Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:16:21 (3597782): wrapper (7.7.26015): starting
16:16:21 (3597782): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 16:16:21] Arguments: --nthreads 12
[2026-02-08 16:16:21] Threads: 12
[2026-02-08 16:16:21] Checking for CVMFS
[2026-02-08 16:16:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 16:16:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 16:16:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 16:16:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 16:16:21] 2.13.3.0 9156 4168 79484 156024 1 50 27583141 46080000 922 130560 0 4598776 99.994 148258 27029 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-08 16:16:21] CVMFS is ok
[2026-02-08 16:16:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 16:16:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 16:16:21] Further information can be found at the LHC@home message board.
[2026-02-08 16:16:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 16:16:21] Checking for apptainer binary...
[2026-02-08 16:16:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 16:16:21] Running /usr/bin/apptainer --version
[2026-02-08 16:16:22] apptainer version 1.4.5-2.el9
[2026-02-08 16:16:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 16:16:22] minis01.farm.particle.cz
[2026-02-08 16:16:22] apptainer works
[2026-02-08 16:16:22] Set ATHENA_PROC_NUMBER=12
[2026-02-08 16:16:22] Set ATHENA_CORE_NUMBER=12
[2026-02-08 16:16:22] Starting ATLAS job with PandaID=7000739825
[2026-02-08 16:16:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 17:08:45]  *** The last 200 lines of the pilot log: ***
[2026-02-08 17:08:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 17:08:45]  is_altstaged=None
[2026-02-08 17:08:45]  is_tar=False
[2026-02-08 17:08:45]  lfn=log.48442031._003020.job.log.tgz.1
[2026-02-08 17:08:45]  mtime=0
[2026-02-08 17:08:45]  protocol_id=None
[2026-02-08 17:08:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 17:08:45]  replicas=None
[2026-02-08 17:08:45]  scope=mc23_13p6TeV
[2026-02-08 17:08:45]  status=None
[2026-02-08 17:08:45]  status_code=0
[2026-02-08 17:08:45]  storage_token=
[2026-02-08 17:08:45]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-7000739825/log.48442031._003020.job.log.tgz.1
[2026-02-08 17:08:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/71/log.48442031._003020.job.log.tgz.1
[2026-02-08 17:08:45]  workdir=None
[2026-02-08 17:08:45] ]
[2026-02-08 17:08:45] 2026-02-08 16:07:45,600 | INFO     | transferring file log.48442031._003020.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-7000739825/log.48442031._003020.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-08 17:08:45] 2026-02-08 16:07:45,600 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-7000739825/log.48442031._003020.job.log.tgz.1 /var/lib/boinc/slots/0/log.48442031._003020.job
[2026-02-08 17:08:45] 2026-02-08 16:07:45,617 | INFO     | adding to output.list: log.48442031._003020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/71/log.48442031._003020.job.log.tg
[2026-02-08 17:08:45] 2026-02-08 16:07:45,618 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 17:08:45] 2026-02-08 16:07:45,618 | INFO     | summary of transferred files:
[2026-02-08 17:08:45] 2026-02-08 16:07:45,618 | INFO     |  -- lfn=log.48442031._003020.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 17:08:45] 2026-02-08 16:07:45,618 | INFO     | stage-out finished correctly
[2026-02-08 17:08:45] 2026-02-08 16:07:46,165 | INFO     | monitor loop #235: job 0:7000739825 is in state 'finished'
[2026-02-08 17:08:45] 2026-02-08 16:07:46,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 17:08:45] 2026-02-08 16:07:46,558 | INFO     | time since job start (3072s) is within the limit (349056.0s)
[2026-02-08 17:08:45] 2026-02-08 16:07:48,222 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 17:08:45] 2026-02-08 16:07:48,563 | INFO     | time since job start (3074s) is within the limit (349056.0s)
[2026-02-08 17:08:45] 2026-02-08 16:07:48,669 | INFO     | monitor loop #236: job 0:7000739825 is in state 'finished'
[2026-02-08 17:08:45] 2026-02-08 16:07:48,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 17:08:45] 2026-02-08 16:07:49,541 | INFO     | job 7000739825 has state=finished
[2026-02-08 17:08:45] 2026-02-08 16:07:49,542 | INFO     | preparing for final server update for job 7000739825 in state='finished'
[2026-02-08 17:08:45] 2026-02-08 16:07:50,098 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,098 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7000739825/jobReport.json
[2026-02-08 17:08:45] 2026-02-08 16:07:50,101 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-08 17:08:45] 2026-02-08 16:07:50,101 | INFO     | this job has now completed (state=finished)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,101 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,101 | INFO     | log transfer has been attempted: DONE
[2026-02-08 17:08:45] 2026-02-08 16:07:50,101 | INFO     | job 7000739825 has finished - writing final server update
[2026-02-08 17:08:45] 2026-02-08 16:07:50,102 | INFO     | total number of processed events: 400 (read)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,109 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7000739825/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,109 | INFO     | extracted standard info from prmon json
[2026-02-08 17:08:45] 2026-02-08 16:07:50,110 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 17:08:45] 2026-02-08 16:07:50,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 17:08:45] 2026-02-08 16:07:50,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 17:08:45] 2026-02-08 16:07:50,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 17:08:45] 2026-02-08 16:07:50,112 | INFO     | fitting pss+swap vs Time
[2026-02-08 17:08:45] 2026-02-08 16:07:50,112 | INFO     | sum of square deviations: 24640462.0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,112 | INFO     | sum of deviations: 197474202.00000015
[2026-02-08 17:08:45] 2026-02-08 16:07:50,112 | INFO     | mean x: 1770565401.0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,112 | INFO     | mean y: 3119641.0465116277
[2026-02-08 17:08:45] 2026-02-08 16:07:50,112 | INFO     | intersect: -14186589531.260618
[2026-02-08 17:08:45] 2026-02-08 16:07:50,113 | INFO     | chi2: 0.004276402108663507
[2026-02-08 17:08:45] 2026-02-08 16:07:50,113 | INFO     | current memory leak: 8.01 B/s (using 43 data points, chi2=0.00)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,113 | INFO     | could have reported an average CPU frequency of 2707 MHz (5 samples)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,113 | INFO     | ..............................
