Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:10:21 (23068): wrapper (7.7.26015): starting
15:10:21 (23068): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 15:10:21] Arguments: --nthreads 8
[2026-02-07 15:10:21] Threads: 8
[2026-02-07 15:10:21] Checking for CVMFS
[2026-02-07 15:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 15:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 15:10:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 15:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 15:10:22] 2.11.2.0 2964 67891 99368 155994 1 52 18599762 20275200 1 130560 0 16521553 99.748 6309520 26984 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 15:10:22] CVMFS is ok
[2026-02-07 15:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 15:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 15:10:22] Further information can be found at the LHC@home message board.
[2026-02-07 15:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 15:10:22] Checking for apptainer binary...
[2026-02-07 15:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 15:10:22] Running /usr/bin/apptainer --version
[2026-02-07 15:10:23] apptainer version 1.3.2-1.el7
[2026-02-07 15:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 15:10:24] c-204-16.aglt2.org
[2026-02-07 15:10:24] apptainer works
[2026-02-07 15:10:24] Set ATHENA_PROC_NUMBER=8
[2026-02-07 15:10:24] Set ATHENA_CORE_NUMBER=8
[2026-02-07 15:10:24] Starting ATLAS job with PandaID=7000833676
[2026-02-07 15:10:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 17:20:07]  *** The last 200 lines of the pilot log: ***
[2026-02-07 17:20:07] 2026-02-07 22:19:29,496 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7000833676/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,497 | INFO     | extracted standard info from prmon json
[2026-02-07 17:20:07] 2026-02-07 22:19:29,497 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 17:20:07] 2026-02-07 22:19:29,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 17:20:07] 2026-02-07 22:19:29,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 17:20:07] 2026-02-07 22:19:29,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 17:20:07] 2026-02-07 22:19:29,501 | INFO     | fitting pss+swap vs Time
[2026-02-07 17:20:07] 2026-02-07 22:19:29,501 | INFO     | sum of square deviations: 635130048.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,502 | INFO     | sum of deviations: 11177432905.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,502 | INFO     | mean x: 1770498918.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,502 | INFO     | mean y: 2464842.94488189
[2026-02-07 17:20:07] 2026-02-07 22:19:29,502 | INFO     | intersect: -31155930082.058094
[2026-02-07 17:20:07] 2026-02-07 22:19:29,502 | INFO     | chi2: 2.276776880908841
[2026-02-07 17:20:07] 2026-02-07 22:19:29,503 | INFO     | sum of square deviations: 563026370.5
[2026-02-07 17:20:07] 2026-02-07 22:19:29,503 | INFO     | sum of deviations: 19027466754.5
[2026-02-07 17:20:07] 2026-02-07 22:19:29,504 | INFO     | mean x: 1770498765.5
[2026-02-07 17:20:07] 2026-02-07 22:19:29,504 | INFO     | mean y: 2480879.3524590163
[2026-02-07 17:20:07] 2026-02-07 22:19:29,504 | INFO     | intersect: -59831495226.45152
[2026-02-07 17:20:07] 2026-02-07 22:19:29,504 | INFO     | chi2: 1.5063050076213653
[2026-02-07 17:20:07] 2026-02-07 22:19:29,504 | INFO     | current chi2=1.5063050076213653 (change=33.840464550918995 %)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,504 | INFO     | sum of square deviations: 496597218.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,505 | INFO     | sum of deviations: 18301677439.000027
[2026-02-07 17:20:07] 2026-02-07 22:19:29,505 | INFO     | mean x: 1770498613.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,505 | INFO     | mean y: 2479211.8376068375
[2026-02-07 17:20:07] 2026-02-07 22:19:29,505 | INFO     | intersect: -65247774609.203606
[2026-02-07 17:20:07] 2026-02-07 22:19:29,506 | INFO     | chi2: 1.5074257022314252
[2026-02-07 17:20:07] 2026-02-07 22:19:29,506 | INFO     | current chi2=1.5074257022314252 (change=-0.07440024459784772 %)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,506 | INFO     | right removable region: 116
[2026-02-07 17:20:07] 2026-02-07 22:19:29,506 | INFO     | sum of square deviations: 563026370.5
[2026-02-07 17:20:07] 2026-02-07 22:19:29,507 | INFO     | sum of deviations: -7634779611.500002
