Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:47:05 (3213715): wrapper (7.7.26015): starting
23:47:05 (3213715): wrapper: running run_atlas (--nthreads 3)
[2026-02-07 23:47:05] Arguments: --nthreads 3
[2026-02-07 23:47:05] Threads: 3
[2026-02-07 23:47:05] Checking for CVMFS
[2026-02-07 23:47:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 23:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 23:47:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 23:47:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 23:47:06] 2.9.2.0 2902838 2297 63796 155998 0 50 22768410 36864000 0 130560 0 885909 99.981 89047 16128 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 23:47:06] CVMFS is ok
[2026-02-07 23:47:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 23:47:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 23:47:06] Further information can be found at the LHC@home message board.
[2026-02-07 23:47:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 23:47:06] Checking for apptainer binary...
[2026-02-07 23:47:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 23:47:06] Running /usr/bin/apptainer --version
[2026-02-07 23:47:06] apptainer version 1.3.6-6.1
[2026-02-07 23:47:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 23:47:06] atlasA226
[2026-02-07 23:47:06] apptainer works
[2026-02-07 23:47:06] Set ATHENA_PROC_NUMBER=3
[2026-02-07 23:47:06] Set ATHENA_CORE_NUMBER=3
[2026-02-07 23:47:07] Starting ATLAS job with PandaID=7000832694
[2026-02-07 23:47:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 01:53:35]  *** The last 200 lines of the pilot log: ***
[2026-02-08 01:53:35] 2026-02-08 00:52:56,447 | INFO     | job 7000832694 has finished - writing final server update
[2026-02-08 01:53:35] 2026-02-08 00:52:56,447 | INFO     | total number of processed events: 400 (read)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,448 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7000832694/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,448 | INFO     | extracted standard info from prmon json
[2026-02-08 01:53:35] 2026-02-08 00:52:56,448 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 01:53:35] 2026-02-08 00:52:56,449 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 01:53:35] 2026-02-08 00:52:56,449 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 01:53:35] 2026-02-08 00:52:56,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 01:53:35] 2026-02-08 00:52:56,449 | INFO     | fitting pss+swap vs Time
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | sum of square deviations: 591173875.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | sum of deviations: -7200434601.5
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | mean x: 1770508212.5
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | mean y: 2386001.39516129
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | intersect: 21566986763.776474
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | chi2: 2.2310318282213455
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | sum of square deviations: 522502820.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | sum of deviations: 289783245.0000008
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | mean x: 1770508060.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | mean y: 2402122.6218487397
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | intersect: -979532426.4116973
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | chi2: 1.6046401060293611
[2026-02-08 01:53:35] 2026-02-08 00:52:56,450 | INFO     | current chi2=1.6046401060293611 (change=28.07632389051864 %)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | sum of square deviations: 459366752.5
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | sum of deviations: 569008427.0000002
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | mean x: 1770507907.5
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | mean y: 2402797.4210526315
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | intersect: -2190690006.868559
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | chi2: 1.6063359119478826
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | current chi2=1.6063359119478826 (change=-0.10568138688230234 %)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | right removable region: 113
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | sum of square deviations: 522502820.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | sum of deviations: -22989978290.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | mean x: 1770508365.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | mean y: 2420235.5210084035
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | intersect: 77904294283.99677
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | chi2: 0.7905343450829608
[2026-02-08 01:53:35] 2026-02-08 00:52:56,451 | INFO     | current chi2=0.7905343450829608 (change=64.56642459855887 %)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | sum of square deviations: 459366752.5
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | sum of deviations: -17227028910.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | mean x: 1770508517.5
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | mean y: 2406291.964912281
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | intersect: 66399465396.44101
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | chi2: 0.7582260300552944
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | current chi2=0.7582260300552944 (change=4.0868958102352755 %)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | left removable region: 20
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | sum of square deviations: 249388862.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | sum of deviations: -1809098960.0000002
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | mean x: 1770508487.0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | mean y: 2402078.0967741935
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | intersect: 12845898924.009943
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | chi2: 0.030681947845964213
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | current memory leak: -7.25 B/s (using 93 data points, chi2=0.03)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,452 | INFO     | could have reported an average CPU frequency of 4375 MHz (8 samples)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | ..............................