[2026-02-08 17:08:45] 2026-02-08 16:07:50,113 | INFO     | . Timing measurements:
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . get job = 0 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . initial setup = 5 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . payload setup = 5 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . stage-in = 0 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . payload execution = 3050 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . stage-out = 0 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | . log creation = 0 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,114 | INFO     | ..............................
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | 
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | job summary report
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | --------------------------------------------------
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | PanDA job id: 7000739825
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | task id: 48442031
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | errors: (none)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,187 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | pilot state: finished 
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | transexitcode: 0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | exeerrorcode: 0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | exeerrordiag: 
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | exitcode: 0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | exitmsg: OK
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | cpuconsumptiontime: 33280 s
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | nevents: 400
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | neventsw: 0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | pid: 3606286
[2026-02-08 17:08:45] 2026-02-08 16:07:50,188 | INFO     | pgrp: 3606286
[2026-02-08 17:08:45] 2026-02-08 16:07:50,189 | INFO     | corecount: 12
[2026-02-08 17:08:45] 2026-02-08 16:07:50,189 | INFO     | event service: False
[2026-02-08 17:08:45] 2026-02-08 16:07:50,189 | INFO     | sizes: {0: 2283043, 11: 2283043, 3059: 2308490, 3060: 2317488, 3062: 2317544, 3064: 2317770}
[2026-02-08 17:08:45] 2026-02-08 16:07:50,189 | INFO     | --------------------------------------------------
[2026-02-08 17:08:45] 2026-02-08 16:07:50,189 | INFO     | 
[2026-02-08 17:08:45] 2026-02-08 16:07:50,189 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-08 17:08:45] 2026-02-08 16:07:50,208 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,209 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,209 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,209 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,211 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,211 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 17:08:45] 2026-02-08 16:07:50,211 | INFO     | job 7000739825 has completed (purged errors)
[2026-02-08 17:08:45] 2026-02-08 16:07:50,211 | INFO     | overall cleanup function is called
[2026-02-08 17:08:45] 2026-02-08 16:07:51,221 | INFO     | --- collectZombieJob: --- 10, [3606286]
[2026-02-08 17:08:45] 2026-02-08 16:07:51,221 | INFO     | zombie collector waiting for pid 3606286
[2026-02-08 17:08:45] 2026-02-08 16:07:51,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 17:08:45] 2026-02-08 16:07:51,221 | INFO     | collected zombie processes
[2026-02-08 17:08:45] 2026-02-08 16:07:51,222 | INFO     | will attempt to kill all subprocesses of pid=3606286
[2026-02-08 17:08:45] 2026-02-08 16:07:51,363 | INFO     | process IDs to be killed: [3606286] (in reverse order)
[2026-02-08 17:08:45] 2026-02-08 16:07:51,416 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 17:08:45] 2026-02-08 16:07:51,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 17:08:45] 2026-02-08 16:07:51,420 | INFO     | did not find any defunct processes belonging to 3606286
[2026-02-08 17:08:45] 2026-02-08 16:07:51,425 | INFO     | did not find any defunct processes belonging to 3606286
[2026-02-08 17:08:45] 2026-02-08 16:07:51,425 | INFO     | ready for new job
[2026-02-08 17:08:45] 2026-02-08 16:07:51,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 17:08:45] 2026-02-08 16:07:51,426 | INFO     | **************************************
[2026-02-08 17:08:45] 2026-02-08 16:07:51,426 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 17:08:45] 2026-02-08 16:07:51,426 | INFO     | **************************************
[2026-02-08 17:08:45] 2026-02-08 16:07:51,426 | INFO     | 
[2026-02-08 17:08:45] 2026-02-08 16:07:51,428 | INFO     | architecture information:
[2026-02-08 17:08:45] 2026-02-08 16:07:51,428 | INFO     | executing command: cat /etc/os-release
[2026-02-08 17:08:45] 2026-02-08 16:07:51,442 | INFO     | cat /etc/os-release:
[2026-02-08 17:08:45] NAME="CentOS Linux"
