 33 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . payload setup = 43 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . stage-in = 0 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . payload execution = 29386 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . stage-out = 5 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | . log creation = 1 s
[2026-02-07 23:39:41] 2026-02-08 04:38:39,821 | INFO     | ..............................
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | 
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | job summary report
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | --------------------------------------------------
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | PanDA job id: 7000740600
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | task id: 48442031
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | errors: (none)
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | pilot state: finished 
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | transexitcode: 0
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | exeerrorcode: 0
[2026-02-07 23:39:41] 2026-02-08 04:38:40,941 | INFO     | exeerrordiag: 
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | exitcode: 0
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | exitmsg: OK
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | cpuconsumptiontime: 42114 s
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | nevents: 400
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | neventsw: 0
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | pid: 2102611
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | pgrp: 2102611
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | corecount: 9
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | event service: False
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | sizes: {0: 2282557, 1: 2282613, 2: 2282669, 3: 2283102, 4: 2283130, 15: 2283158, 29433: 2320878, 29440: 2329904, 29441: 2329960, 29443: 2330154}
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | --------------------------------------------------
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | 
[2026-02-07 23:39:41] 2026-02-08 04:38:40,942 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 23:39:41] 2026-02-08 04:38:41,100 | INFO     | job 7000740600 has completed (purged errors)
[2026-02-07 23:39:41] 2026-02-08 04:38:41,101 | INFO     | overall cleanup function is called
[2026-02-07 23:39:41] 2026-02-08 04:38:42,228 | INFO     | --- collectZombieJob: --- 10, [2102611]
[2026-02-07 23:39:41] 2026-02-08 04:38:42,228 | INFO     | zombie collector waiting for pid 2102611
[2026-02-07 23:39:41] 2026-02-08 04:38:42,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 23:39:41] 2026-02-08 04:38:42,229 | INFO     | collected zombie processes
[2026-02-07 23:39:41] 2026-02-08 04:38:42,229 | INFO     | will attempt to kill all subprocesses of pid=2102611
[2026-02-07 23:39:41] 2026-02-08 04:38:47,644 | INFO     | PID=2089236 has CPU usage=17.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-07 23:39:41] 2026-02-08 04:38:47,644 | INFO     | .. there are 78 such processes running
[2026-02-07 23:39:41] 2026-02-08 04:38:47,915 | INFO     | number of running child processes to parent process 2102611: 1
[2026-02-07 23:39:41] 2026-02-08 04:38:47,915 | INFO     | maximum number of monitored processes: 6
[2026-02-07 23:39:41] 2026-02-08 04:38:47,915 | INFO     | aborting job monitoring since job object (job id=7000740600) has expired
[2026-02-07 23:39:41] 2026-02-08 04:38:48,846 | INFO     | process IDs to be killed: [2102611] (in reverse order)
[2026-02-07 23:39:41] 2026-02-08 04:38:49,086 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 23:39:41] 2026-02-08 04:38:49,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 23:39:41] 2026-02-08 04:38:49,142 | INFO     | did not find any defunct processes belonging to 2102611
[2026-02-07 23:39:41] 2026-02-08 04:38:49,195 | INFO     | did not find any defunct processes belonging to 2102611
[2026-02-07 23:39:41] 2026-02-08 04:38:49,196 | INFO     | ready for new job
[2026-02-07 23:39:41] 2026-02-08 04:38:49,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 23:39:41] 2026-02-08 04:38:49,199 | INFO     | **************************************
[2026-02-07 23:39:41] 2026-02-08 04:38:49,199 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 23:39:41] 2026-02-08 04:38:49,199 | INFO     | **************************************
[2026-02-07 23:39:41] 2026-02-08 04:38:49,199 | INFO     | 
[2026-02-07 23:39:41] 2026-02-08 04:38:49,205 | INFO     | architecture information:
[2026-02-07 23:39:41] 2026-02-08 04:38:49,205 | INFO     | executing command: cat /etc/os-release
[2026-02-07 23:39:41] 2026-02-08 04:38:49,329 | INFO     | cat /etc/os-release:
[2026-02-07 23:39:41] NAME="CentOS Linux"
[2026-02-07 23:39:41] VERSION="7 (Core)"
[2026-02-07 23:39:41] ID="centos"
[2026-02-07 23:39:41] ID_LIKE="rhel fedora"
[2026-02-07 23:39:41] VERSION_ID="7"
