Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
14:23:45 (1239450): wrapper (7.7.26015): starting
14:23:45 (1239450): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 14:23:45] Arguments: --nthreads 12
[2026-02-08 14:23:45] Threads: 12
[2026-02-08 14:23:45] Checking for CVMFS
[2026-02-08 14:23:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 14:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 14:23:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 14:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 14:23:46] 2.12.7.0 5195 2157 67012 156030 1 50 3204763 4194305 917 130560 0 2282755 99.993 73451 2231 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-08 14:23:46] CVMFS is ok
[2026-02-08 14:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 14:23:46] Checking for apptainer binary...
[2026-02-08 14:23:46] apptainer is not installed, using version from CVMFS
[2026-02-08 14:23:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 14:23:46] Trebeth
[2026-02-08 14:23:46] apptainer works
[2026-02-08 14:23:46] Set ATHENA_PROC_NUMBER=12
[2026-02-08 14:23:46] Set ATHENA_CORE_NUMBER=12
[2026-02-08 14:23:46] Starting ATLAS job with PandaID=7000833207
[2026-02-08 14:23:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 15:25:13]  *** The last 200 lines of the pilot log: ***
[2026-02-08 15:25:13]  guid=808b3004-bdf0-4876-a9c9-4cb19c2e0818
[2026-02-08 15:25:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 15:25:13]  is_altstaged=None
[2026-02-08 15:25:13]  is_tar=False
[2026-02-08 15:25:13]  lfn=log.48442098._004237.job.log.tgz.1
[2026-02-08 15:25:13]  mtime=0
[2026-02-08 15:25:13]  protocol_id=None
[2026-02-08 15:25:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 15:25:13]  replicas=None
[2026-02-08 15:25:13]  scope=mc23_13p6TeV
[2026-02-08 15:25:13]  status=None
[2026-02-08 15:25:13]  status_code=0
[2026-02-08 15:25:13]  storage_token=
[2026-02-08 15:25:13]  surl=/var/lib/boinc-client/slots/8/PanDA_Pilot-7000833207/log.48442098._004237.job.log.tgz.1
[2026-02-08 15:25:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/60/log.48442098._004237.job.log.tgz.1
[2026-02-08 15:25:13]  workdir=None
[2026-02-08 15:25:13] ]
[2026-02-08 15:25:13] 2026-02-08 20:24:21,381 | INFO     | transferring file log.48442098._004237.job.log.tgz.1 from /var/lib/boinc-client/slots/8/PanDA_Pilot-7000833207/log.48442098._004237.job.log.tgz.1 to /var/lib/boinc
[2026-02-08 15:25:13] 2026-02-08 20:24:21,381 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/8/PanDA_Pilot-7000833207/log.48442098._004237.job.log.tgz.1 /var/lib/boinc-client/slots/8/log.484420
[2026-02-08 15:25:13] 2026-02-08 20:24:21,395 | INFO     | adding to output.list: log.48442098._004237.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/60/log.48442098._004237.job.log.tg
[2026-02-08 15:25:13] 2026-02-08 20:24:21,397 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 15:25:13] 2026-02-08 20:24:21,397 | INFO     | summary of transferred files:
[2026-02-08 15:25:13] 2026-02-08 20:24:21,398 | INFO     |  -- lfn=log.48442098._004237.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 15:25:13] 2026-02-08 20:24:21,398 | INFO     | stage-out finished correctly
[2026-02-08 15:25:13] 2026-02-08 20:24:22,255 | INFO     | time since job start (3622s) is within the limit (349056.0s)
[2026-02-08 15:25:13] 2026-02-08 20:24:22,579 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 15:25:13] 2026-02-08 20:24:23,028 | INFO     | monitor loop #274: job 0:7000833207 is in state 'finished'
[2026-02-08 15:25:13] 2026-02-08 20:24:23,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,181 | INFO     | job 7000833207 has state=finished
[2026-02-08 15:25:13] 2026-02-08 20:24:23,181 | INFO     | preparing for final server update for job 7000833207 in state='finished'
[2026-02-08 15:25:13] 2026-02-08 20:24:23,182 | INFO     | reading metadata from: /var/lib/boinc-client/slots/8/PanDA_Pilot-7000833207/jobReport.json
[2026-02-08 15:25:13] 2026-02-08 20:24:23,184 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/8/workernode_map.json
