Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:03 (3581310): wrapper (7.7.26015): starting
16:10:03 (3581310): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 16:10:03] Arguments: --nthreads 12
[2026-02-08 16:10:03] Threads: 12
[2026-02-08 16:10:03] Checking for CVMFS
[2026-02-08 16:10:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 16:10:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 16:10:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 16:10:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 16:10:03] 2.13.3.0 9156 4162 79260 156023 3 52 27580142 46080000 922 130560 0 4559097 99.994 146921 27052 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-08 16:10:03] CVMFS is ok
[2026-02-08 16:10:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 16:10:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 16:10:03] Further information can be found at the LHC@home message board.
[2026-02-08 16:10:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 16:10:03] Checking for apptainer binary...
[2026-02-08 16:10:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 16:10:03] Running /usr/bin/apptainer --version
[2026-02-08 16:10:03] apptainer version 1.4.5-2.el9
[2026-02-08 16:10:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 16:10:03] minis01.farm.particle.cz
[2026-02-08 16:10:03] apptainer works
[2026-02-08 16:10:03] Set ATHENA_PROC_NUMBER=12
[2026-02-08 16:10:03] Set ATHENA_CORE_NUMBER=12
[2026-02-08 16:10:03] Starting ATLAS job with PandaID=7000144955
[2026-02-08 16:10:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 17:03:25]  *** The last 200 lines of the pilot log: ***
[2026-02-08 17:03:25]  is_tar=False
[2026-02-08 17:03:25]  lfn=log.48466714._001359.job.log.tgz.1
[2026-02-08 17:03:25]  mtime=0
[2026-02-08 17:03:25]  protocol_id=None
[2026-02-08 17:03:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 17:03:25]  replicas=None
[2026-02-08 17:03:25]  scope=mc23_13p6TeV
[2026-02-08 17:03:25]  status=None
[2026-02-08 17:03:25]  status_code=0
[2026-02-08 17:03:25]  storage_token=
[2026-02-08 17:03:25]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-7000144955/log.48466714._001359.job.log.tgz.1
[2026-02-08 17:03:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/78/log.48466714._001359.job.log.tgz.1
[2026-02-08 17:03:25]  workdir=None
[2026-02-08 17:03:25] ]
[2026-02-08 17:03:25] 2026-02-08 16:02:31,685 | INFO     | transferring file log.48466714._001359.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-7000144955/log.48466714._001359.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-08 17:03:25] 2026-02-08 16:02:31,685 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-7000144955/log.48466714._001359.job.log.tgz.1 /var/lib/boinc/slots/3/log.48466714._001359.job
[2026-02-08 17:03:25] 2026-02-08 16:02:31,702 | INFO     | adding to output.list: log.48466714._001359.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/78/log.48466714._001359.job.log.tg
[2026-02-08 17:03:25] 2026-02-08 16:02:31,702 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 17:03:25] 2026-02-08 16:02:31,702 | INFO     | summary of transferred files:
[2026-02-08 17:03:25] 2026-02-08 16:02:31,702 | INFO     |  -- lfn=log.48466714._001359.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 17:03:25] 2026-02-08 16:02:31,703 | INFO     | stage-out finished correctly
[2026-02-08 17:03:25] 2026-02-08 16:02:32,749 | INFO     | monitor loop #239: job 0:7000144955 is in state 'finished'
[2026-02-08 17:03:25] 2026-02-08 16:02:32,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 17:03:25] 2026-02-08 16:02:32,852 | INFO     | time since job start (3136s) is within the limit (349056.0s)
[2026-02-08 17:03:25] 2026-02-08 16:02:32,881 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 17:03:25] 2026-02-08 16:02:34,857 | INFO     | time since job start (3138s) is within the limit (349056.0s)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,252 | INFO     | monitor loop #240: job 0:7000144955 is in state 'finished'
[2026-02-08 17:03:25] 2026-02-08 16:02:35,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,355 | INFO     | job 7000144955 has state=finished
[2026-02-08 17:03:25] 2026-02-08 16:02:35,355 | INFO     | preparing for final server update for job 7000144955 in state='finished'