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . Timing measurements:
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . get job = 0 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . initial setup = 4 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . payload setup = 6 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . stage-in = 0 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . payload execution = 7511 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . stage-out = 0 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | . log creation = 0 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,453 | INFO     | ..............................
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | 
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | job summary report
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | --------------------------------------------------
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | PanDA job id: 7000832694
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | task id: 48431113
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | errors: (none)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | pilot state: finished 
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | transexitcode: 0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | exeerrorcode: 0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,479 | INFO     | exeerrordiag: 
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | exitcode: 0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | exitmsg: OK
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | cpuconsumptiontime: 21795 s
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | nevents: 400
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | neventsw: 0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | pid: 3222199
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | pgrp: 3222199
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | corecount: 3
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | event service: False
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | sizes: {0: 2283120, 10: 2283120, 7521: 2310801, 7522: 2319805, 7525: 2320055}
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | --------------------------------------------------
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | 
[2026-02-08 01:53:35] 2026-02-08 00:52:56,480 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | job 7000832694 has completed (purged errors)
[2026-02-08 01:53:35] 2026-02-08 00:52:56,494 | INFO     | overall cleanup function is called
[2026-02-08 01:53:35] 2026-02-08 00:52:57,498 | INFO     | --- collectZombieJob: --- 10, [3222199]
[2026-02-08 01:53:35] 2026-02-08 00:52:57,498 | INFO     | zombie collector waiting for pid 3222199
[2026-02-08 01:53:35] 2026-02-08 00:52:57,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 01:53:35] 2026-02-08 00:52:57,498 | INFO     | collected zombie processes
[2026-02-08 01:53:35] 2026-02-08 00:52:57,499 | INFO     | will attempt to kill all subprocesses of pid=3222199
[2026-02-08 01:53:35] 2026-02-08 00:52:57,542 | INFO     | process IDs to be killed: [3222199] (in reverse order)
[2026-02-08 01:53:35] 2026-02-08 00:52:57,570 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 01:53:35] 2026-02-08 00:52:57,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 01:53:35] 2026-02-08 00:52:57,571 | INFO     | did not find any defunct processes belonging to 3222199
[2026-02-08 01:53:35] 2026-02-08 00:52:57,572 | INFO     | did not find any defunct processes belonging to 3222199
[2026-02-08 01:53:35] 2026-02-08 00:52:57,572 | INFO     | ready for new job
[2026-02-08 01:53:35] 2026-02-08 00:52:57,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 01:53:35] 2026-02-08 00:52:57,573 | INFO     | **************************************
[2026-02-08 01:53:35] 2026-02-08 00:52:57,573 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 01:53:35] 2026-02-08 00:52:57,573 | INFO     | **************************************
[2026-02-08 01:53:35] 2026-02-08 00:52:57,573 | INFO     | 
[2026-02-08 01:53:35] 2026-02-08 00:52:57,573 | INFO     | architecture information:
[2026-02-08 01:53:35] 2026-02-08 00:52:57,573 | INFO     | executing command: cat /etc/os-release
[2026-02-08 01:53:35] 2026-02-08 00:52:57,584 | INFO     | cat /etc/os-release:
[2026-02-08 01:53:35] NAME="CentOS Linux"
[2026-02-08 01:53:35] VERSION="7 (Core)"
[2026-02-08 01:53:35] ID="centos"
[2026-02-08 01:53:35] ID_LIKE="rhel fedora"
[2026-02-08 01:53:35] VERSION_ID="7"
[2026-02-08 01:53:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 01:53:35] ANSI_COLOR="0;31"