[2026-02-08 15:25:13] 2026-02-08 20:24:23,184 | INFO     | this job has now completed (state=finished)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,184 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,184 | INFO     | log transfer has been attempted: DONE
[2026-02-08 15:25:13] 2026-02-08 20:24:23,185 | INFO     | job 7000833207 has finished - writing final server update
[2026-02-08 15:25:13] 2026-02-08 20:24:23,185 | INFO     | total number of processed events: 400 (read)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,213 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-7000833207/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,214 | INFO     | extracted standard info from prmon json
[2026-02-08 15:25:13] 2026-02-08 20:24:23,214 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 15:25:13] 2026-02-08 20:24:23,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 15:25:13] 2026-02-08 20:24:23,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 15:25:13] 2026-02-08 20:24:23,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 15:25:13] 2026-02-08 20:24:23,216 | INFO     | fitting pss+swap vs Time
[2026-02-08 15:25:13] 2026-02-08 20:24:23,216 | INFO     | sum of square deviations: 43584073.0
[2026-02-08 15:25:13] 2026-02-08 20:24:23,216 | INFO     | sum of deviations: -4219421636.5
[2026-02-08 15:25:13] 2026-02-08 20:24:23,217 | INFO     | mean x: 1770580520.5
[2026-02-08 15:25:13] 2026-02-08 20:24:23,217 | INFO     | mean y: 2977343.7115384615
[2026-02-08 15:25:13] 2026-02-08 20:24:23,217 | INFO     | intersect: 171414808389.4959
[2026-02-08 15:25:13] 2026-02-08 20:24:23,217 | INFO     | chi2: 0.12467465343773804
[2026-02-08 15:25:13] 2026-02-08 20:24:23,217 | INFO     | current memory leak: -96.81 B/s (using 52 data points, chi2=0.12)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,217 | INFO     | could have reported an average CPU frequency of 3102 MHz (6 samples)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | ..............................
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . Timing measurements:
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . get job = 0 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . initial setup = 5 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . payload setup = 4 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . stage-in = 0 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . payload execution = 3600 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . stage-out = 0 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | . log creation = 0 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,218 | INFO     | ..............................
[2026-02-08 15:25:13] 2026-02-08 20:24:23,302 | INFO     | 
[2026-02-08 15:25:13] 2026-02-08 20:24:23,302 | INFO     | job summary report
[2026-02-08 15:25:13] 2026-02-08 20:24:23,302 | INFO     | --------------------------------------------------
[2026-02-08 15:25:13] 2026-02-08 20:24:23,302 | INFO     | PanDA job id: 7000833207
[2026-02-08 15:25:13] 2026-02-08 20:24:23,302 | INFO     | task id: 48442098
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | errors: (none)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | pilot state: finished 
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | transexitcode: 0
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | exeerrorcode: 0
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | exeerrordiag: 
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | exitcode: 0
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | exitmsg: OK
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | cpuconsumptiontime: 37745 s
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | nevents: 400
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | neventsw: 0
[2026-02-08 15:25:13] 2026-02-08 20:24:23,303 | INFO     | pid: 1248668
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | pgrp: 1248668
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | corecount: 12
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | event service: False
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | sizes: {0: 2282838, 1: 2283100, 11: 2283128, 3608: 2308894, 3609: 2317961, 3610: 2317961, 3611: 2318283}