[2026-02-08 17:08:45] VERSION="7 (Core)"
[2026-02-08 17:08:45] ID="centos"
[2026-02-08 17:08:45] ID_LIKE="rhel fedora"
[2026-02-08 17:08:45] VERSION_ID="7"
[2026-02-08 17:08:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 17:08:45] ANSI_COLOR="0;31"
[2026-02-08 17:08:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 17:08:45] HOME_URL="https://www.centos.org/"
[2026-02-08 17:08:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 17:08:45] 
[2026-02-08 17:08:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 17:08:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 17:08:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 17:08:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 17:08:45] 
[2026-02-08 17:08:45] 2026-02-08 16:07:51,442 | INFO     | **************************************
[2026-02-08 17:08:45] 2026-02-08 16:07:51,945 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-08 17:08:45] 2026-02-08 16:07:51,960 | INFO     | sufficient remaining disk space (50880053248 B)
[2026-02-08 17:08:45] 2026-02-08 16:07:51,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 17:08:45] 2026-02-08 16:07:51,960 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 17:08:45] 2026-02-08 16:07:51,960 | INFO     | update_server=False
[2026-02-08 17:08:45] 2026-02-08 16:07:51,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 17:08:45] 2026-02-08 16:07:51,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 17:08:45] 2026-02-08 16:07:51,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 17:08:45] 2026-02-08 16:07:51,994 | INFO     | all data control threads have been joined
[2026-02-08 17:08:45] 2026-02-08 16:07:52,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 17:08:45] 2026-02-08 16:07:52,178 | INFO     | aborting loop
[2026-02-08 17:08:45] 2026-02-08 16:07:52,585 | INFO     | all job control threads have been joined
[2026-02-08 17:08:45] 2026-02-08 16:07:52,966 | INFO     | [job] retrieve thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:52,967 | INFO     | [job] queue monitor thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,000 | INFO     | [data] control thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,077 | INFO     | all payload control threads have been joined
[2026-02-08 17:08:45] 2026-02-08 16:07:53,183 | INFO     | [job] job monitor thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,266 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,508 | INFO     | [job] validate thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,524 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,582 | INFO     | [payload] failed_post thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,586 | INFO     | [job] control thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,694 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,768 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,827 | INFO     | [data] copytool_in thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:53,967 | INFO     | [data] copytool_out thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:54,031 | INFO     | [payload] validate_post thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:54,082 | INFO     | [payload] control thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:07:54,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 17:08:45] 2026-02-08 16:07:58,302 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 17:08:45] 2026-02-08 16:08:21,835 | INFO     | PID=3601675 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 17:08:45] 2026-02-08 16:08:21,836 | INFO     | .. there are 2 such processes running
[2026-02-08 17:08:45] 2026-02-08 16:08:21,837 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 17:08:45] 2026-02-08 16:08:21,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 17:08:45] 2026-02-08 16:08:21,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 17:08:45] 2026-02-08 16:08:38,861 | INFO     | [monitor] cgroup control has ended
[2026-02-08 17:08:45] 2026-02-08 16:08:40,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564174014272)>', '<ExcThread(monitor, started 140563900024576)>']
[2026-02-08 17:08:45] 2026-02-08 16:08:40,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 17:08:45] 2026-02-08 16:08:40,933 | INFO     | [monitor] control thread has ended
[2026-02-08 17:08:45] 2026-02-08 16:08:45,425 | INFO     | all workflow threads have been joined
[2026-02-08 17:08:45] 2026-02-08 16:08:45,426 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 17:08:45] 2026-02-08 16:08:45,426 | INFO     | traces error code: 0
[2026-02-08 17:08:45] 2026-02-08 16:08:45,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 17:08:45] 2026-02-08 16:08:45,543 [wrapper] ==== pilot stdout END ====
[2026-02-08 17:08:45] 2026-02-08 16:08:45,546 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 17:08:45] 2026-02-08 16:08:45,548 [wrapper] pilotpid: 3601675