[2026-02-07 17:20:07] 2026-02-07 22:19:29,507 | INFO     | mean x: 1770499070.5
[2026-02-07 17:20:07] 2026-02-07 22:19:29,507 | INFO     | mean y: 2503908.0409836066
[2026-02-07 17:20:07] 2026-02-07 22:19:29,507 | INFO     | intersect: 24010917925.361164
[2026-02-07 17:20:07] 2026-02-07 22:19:29,507 | INFO     | chi2: 0.8573647615102896
[2026-02-07 17:20:07] 2026-02-07 22:19:29,507 | INFO     | current chi2=0.8573647615102896 (change=62.34304868872142 %)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,508 | INFO     | sum of square deviations: 496597218.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,508 | INFO     | sum of deviations: -10739639138.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,508 | INFO     | mean x: 1770499223.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,509 | INFO     | mean y: 2510883.9743589745
[2026-02-07 17:20:07] 2026-02-07 22:19:29,509 | INFO     | intersect: 38292138896.20658
[2026-02-07 17:20:07] 2026-02-07 22:19:29,509 | INFO     | chi2: 0.804074228376071
[2026-02-07 17:20:07] 2026-02-07 22:19:29,509 | INFO     | current chi2=0.804074228376071 (change=6.215619713637956 %)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,509 | INFO     | left removable region: 20
[2026-02-07 17:20:07] 2026-02-07 22:19:29,509 | INFO     | sum of square deviations: 274312120.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,510 | INFO     | sum of deviations: -2524125222.0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,510 | INFO     | mean x: 1770499192.5
[2026-02-07 17:20:07] 2026-02-07 22:19:29,510 | INFO     | mean y: 2531186.7916666665
[2026-02-07 17:20:07] 2026-02-07 22:19:29,510 | INFO     | intersect: 16294052200.59114
[2026-02-07 17:20:07] 2026-02-07 22:19:29,511 | INFO     | chi2: 0.0032511440093295624
[2026-02-07 17:20:07] 2026-02-07 22:19:29,511 | INFO     | current memory leak: -9.20 B/s (using 96 data points, chi2=0.00)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,511 | INFO     | could have reported an average CPU frequency of 1745 MHz (8 samples)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,511 | INFO     | ..............................
[2026-02-07 17:20:07] 2026-02-07 22:19:29,511 | INFO     | . Timing measurements:
[2026-02-07 17:20:07] 2026-02-07 22:19:29,511 | INFO     | . get job = 0 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | . initial setup = 8 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | . payload setup = 8 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | . stage-in = 0 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | . payload execution = 7694 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | . stage-out = 0 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | . log creation = 0 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,512 | INFO     | ..............................
[2026-02-07 17:20:07] 2026-02-07 22:19:29,701 | INFO     | 
[2026-02-07 17:20:07] 2026-02-07 22:19:29,701 | INFO     | job summary report
[2026-02-07 17:20:07] 2026-02-07 22:19:29,701 | INFO     | --------------------------------------------------
[2026-02-07 17:20:07] 2026-02-07 22:19:29,702 | INFO     | PanDA job id: 7000833676
[2026-02-07 17:20:07] 2026-02-07 22:19:29,702 | INFO     | task id: 48318042
[2026-02-07 17:20:07] 2026-02-07 22:19:29,702 | INFO     | errors: (none)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,702 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 17:20:07] 2026-02-07 22:19:29,702 | INFO     | pilot state: finished 
[2026-02-07 17:20:07] 2026-02-07 22:19:29,702 | INFO     | transexitcode: 0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,703 | INFO     | exeerrorcode: 0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,703 | INFO     | exeerrordiag: 
[2026-02-07 17:20:07] 2026-02-07 22:19:29,703 | INFO     | exitcode: 0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,703 | INFO     | exitmsg: OK
[2026-02-07 17:20:07] 2026-02-07 22:19:29,703 | INFO     | cpuconsumptiontime: 57348 s
[2026-02-07 17:20:07] 2026-02-07 22:19:29,704 | INFO     | nevents: 400
[2026-02-07 17:20:07] 2026-02-07 22:19:29,704 | INFO     | neventsw: 0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,704 | INFO     | pid: 31483
[2026-02-07 17:20:07] 2026-02-07 22:19:29,704 | INFO     | pgrp: 31483
[2026-02-07 17:20:07] 2026-02-07 22:19:29,704 | INFO     | corecount: 8