[2026-02-08 17:03:25] 2026-02-08 16:02:35,355 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-7000144955/jobReport.json
[2026-02-08 17:03:25] 2026-02-08 16:02:35,358 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-02-08 17:03:25] 2026-02-08 16:02:35,358 | INFO     | this job has now completed (state=finished)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,359 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,359 | INFO     | log transfer has been attempted: DONE
[2026-02-08 17:03:25] 2026-02-08 16:02:35,359 | INFO     | job 7000144955 has finished - writing final server update
[2026-02-08 17:03:25] 2026-02-08 16:02:35,359 | INFO     | total number of processed events: 400 (read)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,366 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7000144955/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,367 | INFO     | extracted standard info from prmon json
[2026-02-08 17:03:25] 2026-02-08 16:02:35,367 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 17:03:25] 2026-02-08 16:02:35,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 17:03:25] 2026-02-08 16:02:35,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 17:03:25] 2026-02-08 16:02:35,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 17:03:25] 2026-02-08 16:02:35,369 | INFO     | fitting pss+swap vs Time
[2026-02-08 17:03:25] 2026-02-08 16:02:35,369 | INFO     | sum of square deviations: 26400495.0
[2026-02-08 17:03:25] 2026-02-08 16:02:35,369 | INFO     | sum of deviations: 559564803.5000001
[2026-02-08 17:03:25] 2026-02-08 16:02:35,370 | INFO     | mean x: 1770565053.5
[2026-02-08 17:03:25] 2026-02-08 16:02:35,370 | INFO     | mean y: 2718559.340909091
[2026-02-08 17:03:25] 2026-02-08 16:02:35,370 | INFO     | intersect: -37524831065.985985
[2026-02-08 17:03:25] 2026-02-08 16:02:35,370 | INFO     | chi2: 0.00015606523748206704
[2026-02-08 17:03:25] 2026-02-08 16:02:35,370 | INFO     | current memory leak: 21.20 B/s (using 44 data points, chi2=0.00)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | could have reported an average CPU frequency of 2703 MHz (5 samples)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | ..............................
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | . Timing measurements:
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | . get job = 0 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | . initial setup = 4 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | . payload setup = 5 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | . stage-in = 0 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,371 | INFO     | . payload execution = 3114 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,372 | INFO     | . stage-out = 0 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,372 | INFO     | . log creation = 0 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,372 | INFO     | ..............................
[2026-02-08 17:03:25] 2026-02-08 16:02:35,685 | INFO     | 
[2026-02-08 17:03:25] 2026-02-08 16:02:35,685 | INFO     | job summary report
[2026-02-08 17:03:25] 2026-02-08 16:02:35,685 | INFO     | --------------------------------------------------
[2026-02-08 17:03:25] 2026-02-08 16:02:35,685 | INFO     | PanDA job id: 7000144955
[2026-02-08 17:03:25] 2026-02-08 16:02:35,685 | INFO     | task id: 48466714
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | errors: (none)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | pilot state: finished 
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | transexitcode: 0
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | exeerrorcode: 0
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | exeerrordiag: 
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | exitcode: 0
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | exitmsg: OK
[2026-02-08 17:03:25] 2026-02-08 16:02:35,686 | INFO     | cpuconsumptiontime: 34605 s
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | nevents: 400
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | neventsw: 0
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | pid: 3590548
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | pgrp: 3590548
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | corecount: 12