[2026-02-07 23:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 23:39:41] ANSI_COLOR="0;31"
[2026-02-07 23:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 23:39:41] HOME_URL="https://www.centos.org/"
[2026-02-07 23:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 23:39:41] 
[2026-02-07 23:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 23:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 23:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 23:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 23:39:41] 
[2026-02-07 23:39:41] 2026-02-08 04:38:49,330 | INFO     | **************************************
[2026-02-07 23:39:41] 2026-02-08 04:38:49,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 23:39:41] 2026-02-08 04:38:49,950 | INFO     | sufficient remaining disk space (70925680640 B)
[2026-02-07 23:39:41] 2026-02-08 04:38:49,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 23:39:41] 2026-02-08 04:38:49,951 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 23:39:41] 2026-02-08 04:38:49,951 | INFO     | update_server=False
[2026-02-07 23:39:41] 2026-02-08 04:38:49,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 23:39:41] 2026-02-08 04:38:49,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 23:39:41] 2026-02-08 04:38:50,039 | INFO     | all data control threads have been joined
[2026-02-07 23:39:41] 2026-02-08 04:38:50,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 23:39:41] 2026-02-08 04:38:50,420 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 23:39:41] 2026-02-08 04:38:50,420 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 23:39:41] 2026-02-08 04:38:50,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 23:39:41] 2026-02-08 04:38:50,421 | INFO     | will abort loop
[2026-02-07 23:39:41] 2026-02-08 04:38:50,708 | INFO     | all payload control threads have been joined
[2026-02-07 23:39:41] 2026-02-08 04:38:50,955 | INFO     | [job] retrieve thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:51,021 | INFO     | [data] copytool_in thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:51,045 | INFO     | [data] control thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:51,161 | INFO     | [job] queue monitor thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:51,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 23:39:41] 2026-02-08 04:38:51,209 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:51,415 | INFO     | all job control threads have been joined
[2026-02-07 23:39:41] 2026-02-08 04:38:51,426 | INFO     | [job] job monitor thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:51,722 | INFO     | [payload] control thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,321 | INFO     | [payload] validate_post thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,329 | INFO     | [payload] failed_post thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,394 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,398 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,402 | INFO     | [job] validate thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,422 | INFO     | [job] control thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:52,442 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:53,230 | INFO     | [data] copytool_out thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:38:53,974 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 23:39:41] 2026-02-08 04:39:21,736 | INFO     | PID=2089236 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 23:39:41] 2026-02-08 04:39:21,736 | INFO     | .. there are 80 such processes running
[2026-02-07 23:39:41] 2026-02-08 04:39:21,737 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 23:39:41] 2026-02-08 04:39:21,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 23:39:41] 2026-02-08 04:39:21,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 23:39:41] 2026-02-08 04:39:34,375 | INFO     | [monitor] cgroup control has ended
[2026-02-07 23:39:41] 2026-02-08 04:39:34,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622889011008)>', '<ExcThread(monitor, started 140622530868992)>']
[2026-02-07 23:39:41] 2026-02-08 04:39:35,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 23:39:41] 2026-02-08 04:39:35,828 | INFO     | [monitor] control thread has ended
[2026-02-07 23:39:41] 2026-02-08 04:39:39,893 | INFO     | all workflow threads have been joined
[2026-02-07 23:39:41] 2026-02-08 04:39:39,893 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 23:39:41] 2026-02-08 04:39:39,894 | INFO     | traces error code: 0
[2026-02-07 23:39:41] 2026-02-08 04:39:39,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 23:39:41] 2026-02-08 04:39:40,341 [wrapper] ==== pilot stdout END ====
[2026-02-07 23:39:41] 2026-02-08 04:39:40,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 23:39:41] 2026-02-08 04:39:40,346 [wrapper] pilotpid: 2089236
[2026-02-07 23:39:41] 2026-02-08 04:39:40,348 [wrapper] Pilot exit status: 0
[2026-02-07 23:39:41] 2026-02-08 04:39:40,385 [wrapper] pandaids: 7000740600