[2026-02-07 17:20:07] 2026-02-07 22:19:29,704 | INFO     | event service: False
[2026-02-07 17:20:07] 2026-02-07 22:19:29,705 | INFO     | sizes: {0: 2282898, 1: 2283104, 11: 2283132, 7706: 2310678, 7707: 2319676, 7708: 2319732, 7709: 2320054}
[2026-02-07 17:20:07] 2026-02-07 22:19:29,705 | INFO     | --------------------------------------------------
[2026-02-07 17:20:07] 2026-02-07 22:19:29,705 | INFO     | 
[2026-02-07 17:20:07] 2026-02-07 22:19:29,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 17:20:07] 2026-02-07 22:19:29,735 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,735 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,735 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,736 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,739 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 17:20:07] 2026-02-07 22:19:29,739 | INFO     | job 7000833676 has completed (purged errors)
[2026-02-07 17:20:07] 2026-02-07 22:19:29,739 | INFO     | overall cleanup function is called
[2026-02-07 17:20:07] 2026-02-07 22:19:30,747 | INFO     | --- collectZombieJob: --- 10, [31483]
[2026-02-07 17:20:07] 2026-02-07 22:19:30,747 | INFO     | zombie collector waiting for pid 31483
[2026-02-07 17:20:07] 2026-02-07 22:19:30,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 17:20:07] 2026-02-07 22:19:30,748 | INFO     | collected zombie processes
[2026-02-07 17:20:07] 2026-02-07 22:19:30,748 | INFO     | will attempt to kill all subprocesses of pid=31483
[2026-02-07 17:20:07] 2026-02-07 22:19:30,832 | INFO     | process IDs to be killed: [31483] (in reverse order)
[2026-02-07 17:20:07] 2026-02-07 22:19:30,893 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 17:20:07] 2026-02-07 22:19:30,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 17:20:07] 2026-02-07 22:19:30,897 | INFO     | did not find any defunct processes belonging to 31483
[2026-02-07 17:20:07] 2026-02-07 22:19:30,901 | INFO     | did not find any defunct processes belonging to 31483
[2026-02-07 17:20:07] 2026-02-07 22:19:30,901 | INFO     | ready for new job
[2026-02-07 17:20:07] 2026-02-07 22:19:30,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 17:20:07] 2026-02-07 22:19:30,903 | INFO     | **************************************
[2026-02-07 17:20:07] 2026-02-07 22:19:30,903 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 17:20:07] 2026-02-07 22:19:30,903 | INFO     | **************************************
[2026-02-07 17:20:07] 2026-02-07 22:19:30,904 | INFO     | 
[2026-02-07 17:20:07] 2026-02-07 22:19:30,904 | INFO     | architecture information:
[2026-02-07 17:20:07] 2026-02-07 22:19:30,905 | INFO     | executing command: cat /etc/os-release
[2026-02-07 17:20:07] 2026-02-07 22:19:30,923 | INFO     | cat /etc/os-release:
[2026-02-07 17:20:07] NAME="CentOS Linux"
[2026-02-07 17:20:07] VERSION="7 (Core)"
[2026-02-07 17:20:07] ID="centos"
[2026-02-07 17:20:07] ID_LIKE="rhel fedora"
[2026-02-07 17:20:07] VERSION_ID="7"
[2026-02-07 17:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 17:20:07] ANSI_COLOR="0;31"
[2026-02-07 17:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 17:20:07] HOME_URL="https://www.centos.org/"
[2026-02-07 17:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 17:20:07] 
[2026-02-07 17:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 17:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 17:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 17:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 17:20:07] 
[2026-02-07 17:20:07] 2026-02-07 22:19:30,923 | INFO     | **************************************
[2026-02-07 17:20:07] 2026-02-07 22:19:31,426 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 17:20:07] 2026-02-07 22:19:31,445 | INFO     | sufficient remaining disk space (18144559104 B)
[2026-02-07 17:20:07] 2026-02-07 22:19:31,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 17:20:07] 2026-02-07 22:19:31,446 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 17:20:07] 2026-02-07 22:19:31,447 | INFO     | update_server=False
[2026-02-07 17:20:07] 2026-02-07 22:19:31,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 17:20:07] 2026-02-07 22:19:31,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:20:07] 2026-02-07 22:19:31,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 17:20:07] 2026-02-07 22:19:31,757 | INFO     | all data control threads have been joined