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | --------------------------------------------------
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | 
[2026-02-08 15:25:13] 2026-02-08 20:24:23,304 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2026-02-08 15:25:13] 2026-02-08 20:24:23,324 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,326 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 15:25:13] 2026-02-08 20:24:23,327 | INFO     | job 7000833207 has completed (purged errors)
[2026-02-08 15:25:13] 2026-02-08 20:24:23,327 | INFO     | overall cleanup function is called
[2026-02-08 15:25:13] 2026-02-08 20:24:24,336 | INFO     | --- collectZombieJob: --- 10, [1248668]
[2026-02-08 15:25:13] 2026-02-08 20:24:24,336 | INFO     | zombie collector waiting for pid 1248668
[2026-02-08 15:25:13] 2026-02-08 20:24:24,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 15:25:13] 2026-02-08 20:24:24,337 | INFO     | collected zombie processes
[2026-02-08 15:25:13] 2026-02-08 20:24:24,337 | INFO     | will attempt to kill all subprocesses of pid=1248668
[2026-02-08 15:25:13] 2026-02-08 20:24:24,528 | INFO     | process IDs to be killed: [1248668] (in reverse order)
[2026-02-08 15:25:13] 2026-02-08 20:24:24,591 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 15:25:13] 2026-02-08 20:24:24,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 15:25:13] 2026-02-08 20:24:24,598 | INFO     | did not find any defunct processes belonging to 1248668
[2026-02-08 15:25:13] 2026-02-08 20:24:24,603 | INFO     | did not find any defunct processes belonging to 1248668
[2026-02-08 15:25:13] 2026-02-08 20:24:24,603 | INFO     | ready for new job
[2026-02-08 15:25:13] 2026-02-08 20:24:24,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 15:25:13] 2026-02-08 20:24:24,605 | INFO     | **************************************
[2026-02-08 15:25:13] 2026-02-08 20:24:24,605 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 15:25:13] 2026-02-08 20:24:24,605 | INFO     | **************************************
[2026-02-08 15:25:13] 2026-02-08 20:24:24,605 | INFO     | 
[2026-02-08 15:25:13] 2026-02-08 20:24:24,625 | INFO     | architecture information:
[2026-02-08 15:25:13] 2026-02-08 20:24:24,626 | INFO     | executing command: cat /etc/os-release
[2026-02-08 15:25:13] 2026-02-08 20:24:24,636 | INFO     | cat /etc/os-release:
[2026-02-08 15:25:13] NAME="CentOS Linux"
[2026-02-08 15:25:13] VERSION="7 (Core)"
[2026-02-08 15:25:13] ID="centos"
[2026-02-08 15:25:13] ID_LIKE="rhel fedora"
[2026-02-08 15:25:13] VERSION_ID="7"
[2026-02-08 15:25:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 15:25:13] ANSI_COLOR="0;31"
[2026-02-08 15:25:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 15:25:13] HOME_URL="https://www.centos.org/"
[2026-02-08 15:25:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 15:25:13] 
[2026-02-08 15:25:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 15:25:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 15:25:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 15:25:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 15:25:13] 
[2026-02-08 15:25:13] 2026-02-08 20:24:24,636 | INFO     | **************************************
[2026-02-08 15:25:13] 2026-02-08 20:24:25,139 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2026-02-08 15:25:13] 2026-02-08 20:24:25,152 | INFO     | sufficient remaining disk space (373062369280 B)
[2026-02-08 15:25:13] 2026-02-08 20:24:25,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 15:25:13] 2026-02-08 20:24:25,153 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 15:25:13] 2026-02-08 20:24:25,153 | INFO     | update_server=False
[2026-02-08 15:25:13] 2026-02-08 20:24:25,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 15:25:13] 2026-02-08 20:24:25,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 15:25:13] 2026-02-08 20:24:25,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 15:25:13] 2026-02-08 20:24:25,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 15:25:13] 2026-02-08 20:24:25,180 | INFO     | all data control threads have been joined
