Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:27:53 (3629622): wrapper (7.7.26015): starting
07:27:53 (3629622): wrapper: running run_atlas (--nthreads 2)
[2026-02-08 07:27:53] Arguments: --nthreads 2
[2026-02-08 07:27:53] Threads: 2
[2026-02-08 07:27:53] Checking for CVMFS
[2026-02-08 07:27:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 07:27:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 07:27:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 07:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 07:27:54] 2.9.2.0 3340523 2974 56932 156010 0 49 28998344 36864000 0 130560 0 858249 99.976 116164 11924 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-08 07:27:54] CVMFS is ok
[2026-02-08 07:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 07:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 07:27:54] Further information can be found at the LHC@home message board.
[2026-02-08 07:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 07:27:54] Checking for apptainer binary...
[2026-02-08 07:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 07:27:54] Running /usr/bin/apptainer --version
[2026-02-08 07:27:54] apptainer version 1.4.1-1.1
[2026-02-08 07:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 07:27:54] thA315
[2026-02-08 07:27:54] apptainer works
[2026-02-08 07:27:54] Set ATHENA_PROC_NUMBER=2
[2026-02-08 07:27:54] Set ATHENA_CORE_NUMBER=2
[2026-02-08 07:27:54] Starting ATLAS job with PandaID=7000832698
[2026-02-08 07:27:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 10:19:37]  *** The last 200 lines of the pilot log: ***
[2026-02-08 10:19:37] 2026-02-08 09:18:54,490 | INFO     | [job] job monitor thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:54,503 | INFO     | [payload] validate_post thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:54,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 10:19:37] 2026-02-08 09:18:54,604 | INFO     | [data] control thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:54,750 | INFO     | [job] control thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:54,773 | INFO     | all payload control threads have been joined
[2026-02-08 10:19:37] 2026-02-08 09:18:55,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 10:19:37] 2026-02-08 09:18:55,350 | INFO     | [job] validate thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:55,383 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:55,542 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:55,638 | INFO     | [payload] failed_post thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:55,683 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:55,728 | INFO     | [data] copytool_in thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:55,779 | INFO     | [payload] control thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:56,527 | INFO     | [data] copytool_out thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:18:59,055 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:19:03,693 | INFO     | job.realtimelogging is not enabled
[2026-02-08 10:19:37] 2026-02-08 09:19:04,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 10:19:37] 2026-02-08 09:19:23,791 | INFO     | PID=3633648 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 10:19:37] 2026-02-08 09:19:23,791 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 10:19:37] 2026-02-08 09:19:23,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 10:19:37] 2026-02-08 09:19:23,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 10:19:37] 2026-02-08 09:19:31,075 | INFO     | [monitor] cgroup control has ended
[2026-02-08 10:19:37] 2026-02-08 09:19:31,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139853179705152)>', '<ExcThread(monitor, started 139852389545728)>']
[2026-02-08 10:19:37] 2026-02-08 09:19:31,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 10:19:37] 2026-02-08 09:19:31,835 | INFO     | [monitor] control thread has ended
[2026-02-08 10:19:37] 2026-02-08 09:19:36,590 | INFO     | all workflow threads have been joined
[2026-02-08 10:19:37] 2026-02-08 09:19:36,591 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 10:19:37] 2026-02-08 09:19:36,592 | INFO     | traces error code: 0
[2026-02-08 10:19:37] 2026-02-08 09:19:36,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 10:19:37] 2026-02-08 09:19:36,636 [wrapper] ==== pilot stdout END ====
[2026-02-08 10:19:37] 2026-02-08 09:19:36,639 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 10:19:37] 2026-02-08 09:19:36,641 [wrapper] pilotpid: 3633648
[2026-02-08 10:19:37] 2026-02-08 09:19:36,643 [wrapper] Pilot exit status: 0
[2026-02-08 10:19:37] 2026-02-08 09:19:36,649 [wrapper] pandaids: 7000832698