[2026-02-07 17:20:07] 2026-02-07 22:19:31,757 | INFO     | all job control threads have been joined
[2026-02-07 17:20:07] 2026-02-07 22:19:32,449 | INFO     | [job] retrieve thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:32,453 | INFO     | [job] queue monitor thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:32,461 | INFO     | all payload control threads have been joined
[2026-02-07 17:20:07] 2026-02-07 22:19:32,515 | INFO     | [job] validate thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:32,763 | INFO     | [data] control thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:32,763 | INFO     | [job] control thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:32,780 | INFO     | [payload] validate_post thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,055 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,214 | INFO     | [data] copytool_in thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,217 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,248 | INFO     | [payload] failed_post thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,302 | WARNING  | process 31483 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 17:20:07] 2026-02-07 22:19:33,371 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 17:20:07] 2026-02-07 22:19:33,451 | INFO     | number of running child processes to parent process 31483: 1
[2026-02-07 17:20:07] 2026-02-07 22:19:33,452 | INFO     | maximum number of monitored processes: 6
[2026-02-07 17:20:07] 2026-02-07 22:19:33,452 | INFO     | aborting job monitoring since job object (job id=7000833676) has expired
[2026-02-07 17:20:07] 2026-02-07 22:19:33,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:20:07] 2026-02-07 22:19:33,452 | INFO     | will abort loop
[2026-02-07 17:20:07] 2026-02-07 22:19:33,453 | INFO     | [data] copytool_out thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,464 | INFO     | [payload] control thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:33,917 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:34,457 | INFO     | [job] job monitor thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:19:34,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 17:20:07] 2026-02-07 22:19:38,653 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 17:20:07] 2026-02-07 22:20:01,692 | INFO     | [monitor] cgroup control has ended
[2026-02-07 17:20:07] 2026-02-07 22:20:01,697 | INFO     | PID=27043 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 17:20:07] 2026-02-07 22:20:01,698 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 17:20:07] 2026-02-07 22:20:01,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 17:20:07] 2026-02-07 22:20:01,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 17:20:07] 2026-02-07 22:20:02,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249235855168)>', '<ExcThread(monitor, started 140248491206400)>']
[2026-02-07 17:20:07] 2026-02-07 22:20:02,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 17:20:07] 2026-02-07 22:20:02,704 | INFO     | [monitor] control thread has ended
[2026-02-07 17:20:07] 2026-02-07 22:20:07,117 | INFO     | all workflow threads have been joined
[2026-02-07 17:20:07] 2026-02-07 22:20:07,125 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 17:20:07] 2026-02-07 22:20:07,125 | INFO     | traces error code: 0
[2026-02-07 17:20:07] 2026-02-07 22:20:07,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 17:20:07] 2026-02-07 22:20:07,222 [wrapper] ==== pilot stdout END ====
[2026-02-07 17:20:07] 2026-02-07 22:20:07,227 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 17:20:07] 2026-02-07 22:20:07,231 [wrapper] pilotpid: 27043
[2026-02-07 17:20:07] 2026-02-07 22:20:07,236 [wrapper] Pilot exit status: 0
[2026-02-07 17:20:07] 2026-02-07 22:20:07,255 [wrapper] pandaids: 7000833676
[2026-02-07 17:20:07] 2026-02-07 22:20:07,299 [wrapper] cleanup supervisor_pilot 11588 27044
[2026-02-07 17:20:07] 2026-02-07 22:20:07,304 [wrapper] Test setup, not cleaning
[2026-02-07 17:20:07] 2026-02-07 22:20:07,309 [wrapper] apfmon messages muted
[2026-02-07 17:20:07] 2026-02-07 22:20:07,313 [wrapper] ==== wrapper stdout END ====
[2026-02-07 17:20:07] 2026-02-07 22:20:07,317 [wrapper] ==== wrapper stderr END ====
[2026-02-07 17:20:07]  *** Error codes and diagnostics ***
[2026-02-07 17:20:07]     "exeErrorCode": 0,