[2026-02-08 17:08:45] 2026-02-08 16:08:45,551 [wrapper] Pilot exit status: 0
[2026-02-08 17:08:45] 2026-02-08 16:08:45,561 [wrapper] pandaids: 7000739825
[2026-02-08 17:08:45] 2026-02-08 16:08:45,599 [wrapper] cleanup supervisor_pilot 3631532 3601676
[2026-02-08 17:08:45] 2026-02-08 16:08:45,602 [wrapper] Test setup, not cleaning
[2026-02-08 17:08:45] 2026-02-08 16:08:45,604 [wrapper] apfmon messages muted
[2026-02-08 17:08:45] 2026-02-08 16:08:45,607 [wrapper] ==== wrapper stdout END ====
[2026-02-08 17:08:45] 2026-02-08 16:08:45,609 [wrapper] ==== wrapper stderr END ====
[2026-02-08 17:08:45]  *** Error codes and diagnostics ***
[2026-02-08 17:08:45]     "exeErrorCode": 0,
[2026-02-08 17:08:45]     "exeErrorDiag": "",
[2026-02-08 17:08:45]     "pilotErrorCode": 0,
[2026-02-08 17:08:45]     "pilotErrorDiag": "",
[2026-02-08 17:08:45]  *** Listing of results directory ***
[2026-02-08 17:08:45] total 662452
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc    584627 Feb  7 12:17 pilot3.tar.gz
[2026-02-08 17:08:45] -rwx------. 1 boinc boinc     36322 Feb  7 12:20 runpilot2-wrapper.sh
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc      5111 Feb  7 12:24 queuedata.json
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc       100 Feb  8 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 17:08:45] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 16:16 run_atlas
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc       105 Feb  8 16:16 job.xml
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc      6522 Feb  8 16:16 init_data.xml
[2026-02-08 17:08:45] -rw-r--r--. 2 boinc boinc 491652872 Feb  8 16:16 EVNT.48442027._000060.pool.root.1
[2026-02-08 17:08:45] -rw-r--r--. 2 boinc boinc     15845 Feb  8 16:16 start_atlas.sh
[2026-02-08 17:08:45] drwxrwx--x. 2 boinc boinc      4096 Feb  8 16:16 shared
[2026-02-08 17:08:45] -rw-r--r--. 2 boinc boinc    597957 Feb  8 16:16 input.tar.gz
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc         0 Feb  8 16:16 boinc_lockfile
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc      2528 Feb  8 16:16 pandaJob.out
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc   1009488 Feb  8 16:16 agis_schedconf.cvmfs.json
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc   1513088 Feb  8 16:16 agis_ddmendpoints.agis.ALL.json
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc       426 Feb  8 16:16 workernode_map.json
[2026-02-08 17:08:45] drwx------. 5 boinc boinc      4096 Feb  8 16:16 pilot3
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc 181068584 Feb  8 17:07 HITS.48442031._003020.pool.root.1
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc       531 Feb  8 17:07 boinc_task_state.xml
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc      1014 Feb  8 17:07 memory_monitor_summary.json
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc    371245 Feb  8 17:07 log.48442031._003020.job.log.tgz.1
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc      6318 Feb  8 17:07 heartbeat.json
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc        95 Feb  8 17:08 pilot_heartbeat.json
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc      8192 Feb  8 17:08 boinc_mmap_file
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc        27 Feb  8 17:08 wrapper_checkpoint.txt
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc      4819 Feb  8 17:08 pilotlog.txt
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc    473769 Feb  8 17:08 log.48442031._003020.job.log.1
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc       357 Feb  8 17:08 output.list
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc       620 Feb  8 17:08 runtime_log
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc    860160 Feb  8 17:08 result.tar.gz
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc      8863 Feb  8 17:08 runtime_log.err
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc       662 Feb  8 17:08 6KZMDmAYv88n9Rq4apOajLDm4fhM0noT9bVooX4SDmmuaKDmZ7kCyn.diag
[2026-02-08 17:08:45] -rw-r--r--. 1 boinc boinc     21462 Feb  8 17:08 stderr.txt
[2026-02-08 17:08:45] HITS file was successfully produced:
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc 181068584 Feb  8 17:07 shared/HITS.pool.root.1
[2026-02-08 17:08:45]  *** Contents of shared directory: ***
[2026-02-08 17:08:45] total 658408
[2026-02-08 17:08:45] -rw-r--r--. 2 boinc boinc 491652872 Feb  8 16:16 ATLAS.root_0
[2026-02-08 17:08:45] -rw-r--r--. 2 boinc boinc     15845 Feb  8 16:16 start_atlas.sh
[2026-02-08 17:08:45] -rw-r--r--. 2 boinc boinc    597957 Feb  8 16:16 input.tar.gz
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc 181068584 Feb  8 17:07 HITS.pool.root.1
[2026-02-08 17:08:45] -rw-------. 1 boinc boinc    860160 Feb  8 17:08 result.tar.gz
17:08:47 (3597782): run_atlas exited; CPU time 33309.232935
17:08:47 (3597782): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN