Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:23 (1363829): wrapper (7.7.26015): starting
15:40:23 (1363829): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 15:40:24] Arguments: --nthreads 12
[2026-02-07 15:40:24] Threads: 12
[2026-02-07 15:40:24] Checking for CVMFS
[2026-02-07 15:40:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 15:40:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 15:40:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 15:40:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 15:40:26] 2.11.5.0 444197 98982 230196 156000 1 264 31058215 45568001 30981 130560 0 852397539 99.800 511380508 18754 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-07 15:40:26] CVMFS is ok
[2026-02-07 15:40:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 15:40:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 15:40:26] Further information can be found at the LHC@home message board.
[2026-02-07 15:40:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 15:40:26] Checking for apptainer binary...
[2026-02-07 15:40:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 15:40:26] Running /usr/bin/apptainer --version
[2026-02-07 15:40:26] apptainer version 1.4.1-1.el9
[2026-02-07 15:40:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 15:40:27] wns0087.triumf.lcg
[2026-02-07 15:40:27] apptainer works
[2026-02-07 15:40:27] Set ATHENA_PROC_NUMBER=12
[2026-02-07 15:40:27] Set ATHENA_CORE_NUMBER=12
[2026-02-07 15:40:28] Starting ATLAS job with PandaID=7000836146
[2026-02-07 15:40:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 15:46:07]  *** The last 200 lines of the pilot log: ***
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | WARNING  | wrong length of table data, x=[1770507772.0], y=[1412.0] (must be same and length>=4)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | ..............................
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . Timing measurements:
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . get job = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . initial setup = 33 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . payload setup = 19 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . stage-in = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . payload execution = 70 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . stage-out = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . log creation = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | ..............................
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000836146/pilotlog.txt
[2026-02-07 15:46:07] 2026-02-07 23:45:35,060 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 15:46:07] - Log from pilotlog.txt -
[2026-02-07 15:46:07] 2026-02-07 23:45:35,045 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000836146/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | INFO     | extracted standard info from prmon json
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | WARNING  | wrong length of table data, x=[1770507772.0], y=[1412.0] (must be same and length>=4)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | ..............................
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . Timing measurements:
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . get job = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . initial setup = 33 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . payload setup = 19 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . stage-in = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . payload execution = 70 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . stage-out = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . log creation = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | ..............................
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000836146/pilotlog.txt
[2026-02-07 15:46:07] 2026-02-07 23:45:35,060 | WARNING  | 
[2026-02-07 15:46:07] [begin log extracts]
[2026-02-07 15:46:07] - Log from pilotlog.txt -
[2026-02-07 15:46:07] 2026-02-07 23:45:35,045 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000836146/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | INFO     | extracted standard info from prmon json
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 15:46:07] 2026-02-07 23:45:35,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | WARNING  | wrong length of table data, x=[1770507772.0], y=[1412.0] (must be same and length>=4)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | could have reported an average CPU frequency of 2765 MHz (4 samples)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | ..............................
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . Timing measurements:
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . get job = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . initial setup = 33 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . payload setup = 19 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . stage-in = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . payload execution = 70 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . stage-out = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,047 | INFO     | . log creation = 0 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | ..............................
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 15:46:07] 2026-02-07 23:45:35,048 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000836146/pilotlog.txt
[2026-02-07 15:46:07] [end log extracts]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,061 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,061 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 15:46:07] 2026-02-07 23:45:35,117 | INFO     | 
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | job summary report
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | --------------------------------------------------
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | PanDA job id: 7000836146
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | task id: 48431113