[2026-02-08 15:25:13] 2026-02-08 20:24:25,531 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 15:25:13] 2026-02-08 20:24:25,532 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 15:25:13] 2026-02-08 20:24:25,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 15:25:13] 2026-02-08 20:24:25,532 | INFO     | will abort loop
[2026-02-08 15:25:13] 2026-02-08 20:24:25,740 | INFO     | all job control threads have been joined
[2026-02-08 15:25:13] 2026-02-08 20:24:26,156 | INFO     | [job] queue monitor thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,159 | INFO     | [job] retrieve thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,184 | INFO     | [data] control thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,214 | INFO     | all payload control threads have been joined
[2026-02-08 15:25:13] 2026-02-08 20:24:26,240 | INFO     | [payload] failed_post thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,537 | INFO     | [job] job monitor thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,564 | INFO     | [payload] validate_post thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,681 | INFO     | [job] validate thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,745 | INFO     | [job] control thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:26,956 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:27,020 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:27,156 | INFO     | [data] copytool_out thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:27,219 | INFO     | [payload] control thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:27,253 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:27,273 | INFO     | [data] copytool_in thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:29,156 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:35,664 | INFO     | job.realtimelogging is not enabled
[2026-02-08 15:25:13] 2026-02-08 20:24:36,668 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 15:25:13] 2026-02-08 20:24:55,543 | INFO     | PID=1243852 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 15:25:13] 2026-02-08 20:24:55,543 | INFO     | .. there are 2 such processes running
[2026-02-08 15:25:13] 2026-02-08 20:24:55,544 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 15:25:13] 2026-02-08 20:24:55,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 15:25:13] 2026-02-08 20:24:55,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 15:25:13] 2026-02-08 20:25:06,356 | INFO     | [monitor] cgroup control has ended
[2026-02-08 15:25:13] 2026-02-08 20:25:08,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410581604160)>', '<ExcThread(monitor, started 140409921595136)>']
[2026-02-08 15:25:13] 2026-02-08 20:25:08,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 15:25:13] 2026-02-08 20:25:08,596 | INFO     | [monitor] control thread has ended
[2026-02-08 15:25:13] 2026-02-08 20:25:13,154 | INFO     | all workflow threads have been joined
[2026-02-08 15:25:13] 2026-02-08 20:25:13,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 15:25:13] 2026-02-08 20:25:13,154 | INFO     | traces error code: 0
[2026-02-08 15:25:13] 2026-02-08 20:25:13,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 15:25:13] 2026-02-08 20:25:13,265 [wrapper] ==== pilot stdout END ====
[2026-02-08 15:25:13] 2026-02-08 20:25:13,267 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 15:25:13] 2026-02-08 20:25:13,268 [wrapper] pilotpid: 1243852
[2026-02-08 15:25:13] 2026-02-08 20:25:13,270 [wrapper] Pilot exit status: 0
[2026-02-08 15:25:13] 2026-02-08 20:25:13,277 [wrapper] pandaids: 7000833207
[2026-02-08 15:25:13] 2026-02-08 20:25:13,316 [wrapper] cleanup supervisor_pilot 1278990 1243853
[2026-02-08 15:25:13] 2026-02-08 20:25:13,319 [wrapper] Test setup, not cleaning
[2026-02-08 15:25:13] 2026-02-08 20:25:13,321 [wrapper] apfmon messages muted
[2026-02-08 15:25:13] 2026-02-08 20:25:13,323 [wrapper] ==== wrapper stdout END ====
[2026-02-08 15:25:13] 2026-02-08 20:25:13,325 [wrapper] ==== wrapper stderr END ====
[2026-02-08 15:25:13]  *** Error codes and diagnostics ***
[2026-02-08 15:25:13]     "exeErrorCode": 0,
[2026-02-08 15:25:13]     "exeErrorDiag": "",
[2026-02-08 15:25:13]     "pilotErrorCode": 0,
[2026-02-08 15:25:13]     "pilotErrorDiag": "",
[2026-02-08 15:25:13]  *** Listing of results directory ***
[2026-02-08 15:25:13] total 667532
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc    584627 Feb  7 08:33 pilot3.tar.gz
[2026-02-08 15:25:13] -rwx------ 1 boinc boinc     36322 Feb  7 08:34 runpilot2-wrapper.sh
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc      5111 Feb  7 08:36 queuedata.json
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc       100 Feb  8 14:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 15:25:13] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 14:23 run_atlas
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc       105 Feb  8 14:23 job.xml
[2026-02-08 15:25:13] -rw-r--r-- 2 boinc boinc 496100268 Feb  8 14:23 EVNT.48442096._000085.pool.root.1
[2026-02-08 15:25:13] -rw-r--r-- 2 boinc boinc     15845 Feb  8 14:23 start_atlas.sh
[2026-02-08 15:25:13] drwxrwx--x 2 boinc boinc      4096 Feb  8 14:23 shared
[2026-02-08 15:25:13] -rw-r--r-- 2 boinc boinc    597949 Feb  8 14:23 input.tar.gz
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc      7579 Feb  8 14:23 init_data.xml
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc         0 Feb  8 14:23 boinc_lockfile
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc      2528 Feb  8 14:23 pandaJob.out
[2026-02-08 15:25:13] -rw------- 1 boinc boinc        50 Feb  8 14:23 setup.sh.local
[2026-02-08 15:25:13] -rw------- 1 boinc boinc   1009496 Feb  8 14:23 agis_schedconf.cvmfs.json
[2026-02-08 15:25:13] -rw------- 1 boinc boinc   1513088 Feb  8 14:23 agis_ddmendpoints.agis.ALL.json
[2026-02-08 15:25:13] -rw------- 1 boinc boinc       429 Feb  8 14:23 workernode_map.json
[2026-02-08 15:25:13] drwx------ 5 boinc boinc      4096 Feb  8 14:24 pilot3
[2026-02-08 15:25:13] -rw------- 1 boinc boinc 181658568 Feb  8 15:23 HITS.48442098._004237.pool.root.1
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc       530 Feb  8 15:23 boinc_task_state.xml
[2026-02-08 15:25:13] -rw------- 1 boinc boinc      1030 Feb  8 15:24 memory_monitor_summary.json
[2026-02-08 15:25:13] -rw------- 1 boinc boinc    366265 Feb  8 15:24 log.48442098._004237.job.log.tgz.1
[2026-02-08 15:25:13] -rw------- 1 boinc boinc      6336 Feb  8 15:24 heartbeat.json
[2026-02-08 15:25:13] -rw------- 1 boinc boinc        95 Feb  8 15:24 pilot_heartbeat.json
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc      8192 Feb  8 15:25 boinc_mmap_file
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc        27 Feb  8 15:25 wrapper_checkpoint.txt
[2026-02-08 15:25:13] -rw------- 1 boinc boinc      5085 Feb  8 15:25 pilotlog.txt
[2026-02-08 15:25:13] -rw------- 1 boinc boinc    553044 Feb  8 15:25 log.48442098._004237.job.log.1
[2026-02-08 15:25:13] -rw------- 1 boinc boinc       357 Feb  8 15:25 output.list
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc       620 Feb  8 15:25 runtime_log
[2026-02-08 15:25:13] -rw------- 1 boinc boinc    942080 Feb  8 15:25 result.tar.gz
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc      9403 Feb  8 15:25 runtime_log.err
[2026-02-08 15:25:13] -rw------- 1 boinc boinc       650 Feb  8 15:25 e8oKDmLdx88n9Rq4apOajLDm4fhM0noT9bVooX4SDms4aKDmfBxCZn.diag
[2026-02-08 15:25:13] -rw-r--r-- 1 boinc boinc     21096 Feb  8 15:25 stderr.txt
[2026-02-08 15:25:13] HITS file was successfully produced:
[2026-02-08 15:25:13] -rw------- 1 boinc boinc 181658568 Feb  8 15:23 shared/HITS.pool.root.1
[2026-02-08 15:25:13]  *** Contents of shared directory: ***
[2026-02-08 15:25:13] total 663408
[2026-02-08 15:25:13] -rw-r--r-- 2 boinc boinc 496100268 Feb  8 14:23 ATLAS.root_0
[2026-02-08 15:25:13] -rw-r--r-- 2 boinc boinc     15845 Feb  8 14:23 start_atlas.sh
[2026-02-08 15:25:13] -rw-r--r-- 2 boinc boinc    597949 Feb  8 14:23 input.tar.gz
[2026-02-08 15:25:13] -rw------- 1 boinc boinc 181658568 Feb  8 15:23 HITS.pool.root.1
[2026-02-08 15:25:13] -rw------- 1 boinc boinc    942080 Feb  8 15:25 result.tar.gz
15:25:14 (1239450): run_atlas exited; CPU time 37800.986425
15:25:14 (1239450): called boinc_finish(0)

</stderr_txt>
]]>

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