[2026-02-08 10:19:37] 2026-02-08 09:19:36,661 [wrapper] cleanup supervisor_pilot 3643347 3633649
[2026-02-08 10:19:37] 2026-02-08 09:19:36,663 [wrapper] Test setup, not cleaning
[2026-02-08 10:19:37] 2026-02-08 09:19:36,665 [wrapper] apfmon messages muted
[2026-02-08 10:19:37] 2026-02-08 09:19:36,667 [wrapper] ==== wrapper stdout END ====
[2026-02-08 10:19:37] 2026-02-08 09:19:36,669 [wrapper] ==== wrapper stderr END ====
[2026-02-08 10:19:37]  *** Error codes and diagnostics ***
[2026-02-08 10:19:37]     "exeErrorCode": 0,
[2026-02-08 10:19:37]     "exeErrorDiag": "",
[2026-02-08 10:19:37]     "pilotErrorCode": 0,
[2026-02-08 10:19:37]     "pilotErrorDiag": "",
[2026-02-08 10:19:37]  *** Listing of results directory ***
[2026-02-08 10:19:37] total 895496
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc    584627 Feb  7 14:33 pilot3.tar.gz
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc      5111 Feb  7 14:33 queuedata.json
[2026-02-08 10:19:37] -rwx------ 1 boinc boinc     36322 Feb  7 14:34 runpilot2-wrapper.sh
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc       100 Feb  8 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 10:19:37] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 07:27 run_atlas
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc       105 Feb  8 07:27 job.xml
[2026-02-08 10:19:37] -rw-r--r-- 2 boinc boinc 651819864 Feb  8 07:27 EVNT.48431111._000104.pool.root.1
[2026-02-08 10:19:37] -rw-r--r-- 2 boinc boinc    597955 Feb  8 07:27 input.tar.gz
[2026-02-08 10:19:37] -rw-r--r-- 2 boinc boinc     15845 Feb  8 07:27 start_atlas.sh
[2026-02-08 10:19:37] drwxrwx--x 2 boinc boinc      4096 Feb  8 07:27 shared
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc         0 Feb  8 07:27 boinc_setup_complete
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc      6206 Feb  8 07:27 init_data.xml
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc         0 Feb  8 07:27 boinc_lockfile
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc      2545 Feb  8 07:27 pandaJob.out
[2026-02-08 10:19:37] -rw------- 1 boinc boinc   1009510 Feb  8 07:28 agis_schedconf.cvmfs.json
[2026-02-08 10:19:37] -rw------- 1 boinc boinc   1513088 Feb  8 07:28 agis_ddmendpoints.agis.ALL.json
[2026-02-08 10:19:37] -rw------- 1 boinc boinc       425 Feb  8 07:28 workernode_map.json
[2026-02-08 10:19:37] drwx------ 5 boinc boinc      4096 Feb  8 07:28 pilot3
[2026-02-08 10:19:37] -rw------- 1 boinc boinc 257678401 Feb  8 10:18 HITS.48431113._005257.pool.root.1
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc       531 Feb  8 10:18 boinc_task_state.xml
[2026-02-08 10:19:37] -rw------- 1 boinc boinc      1015 Feb  8 10:18 memory_monitor_summary.json
[2026-02-08 10:19:37] -rw------- 1 boinc boinc    331182 Feb  8 10:18 log.48431113._005257.job.log.tgz.1
[2026-02-08 10:19:37] -rw------- 1 boinc boinc      6307 Feb  8 10:18 heartbeat.json
[2026-02-08 10:19:37] -rw------- 1 boinc boinc        95 Feb  8 10:19 pilot_heartbeat.json
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc      8192 Feb  8 10:19 boinc_mmap_file
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc        28 Feb  8 10:19 wrapper_checkpoint.txt
[2026-02-08 10:19:37] -rw------- 1 boinc boinc      4820 Feb  8 10:19 pilotlog.txt
[2026-02-08 10:19:37] -rw------- 1 boinc boinc   1454022 Feb  8 10:19 log.48431113._005257.job.log.1
[2026-02-08 10:19:37] -rw------- 1 boinc boinc       357 Feb  8 10:19 output.list
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc       620 Feb  8 10:19 runtime_log
[2026-02-08 10:19:37] -rw------- 1 boinc boinc   1802240 Feb  8 10:19 result.tar.gz
[2026-02-08 10:19:37] -rw------- 1 boinc boinc       659 Feb  8 10:19 ytMKDmxcx88n9Rq4apOajLDm4fhM0noT9bVooX4SDmy1aKDmz9Ohmn.diag
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc      8897 Feb  8 10:19 runtime_log.err
[2026-02-08 10:19:37] -rw-r--r-- 1 boinc boinc      6566 Feb  8 10:19 stderr.txt
[2026-02-08 10:19:37] HITS file was successfully produced:
[2026-02-08 10:19:37] -rw------- 1 boinc boinc 257678401 Feb  8 10:18 shared/HITS.pool.root.1
[2026-02-08 10:19:37]  *** Contents of shared directory: ***
[2026-02-08 10:19:37] total 890552
[2026-02-08 10:19:37] -rw-r--r-- 2 boinc boinc 651819864 Feb  8 07:27 ATLAS.root_0
[2026-02-08 10:19:37] -rw-r--r-- 2 boinc boinc    597955 Feb  8 07:27 input.tar.gz
[2026-02-08 10:19:37] -rw-r--r-- 2 boinc boinc     15845 Feb  8 07:27 start_atlas.sh
[2026-02-08 10:19:37] -rw------- 1 boinc boinc 257678401 Feb  8 10:18 HITS.pool.root.1
[2026-02-08 10:19:37] -rw------- 1 boinc boinc   1802240 Feb  8 10:19 result.tar.gz
10:19:38 (3629622): run_atlas exited; CPU time 20032.923647
10:19:38 (3629622): called boinc_finish(0)

</stderr_txt>
]]>

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