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 15:43:23,470 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | pilot state: failed 
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | transexitcode: 65
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | exeerrorcode: 65
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | exitcode: 65
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | cpuconsumptiontime: 14 s
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | nevents: 0
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | neventsw: 0
[2026-02-07 15:46:07] 2026-02-07 23:45:35,118 | INFO     | pid: 1372531
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | pgrp: 1372531
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | corecount: 12
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | event service: False
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | sizes: {0: 2282682, 1: 2283143, 12: 2283143, 93: 2306425, 94: 2306401, 96: 2310721, 98: 2310877, 215: 2311043}
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | --------------------------------------------------
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | 
[2026-02-07 15:46:07] 2026-02-07 23:45:35,119 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 15:46:07] 2026-02-07 23:45:35,134 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,134 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,135 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 15:46:07] 2026-02-07 23:45:35,136 | INFO     | job 7000836146 has completed (purged errors)
[2026-02-07 15:46:07] 2026-02-07 23:45:35,136 | INFO     | overall cleanup function is called
[2026-02-07 15:46:07] 2026-02-07 23:45:36,142 | INFO     | --- collectZombieJob: --- 10, [1372531]
[2026-02-07 15:46:07] 2026-02-07 23:45:36,142 | INFO     | zombie collector waiting for pid 1372531
[2026-02-07 15:46:07] 2026-02-07 23:45:36,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 15:46:07] 2026-02-07 23:45:36,142 | INFO     | collected zombie processes
[2026-02-07 15:46:07] 2026-02-07 23:45:36,142 | INFO     | will attempt to kill all subprocesses of pid=1372531
[2026-02-07 15:46:07] 2026-02-07 23:45:36,355 | INFO     | process IDs to be killed: [1372531] (in reverse order)
[2026-02-07 15:46:07] 2026-02-07 23:45:36,435 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 15:46:07] 2026-02-07 23:45:36,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 15:46:07] 2026-02-07 23:45:36,444 | INFO     | did not find any defunct processes belonging to 1372531
[2026-02-07 15:46:07] 2026-02-07 23:45:36,453 | INFO     | did not find any defunct processes belonging to 1372531
[2026-02-07 15:46:07] 2026-02-07 23:45:36,453 | INFO     | ready for new job
[2026-02-07 15:46:07] 2026-02-07 23:45:36,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 15:46:07] 2026-02-07 23:45:36,455 | INFO     | **************************************
[2026-02-07 15:46:07] 2026-02-07 23:45:36,455 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 15:46:07] 2026-02-07 23:45:36,455 | INFO     | **************************************
[2026-02-07 15:46:07] 2026-02-07 23:45:36,455 | INFO     | 
[2026-02-07 15:46:07] 2026-02-07 23:45:36,457 | INFO     | architecture information:
[2026-02-07 15:46:07] 2026-02-07 23:45:36,457 | INFO     | executing command: cat /etc/os-release
[2026-02-07 15:46:07] 2026-02-07 23:45:36,470 | INFO     | cat /etc/os-release:
[2026-02-07 15:46:07] NAME="CentOS Linux"
[2026-02-07 15:46:07] VERSION="7 (Core)"
[2026-02-07 15:46:07] ID="centos"
[2026-02-07 15:46:07] ID_LIKE="rhel fedora"
[2026-02-07 15:46:07] VERSION_ID="7"
[2026-02-07 15:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 15:46:07] ANSI_COLOR="0;31"
[2026-02-07 15:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 15:46:07] HOME_URL="https://www.centos.org/"
[2026-02-07 15:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 15:46:07] 
[2026-02-07 15:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 15:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 15:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 15:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 15:46:07] 
[2026-02-07 15:46:07] 2026-02-07 23:45:36,470 | INFO     | **************************************
[2026-02-07 15:46:07] 2026-02-07 23:45:36,972 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 15:46:07] 2026-02-07 23:45:36,985 | INFO     | sufficient remaining disk space (2013860462592 B)
[2026-02-07 15:46:07] 2026-02-07 23:45:36,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 15:46:07] 2026-02-07 23:45:36,986 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 15:46:07] 2026-02-07 23:45:36,986 | INFO     | update_server=False
[2026-02-07 15:46:07] 2026-02-07 23:45:36,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 15:46:07] 2026-02-07 23:45:36,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 15:46:07] 2026-02-07 23:45:36,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 15:46:07] 2026-02-07 23:45:36,987 | INFO     | aborting loop
[2026-02-07 15:46:07] 2026-02-07 23:45:36,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 15:46:07] 2026-02-07 23:45:37,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 15:46:07] 2026-02-07 23:45:37,781 | INFO     | all job control threads have been joined
[2026-02-07 15:46:07] 2026-02-07 23:45:37,800 | INFO     | all data control threads have been joined
[2026-02-07 15:46:07] 2026-02-07 23:45:37,990 | INFO     | [job] queue monitor thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:37,991 | INFO     | [job] retrieve thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:37,995 | INFO     | [job] job monitor thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,227 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,434 | INFO     | all payload control threads have been joined