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | event service: False
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | sizes: {0: 2282514, 1: 2283031, 11: 2283031, 3123: 2308473, 3125: 2317471, 3126: 2317527, 3128: 2317881}
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | --------------------------------------------------
[2026-02-08 17:03:25] 2026-02-08 16:02:35,687 | INFO     | 
[2026-02-08 17:03:25] 2026-02-08 16:02:35,688 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-02-08 17:03:25] 2026-02-08 16:02:35,707 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,707 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,707 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,709 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 17:03:25] 2026-02-08 16:02:35,710 | INFO     | job 7000144955 has completed (purged errors)
[2026-02-08 17:03:25] 2026-02-08 16:02:35,710 | INFO     | overall cleanup function is called
[2026-02-08 17:03:25] 2026-02-08 16:02:36,719 | INFO     | --- collectZombieJob: --- 10, [3590548]
[2026-02-08 17:03:25] 2026-02-08 16:02:36,719 | INFO     | zombie collector waiting for pid 3590548
[2026-02-08 17:03:25] 2026-02-08 16:02:36,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 17:03:25] 2026-02-08 16:02:36,720 | INFO     | collected zombie processes
[2026-02-08 17:03:25] 2026-02-08 16:02:36,720 | INFO     | will attempt to kill all subprocesses of pid=3590548
[2026-02-08 17:03:25] 2026-02-08 16:02:36,871 | INFO     | process IDs to be killed: [3590548] (in reverse order)
[2026-02-08 17:03:25] 2026-02-08 16:02:36,921 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 17:03:25] 2026-02-08 16:02:36,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 17:03:25] 2026-02-08 16:02:36,926 | INFO     | did not find any defunct processes belonging to 3590548
[2026-02-08 17:03:25] 2026-02-08 16:02:36,930 | INFO     | did not find any defunct processes belonging to 3590548
[2026-02-08 17:03:25] 2026-02-08 16:02:36,931 | INFO     | ready for new job
[2026-02-08 17:03:25] 2026-02-08 16:02:36,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 17:03:25] 2026-02-08 16:02:36,932 | INFO     | **************************************
[2026-02-08 17:03:25] 2026-02-08 16:02:36,932 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 17:03:25] 2026-02-08 16:02:36,932 | INFO     | **************************************
[2026-02-08 17:03:25] 2026-02-08 16:02:36,932 | INFO     | 
[2026-02-08 17:03:25] 2026-02-08 16:02:36,934 | INFO     | architecture information:
[2026-02-08 17:03:25] 2026-02-08 16:02:36,934 | INFO     | executing command: cat /etc/os-release
[2026-02-08 17:03:25] 2026-02-08 16:02:36,947 | INFO     | cat /etc/os-release:
[2026-02-08 17:03:25] NAME="CentOS Linux"
[2026-02-08 17:03:25] VERSION="7 (Core)"
[2026-02-08 17:03:25] ID="centos"
[2026-02-08 17:03:25] ID_LIKE="rhel fedora"
[2026-02-08 17:03:25] VERSION_ID="7"
[2026-02-08 17:03:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 17:03:25] ANSI_COLOR="0;31"
[2026-02-08 17:03:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 17:03:25] HOME_URL="https://www.centos.org/"
[2026-02-08 17:03:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 17:03:25] 
[2026-02-08 17:03:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 17:03:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 17:03:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 17:03:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 17:03:25] 
[2026-02-08 17:03:25] 2026-02-08 16:02:36,947 | INFO     | **************************************
[2026-02-08 17:03:25] 2026-02-08 16:02:37,450 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-02-08 17:03:25] 2026-02-08 16:02:37,465 | INFO     | sufficient remaining disk space (50640977920 B)
[2026-02-08 17:03:25] 2026-02-08 16:02:37,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 17:03:25] 2026-02-08 16:02:37,466 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 17:03:25] 2026-02-08 16:02:37,466 | INFO     | update_server=False
[2026-02-08 17:03:25] 2026-02-08 16:02:37,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 17:03:25] 2026-02-08 16:02:37,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 17:03:25] 2026-02-08 16:02:37,755 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 17:03:25] 2026-02-08 16:02:37,756 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 17:03:25] 2026-02-08 16:02:37,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 17:03:25] 2026-02-08 16:02:37,756 | INFO     | will abort loop