[2026-02-07 23:39:41] 2026-02-08 04:39:41,253 [wrapper] cleanup supervisor_pilot 1908124 2089237
[2026-02-07 23:39:41] 2026-02-08 04:39:41,288 [wrapper] Test setup, not cleaning
[2026-02-07 23:39:41] 2026-02-08 04:39:41,304 [wrapper] apfmon messages muted
[2026-02-07 23:39:41] 2026-02-08 04:39:41,323 [wrapper] ==== wrapper stdout END ====
[2026-02-07 23:39:41] 2026-02-08 04:39:41,346 [wrapper] ==== wrapper stderr END ====
[2026-02-07 23:39:41]  *** Error codes and diagnostics ***
[2026-02-07 23:39:41]     "exeErrorCode": 0,
[2026-02-07 23:39:41]     "exeErrorDiag": "",
[2026-02-07 23:39:41]     "pilotErrorCode": 0,
[2026-02-07 23:39:41]     "pilotErrorDiag": "",
[2026-02-07 23:39:41]  *** Listing of results directory ***
[2026-02-07 23:39:41] total 670628
[2026-02-07 23:39:41] -rwx------. 1 boincer umatlas     36322 Feb  7 08:37 runpilot2-wrapper.sh
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas    584627 Feb  7 08:39 pilot3.tar.gz
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas      5111 Feb  7 08:40 queuedata.json
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas       100 Feb  7 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 23:39:41] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 15:25 run_atlas
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas       105 Feb  7 15:25 job.xml
[2026-02-07 23:39:41] -rw-r--r--. 2 boincer umatlas 493479779 Feb  7 15:25 EVNT.48442027._000064.pool.root.1
[2026-02-07 23:39:41] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 15:25 start_atlas.sh
[2026-02-07 23:39:41] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 15:25 shared
[2026-02-07 23:39:41] -rw-r--r--. 2 boincer umatlas    597948 Feb  7 15:25 input.tar.gz
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas         0 Feb  7 15:25 boinc_lockfile
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas      2530 Feb  7 15:25 pandaJob.out
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas        57 Feb  7 15:25 setup.sh.local
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas   1009510 Feb  7 15:27 agis_schedconf.cvmfs.json
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas       441 Feb  7 15:27 workernode_map.json
[2026-02-07 23:39:41] drwx------. 5 boincer umatlas      4096 Feb  7 15:27 pilot3
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas 180977923 Feb  7 23:37 HITS.48442031._003241.pool.root.1
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas       532 Feb  7 23:37 boinc_task_state.xml
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas      1043 Feb  7 23:38 memory_monitor_summary.json
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas   1513088 Feb  7 23:38 agis_ddmendpoints.agis.ALL.json
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas    682501 Feb  7 23:38 log.48442031._003241.job.log.tgz.1
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas      6391 Feb  7 23:38 heartbeat.json
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas      6863 Feb  7 23:39 init_data.xml
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas        95 Feb  7 23:39 pilot_heartbeat.json
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas      5006 Feb  7 23:39 pilotlog.txt
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas        28 Feb  7 23:39 wrapper_checkpoint.txt
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas   3474003 Feb  7 23:39 log.48442031._003241.job.log.1
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas       357 Feb  7 23:39 output.list
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 23:39 boinc_mmap_file
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas       620 Feb  7 23:39 runtime_log
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas   4177920 Feb  7 23:39 result.tar.gz
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas      9342 Feb  7 23:39 runtime_log.err
[2026-02-07 23:39:41] -rw-------. 1 boincer umatlas       657 Feb  7 23:39 2XNODmqfx88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhUbKDmWi7jQn.diag
[2026-02-07 23:39:41] -rw-r--r--. 1 boincer umatlas     21256 Feb  7 23:39 stderr.txt
[2026-02-07 23:39:42] HITS file was successfully produced:
[2026-02-07 23:39:42] -rw-------. 1 boincer umatlas 180977923 Feb  7 23:37 shared/HITS.pool.root.1
[2026-02-07 23:39:42]  *** Contents of shared directory: ***
[2026-02-07 23:39:42] total 663344
[2026-02-07 23:39:42] -rw-r--r--. 2 boincer umatlas 493479779 Feb  7 15:25 ATLAS.root_0
[2026-02-07 23:39:42] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 15:25 start_atlas.sh
[2026-02-07 23:39:42] -rw-r--r--. 2 boincer umatlas    597948 Feb  7 15:25 input.tar.gz
[2026-02-07 23:39:42] -rw-------. 1 boincer umatlas 180977923 Feb  7 23:37 HITS.pool.root.1
[2026-02-07 23:39:42] -rw-------. 1 boincer umatlas   4177920 Feb  7 23:39 result.tar.gz
23:39:43 (2080142): run_atlas exited; CPU time 43997.815970
23:39:43 (2080142): called boinc_finish(0)

</stderr_txt>
]]>

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