[2026-02-08 01:53:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 01:53:35] HOME_URL="https://www.centos.org/"
[2026-02-08 01:53:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 01:53:35] 
[2026-02-08 01:53:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 01:53:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 01:53:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 01:53:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 01:53:35] 
[2026-02-08 01:53:35] 2026-02-08 00:52:57,584 | INFO     | **************************************
[2026-02-08 01:53:35] 2026-02-08 00:52:58,088 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | INFO     | sufficient remaining disk space (331974967296 B)
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | INFO     | update_server=False
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:53:35] 2026-02-08 00:52:58,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 01:53:35] 2026-02-08 00:52:58,105 | INFO     | all payload control threads have been joined
[2026-02-08 01:53:35] 2026-02-08 00:52:58,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 01:53:35] 2026-02-08 00:52:58,168 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 01:53:35] 2026-02-08 00:52:58,169 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 01:53:35] 2026-02-08 00:52:58,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:53:35] 2026-02-08 00:52:58,169 | INFO     | will abort loop
[2026-02-08 01:53:35] 2026-02-08 00:52:58,408 | INFO     | all job control threads have been joined
[2026-02-08 01:53:35] 2026-02-08 00:52:58,975 | INFO     | all data control threads have been joined
[2026-02-08 01:53:35] 2026-02-08 00:52:59,107 | INFO     | [job] queue monitor thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,108 | INFO     | [job] retrieve thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,110 | INFO     | [payload] control thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,175 | INFO     | [job] job monitor thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,279 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,414 | INFO     | [job] control thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,675 | INFO     | [job] validate thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,707 | INFO     | [payload] validate_post thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,735 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,789 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,835 | INFO     | [data] copytool_in thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:52:59,981 | INFO     | [data] control thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:53:00,168 | INFO     | [data] copytool_out thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:53:00,270 | INFO     | [payload] failed_post thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:53:02,108 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:53:09,010 | INFO     | job.realtimelogging is not enabled
[2026-02-08 01:53:35] 2026-02-08 00:53:10,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 01:53:35] 2026-02-08 00:53:29,120 | INFO     | PID=3217770 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 01:53:35] 2026-02-08 00:53:29,120 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 01:53:35] 2026-02-08 00:53:29,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 01:53:35] 2026-02-08 00:53:29,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 01:53:35] 2026-02-08 00:53:29,863 | INFO     | [monitor] cgroup control has ended
[2026-02-08 01:53:35] 2026-02-08 00:53:30,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578967283520)>', '<ExcThread(monitor, started 140578457097984)>']
[2026-02-08 01:53:35] 2026-02-08 00:53:31,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 01:53:35] 2026-02-08 00:53:31,131 | INFO     | [monitor] control thread has ended
[2026-02-08 01:53:35] 2026-02-08 00:53:35,823 | INFO     | all workflow threads have been joined
[2026-02-08 01:53:35] 2026-02-08 00:53:35,823 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 01:53:35] 2026-02-08 00:53:35,823 | INFO     | traces error code: 0
[2026-02-08 01:53:35] 2026-02-08 00:53:35,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 01:53:35] 2026-02-08 00:53:35,873 [wrapper] ==== pilot stdout END ====
[2026-02-08 01:53:35] 2026-02-08 00:53:35,875 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 01:53:35] 2026-02-08 00:53:35,878 [wrapper] pilotpid: 3217770
[2026-02-08 01:53:35] 2026-02-08 00:53:35,881 [wrapper] Pilot exit status: 0
[2026-02-08 01:53:35] 2026-02-08 00:53:35,889 [wrapper] pandaids: 7000832694