[2026-02-08 17:03:25] 2026-02-08 16:02:37,832 | INFO     | all data control threads have been joined
[2026-02-08 17:03:25] 2026-02-08 16:02:37,903 | INFO     | all job control threads have been joined
[2026-02-08 17:03:25] 2026-02-08 16:02:38,303 | INFO     | all payload control threads have been joined
[2026-02-08 17:03:25] 2026-02-08 16:02:38,471 | INFO     | [job] retrieve thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,477 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,520 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,602 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,761 | INFO     | [job] job monitor thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,838 | INFO     | [data] copytool_in thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,838 | INFO     | [data] control thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,908 | INFO     | [job] control thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:38,966 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 17:03:25] 2026-02-08 16:02:39,189 | INFO     | [payload] validate_post thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:39,308 | INFO     | [payload] control thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:39,328 | INFO     | [payload] failed_post thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:39,472 | INFO     | [data] copytool_out thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:39,807 | INFO     | [job] validate thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:40,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 17:03:25] 2026-02-08 16:02:41,465 | INFO     | [job] queue monitor thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:42,972 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:02:47,548 | INFO     | job.realtimelogging is not enabled
[2026-02-08 17:03:25] 2026-02-08 16:02:48,553 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 17:03:25] 2026-02-08 16:03:08,111 | INFO     | PID=3585200 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 17:03:25] 2026-02-08 16:03:08,112 | INFO     | .. there are 2 such processes running
[2026-02-08 17:03:25] 2026-02-08 16:03:08,112 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 17:03:25] 2026-02-08 16:03:08,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 17:03:25] 2026-02-08 16:03:08,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 17:03:25] 2026-02-08 16:03:20,344 | INFO     | [monitor] cgroup control has ended
[2026-02-08 17:03:25] 2026-02-08 16:03:20,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669083617088)>', '<ExcThread(monitor, started 140668726912768)>']
[2026-02-08 17:03:25] 2026-02-08 16:03:21,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 17:03:25] 2026-02-08 16:03:21,179 | INFO     | [monitor] control thread has ended
[2026-02-08 17:03:25] 2026-02-08 16:03:25,592 | INFO     | all workflow threads have been joined
[2026-02-08 17:03:25] 2026-02-08 16:03:25,592 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 17:03:25] 2026-02-08 16:03:25,593 | INFO     | traces error code: 0
[2026-02-08 17:03:25] 2026-02-08 16:03:25,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 17:03:25] 2026-02-08 16:03:25,704 [wrapper] ==== pilot stdout END ====
[2026-02-08 17:03:25] 2026-02-08 16:03:25,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 17:03:25] 2026-02-08 16:03:25,709 [wrapper] pilotpid: 3585200
[2026-02-08 17:03:25] 2026-02-08 16:03:25,712 [wrapper] Pilot exit status: 0
[2026-02-08 17:03:25] 2026-02-08 16:03:25,722 [wrapper] pandaids: 7000144955
[2026-02-08 17:03:25] 2026-02-08 16:03:25,761 [wrapper] cleanup supervisor_pilot 3629199 3585201
[2026-02-08 17:03:25] 2026-02-08 16:03:25,764 [wrapper] Test setup, not cleaning
[2026-02-08 17:03:25] 2026-02-08 16:03:25,767 [wrapper] apfmon messages muted
[2026-02-08 17:03:25] 2026-02-08 16:03:25,769 [wrapper] ==== wrapper stdout END ====
[2026-02-08 17:03:25] 2026-02-08 16:03:25,772 [wrapper] ==== wrapper stderr END ====
[2026-02-08 17:03:25]  *** Error codes and diagnostics ***
[2026-02-08 17:03:25]     "exeErrorCode": 0,