[2026-02-07 17:20:07]     "exeErrorDiag": "",
[2026-02-07 17:20:07]     "pilotErrorCode": 0,
[2026-02-07 17:20:07]     "pilotErrorDiag": "",
[2026-02-07 17:20:07]  *** Listing of results directory ***
[2026-02-07 17:20:07] total 668152
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 10:47 pilot3.tar.gz
[2026-02-07 17:20:07] -rwx------ 1 boincer umatlas     36322 Feb  7 10:48 runpilot2-wrapper.sh
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 10:48 queuedata.json
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas       100 Feb  7 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 17:20:07] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 15:10 run_atlas
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas       105 Feb  7 15:10 job.xml
[2026-02-07 17:20:07] -rw-r--r-- 2 boincer umatlas 497133276 Feb  7 15:10 EVNT.48318040._000217.pool.root.1
[2026-02-07 17:20:07] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 15:10 start_atlas.sh
[2026-02-07 17:20:07] drwxrwx--x 2 boincer umatlas      4096 Feb  7 15:10 shared
[2026-02-07 17:20:07] -rw-r--r-- 2 boincer umatlas    597948 Feb  7 15:10 input.tar.gz
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas         0 Feb  7 15:10 boinc_lockfile
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas      2537 Feb  7 15:10 pandaJob.out
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas        57 Feb  7 15:10 setup.sh.local
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas   1009502 Feb  7 15:10 agis_schedconf.cvmfs.json
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas   1513088 Feb  7 15:10 agis_ddmendpoints.agis.ALL.json
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas       432 Feb  7 15:10 workernode_map.json
[2026-02-07 17:20:07] drwx------ 5 boincer umatlas      4096 Feb  7 15:10 pilot3
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas      5910 Feb  7 17:11 init_data.xml
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas 180196516 Feb  7 17:18 HITS.48318042._011323.pool.root.1
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas       530 Feb  7 17:19 boinc_task_state.xml
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas      1049 Feb  7 17:19 memory_monitor_summary.json
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas    367530 Feb  7 17:19 log.48318042._011323.job.log.tgz.1
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas      6404 Feb  7 17:19 heartbeat.json
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas        27 Feb  7 17:19 wrapper_checkpoint.txt
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 17:19 boinc_mmap_file
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas        95 Feb  7 17:20 pilot_heartbeat.json
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas      5259 Feb  7 17:20 pilotlog.txt
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas   1090584 Feb  7 17:20 log.48318042._011323.job.log.1
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas       357 Feb  7 17:20 output.list
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas       620 Feb  7 17:20 runtime_log
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas   1474560 Feb  7 17:20 result.tar.gz
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas      9341 Feb  7 17:20 runtime_log.err
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas       658 Feb  7 17:20 ddsLDmSjz88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHYbKDmqRm86n.diag
[2026-02-07 17:20:07] -rw-r--r-- 1 boincer umatlas     21093 Feb  7 17:20 stderr.txt
[2026-02-07 17:20:07] HITS file was successfully produced:
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas 180196516 Feb  7 17:18 shared/HITS.pool.root.1
[2026-02-07 17:20:07]  *** Contents of shared directory: ***
[2026-02-07 17:20:07] total 663504
[2026-02-07 17:20:07] -rw-r--r-- 2 boincer umatlas 497133276 Feb  7 15:10 ATLAS.root_0
[2026-02-07 17:20:07] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 15:10 start_atlas.sh
[2026-02-07 17:20:07] -rw-r--r-- 2 boincer umatlas    597948 Feb  7 15:10 input.tar.gz
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas 180196516 Feb  7 17:18 HITS.pool.root.1
[2026-02-07 17:20:07] -rw------- 1 boincer umatlas   1474560 Feb  7 17:20 result.tar.gz
17:20:08 (23068): run_atlas exited; CPU time 57290.433513
17:20:08 (23068): called boinc_finish(0)

</stderr_txt>
]]>

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