[2026-02-08 01:53:35] 2026-02-08 00:53:35,907 [wrapper] cleanup supervisor_pilot 3228063 3217771
[2026-02-08 01:53:35] 2026-02-08 00:53:35,909 [wrapper] Test setup, not cleaning
[2026-02-08 01:53:35] 2026-02-08 00:53:35,912 [wrapper] apfmon messages muted
[2026-02-08 01:53:35] 2026-02-08 00:53:35,915 [wrapper] ==== wrapper stdout END ====
[2026-02-08 01:53:35] 2026-02-08 00:53:35,918 [wrapper] ==== wrapper stderr END ====
[2026-02-08 01:53:35]  *** Error codes and diagnostics ***
[2026-02-08 01:53:35]     "exeErrorCode": 0,
[2026-02-08 01:53:35]     "exeErrorDiag": "",
[2026-02-08 01:53:35]     "pilotErrorCode": 0,
[2026-02-08 01:53:35]     "pilotErrorDiag": "",
[2026-02-08 01:53:35]  *** Listing of results directory ***
[2026-02-08 01:53:35] total 898024
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc    584627 Feb  7 14:33 pilot3.tar.gz
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc      5111 Feb  7 14:33 queuedata.json
[2026-02-08 01:53:35] -rwx------ 1 boinc boinc     36322 Feb  7 14:34 runpilot2-wrapper.sh
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc       100 Feb  7 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 01:53:35] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 23:47 run_atlas
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc       105 Feb  7 23:47 job.xml
[2026-02-08 01:53:35] -rw-r--r-- 2 boinc boinc 651819864 Feb  7 23:47 EVNT.48431111._000104.pool.root.1
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc      6680 Feb  7 23:47 init_data.xml
[2026-02-08 01:53:35] drwxrwx--x 2 boinc boinc      4096 Feb  7 23:47 shared
[2026-02-08 01:53:35] -rw-r--r-- 2 boinc boinc    597956 Feb  7 23:47 input.tar.gz
[2026-02-08 01:53:35] -rw-r--r-- 2 boinc boinc     15845 Feb  7 23:47 start_atlas.sh
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc         0 Feb  7 23:47 boinc_lockfile
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc      2544 Feb  7 23:47 pandaJob.out
[2026-02-08 01:53:35] -rw------- 1 boinc boinc   1009502 Feb  7 23:47 agis_schedconf.cvmfs.json
[2026-02-08 01:53:35] -rw------- 1 boinc boinc   1513088 Feb  7 23:47 agis_ddmendpoints.agis.ALL.json
[2026-02-08 01:53:35] -rw------- 1 boinc boinc       429 Feb  7 23:47 workernode_map.json
[2026-02-08 01:53:35] drwx------ 5 boinc boinc      4096 Feb  7 23:47 pilot3
[2026-02-08 01:53:35] -rw------- 1 boinc boinc 261041928 Feb  8 01:52 HITS.48431113._005253.pool.root.1
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc       530 Feb  8 01:52 boinc_task_state.xml
[2026-02-08 01:53:35] -rw------- 1 boinc boinc      1042 Feb  8 01:52 memory_monitor_summary.json
[2026-02-08 01:53:35] -rw------- 1 boinc boinc    304123 Feb  8 01:52 log.48431113._005253.job.log.tgz.1
[2026-02-08 01:53:35] -rw------- 1 boinc boinc        95 Feb  8 01:52 pilot_heartbeat.json
[2026-02-08 01:53:35] -rw------- 1 boinc boinc      6314 Feb  8 01:52 heartbeat.json
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc        27 Feb  8 01:53 wrapper_checkpoint.txt
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc      8192 Feb  8 01:53 boinc_mmap_file
[2026-02-08 01:53:35] -rw------- 1 boinc boinc      5006 Feb  8 01:53 pilotlog.txt
[2026-02-08 01:53:35] -rw------- 1 boinc boinc   1085396 Feb  8 01:53 log.48431113._005253.job.log.1
[2026-02-08 01:53:35] -rw------- 1 boinc boinc       357 Feb  8 01:53 output.list
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc       620 Feb  8 01:53 runtime_log
[2026-02-08 01:53:35] -rw------- 1 boinc boinc   1402880 Feb  8 01:53 result.tar.gz
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc      8911 Feb  8 01:53 runtime_log.err
[2026-02-08 01:53:35] -rw------- 1 boinc boinc       660 Feb  8 01:53 19HKDmxcx88n9Rq4apOajLDm4fhM0noT9bVooX4SDmv1aKDmdxoOmm.diag
[2026-02-08 01:53:35] -rw-r--r-- 1 boinc boinc     21005 Feb  8 01:53 stderr.txt
[2026-02-08 01:53:35] HITS file was successfully produced:
[2026-02-08 01:53:35] -rw------- 1 boinc boinc 261041928 Feb  8 01:52 shared/HITS.pool.root.1
[2026-02-08 01:53:35]  *** Contents of shared directory: ***
[2026-02-08 01:53:35] total 893448
[2026-02-08 01:53:35] -rw-r--r-- 2 boinc boinc 651819864 Feb  7 23:47 ATLAS.root_0
[2026-02-08 01:53:35] -rw-r--r-- 2 boinc boinc    597956 Feb  7 23:47 input.tar.gz
[2026-02-08 01:53:35] -rw-r--r-- 2 boinc boinc     15845 Feb  7 23:47 start_atlas.sh
[2026-02-08 01:53:35] -rw------- 1 boinc boinc 261041928 Feb  8 01:52 HITS.pool.root.1
[2026-02-08 01:53:35] -rw------- 1 boinc boinc   1402880 Feb  8 01:53 result.tar.gz
01:53:37 (3213715): run_atlas exited; CPU time 21842.001898
01:53:37 (3213715): called boinc_finish(0)

</stderr_txt>
]]>

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