[2026-02-08 17:03:25]     "exeErrorDiag": "",
[2026-02-08 17:03:25]     "pilotErrorCode": 0,
[2026-02-08 17:03:25]     "pilotErrorDiag": "",
[2026-02-08 17:03:25]  *** Listing of results directory ***
[2026-02-08 17:03:25] total 716060
[2026-02-08 17:03:25] -rwx------. 1 boinc boinc     36322 Feb  7 06:44 runpilot2-wrapper.sh
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc    584627 Feb  7 06:46 pilot3.tar.gz
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc      5111 Feb  7 06:48 queuedata.json
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc       100 Feb  8 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 17:03:25] -rwxr-xr-x. 1 boinc boinc      7986 Feb  8 16:10 run_atlas
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc       105 Feb  8 16:10 job.xml
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc      6522 Feb  8 16:10 init_data.xml
[2026-02-08 17:03:25] -rw-r--r--. 2 boinc boinc 530750395 Feb  8 16:10 EVNT.48466711._000028.pool.root.1
[2026-02-08 17:03:25] -rw-r--r--. 2 boinc boinc    597936 Feb  8 16:10 input.tar.gz
[2026-02-08 17:03:25] -rw-r--r--. 2 boinc boinc     15845 Feb  8 16:10 start_atlas.sh
[2026-02-08 17:03:25] drwxrwx--x. 2 boinc boinc      4096 Feb  8 16:10 shared
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc         0 Feb  8 16:10 boinc_lockfile
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc      2497 Feb  8 16:10 pandaJob.out
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc   1009496 Feb  8 16:10 agis_schedconf.cvmfs.json
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc   1513088 Feb  8 16:10 agis_ddmendpoints.agis.ALL.json
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc       435 Feb  8 16:10 workernode_map.json
[2026-02-08 17:03:25] drwx------. 5 boinc boinc      4096 Feb  8 16:10 pilot3
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc 196870258 Feb  8 17:02 HITS.48466714._001359.pool.root.1
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc       530 Feb  8 17:02 boinc_task_state.xml
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc      1017 Feb  8 17:02 memory_monitor_summary.json
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc    359231 Feb  8 17:02 log.48466714._001359.job.log.tgz.1
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc      6328 Feb  8 17:02 heartbeat.json
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc        95 Feb  8 17:03 pilot_heartbeat.json
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc      8192 Feb  8 17:03 boinc_mmap_file
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc        27 Feb  8 17:03 wrapper_checkpoint.txt
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc      5077 Feb  8 17:03 pilotlog.txt
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc    481345 Feb  8 17:03 log.48466714._001359.job.log.1
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc       357 Feb  8 17:03 output.list
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc       620 Feb  8 17:03 runtime_log
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc    860160 Feb  8 17:03 result.tar.gz
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc      8863 Feb  8 17:03 runtime_log.err
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc       662 Feb  8 17:03 rryLDmwIq88n9Rq4apOajLDm4fhM0noT9bVooX4SDmfXaKDmoiPjrm.diag
[2026-02-08 17:03:25] -rw-r--r--. 1 boinc boinc     21561 Feb  8 17:03 stderr.txt
[2026-02-08 17:03:25] HITS file was successfully produced:
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc 196870258 Feb  8 17:02 shared/HITS.pool.root.1
[2026-02-08 17:03:25]  *** Contents of shared directory: ***
[2026-02-08 17:03:25] total 712020
[2026-02-08 17:03:25] -rw-r--r--. 2 boinc boinc 530750395 Feb  8 16:10 ATLAS.root_0
[2026-02-08 17:03:25] -rw-r--r--. 2 boinc boinc    597936 Feb  8 16:10 input.tar.gz
[2026-02-08 17:03:25] -rw-r--r--. 2 boinc boinc     15845 Feb  8 16:10 start_atlas.sh
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc 196870258 Feb  8 17:02 HITS.pool.root.1
[2026-02-08 17:03:25] -rw-------. 1 boinc boinc    860160 Feb  8 17:03 result.tar.gz
17:03:27 (3581310): run_atlas exited; CPU time 34647.410350
17:03:27 (3581310): called boinc_finish(0)

</stderr_txt>
]]>

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