[2026-02-07 15:46:07] 2026-02-07 23:45:38,657 | INFO     | [data] copytool_in thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,660 | INFO     | [payload] failed_post thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,660 | INFO     | [job] validate thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,787 | INFO     | [job] control thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,805 | INFO     | [data] control thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:38,992 | INFO     | [data] copytool_out thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:39,150 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:39,243 | INFO     | [payload] validate_post thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:39,255 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:39,440 | INFO     | [payload] control thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:39,490 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:41,183 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 15:46:07] 2026-02-07 23:45:47,266 | INFO     | [monitor] cgroup control has ended
[2026-02-07 15:46:07] 2026-02-07 23:45:48,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852650198848)>', '<ExcThread(monitor, started 139851978499840)>']
[2026-02-07 15:46:07] 2026-02-07 23:45:53,779 | INFO     | all workflow threads have been joined
[2026-02-07 15:46:07] 2026-02-07 23:45:53,779 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 15:46:07] 2026-02-07 23:45:53,779 | INFO     | traces error code: 0
[2026-02-07 15:46:07] 2026-02-07 23:45:53,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 15:46:07] 2026-02-07 23:46:06,858 | INFO     | PID=1367753 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | INFO     | .. there are 42 such processes running
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | CRITICAL | thread 'MainThread' is not alive
[2026-02-07 15:46:07] 2026-02-07 23:46:06,859 | INFO     | [monitor] control thread has ended
[2026-02-07 15:46:07] 2026-02-07 23:46:06,970 [wrapper] ==== pilot stdout END ====
[2026-02-07 15:46:07] 2026-02-07 23:46:06,972 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 15:46:07] 2026-02-07 23:46:06,974 [wrapper] pilotpid: 1367753
[2026-02-07 15:46:07] 2026-02-07 23:46:06,976 [wrapper] Pilot exit status: 0
[2026-02-07 15:46:07] 2026-02-07 23:46:06,984 [wrapper] pandaids: 7000836146
[2026-02-07 15:46:07] 2026-02-07 23:46:07,036 [wrapper] cleanup supervisor_pilot 1367759 1367754
[2026-02-07 15:46:07] 2026-02-07 23:46:07,038 [wrapper] Test setup, not cleaning
[2026-02-07 15:46:07] 2026-02-07 23:46:07,040 [wrapper] apfmon messages muted
[2026-02-07 15:46:07] 2026-02-07 23:46:07,042 [wrapper] ==== wrapper stdout END ====
[2026-02-07 15:46:07] 2026-02-07 23:46:07,043 [wrapper] ==== wrapper stderr END ====
[2026-02-07 15:46:07]  *** Error codes and diagnostics ***
[2026-02-07 15:46:07]     "exeErrorCode": 65,
[2026-02-07 15:46:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 15:46:07]     "pilotErrorCode": 1305,
[2026-02-07 15:46:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 15:46:07]  *** Listing of results directory ***
[2026-02-07 15:46:07] total 639940
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc    584627 Feb  7 10:32 pilot3.tar.gz
[2026-02-07 15:46:07] -rwx------. 1 boinc boinc     36322 Feb  7 10:35 runpilot2-wrapper.sh
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc      5111 Feb  7 10:37 queuedata.json
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc       100 Feb  7 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 15:46:07] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 15:40 run_atlas
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc       105 Feb  7 15:40 job.xml
[2026-02-07 15:46:07] -rw-r--r--. 2 boinc boinc 651150850 Feb  7 15:40 EVNT.48431111._000114.pool.root.1
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc      6594 Feb  7 15:40 init_data.xml
[2026-02-07 15:46:07] -rw-r--r--. 2 boinc boinc     15845 Feb  7 15:40 start_atlas.sh
[2026-02-07 15:46:07] drwxrwx--x. 2 boinc boinc      4096 Feb  7 15:40 shared
[2026-02-07 15:46:07] -rw-r--r--. 2 boinc boinc    597958 Feb  7 15:40 input.tar.gz
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc         0 Feb  7 15:40 boinc_lockfile
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc      2545 Feb  7 15:40 pandaJob.out
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc   1009502 Feb  7 15:41 agis_schedconf.cvmfs.json
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc   1513088 Feb  7 15:41 agis_ddmendpoints.agis.ALL.json
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc       445 Feb  7 15:41 workernode_map.json
[2026-02-07 15:46:07] drwx------. 5 boinc boinc      4096 Feb  7 15:41 pilot3
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc       524 Feb  7 15:43 boinc_task_state.xml
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc       961 Feb  7 15:43 memory_monitor_summary.json
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc     21963 Feb  7 15:43 log.48431113._005753.job.log.tgz.1
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc        95 Feb  7 15:45 pilot_heartbeat.json
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc      7016 Feb  7 15:45 heartbeat.json
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc      8192 Feb  7 15:46 boinc_mmap_file
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc        22 Feb  7 15:46 wrapper_checkpoint.txt
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc       893 Feb  7 15:46 pilotlog.txt
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc     87580 Feb  7 15:46 log.48431113._005753.job.log.1
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc       188 Feb  7 15:46 output.list
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc       620 Feb  7 15:46 runtime_log
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc    122880 Feb  7 15:46 result.tar.gz
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc      8635 Feb  7 15:46 runtime_log.err
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc       644 Feb  7 15:46 27aNDmjK288n9Rq4apOajLDm4fhM0noT9bVooX4SDm6WbKDmai6kIo.diag
[2026-02-07 15:46:07] -rw-r--r--. 1 boinc boinc     21785 Feb  7 15:46 stderr.txt
[2026-02-07 15:46:07] No HITS result produced
[2026-02-07 15:46:07]  *** Contents of shared directory: ***
[2026-02-07 15:46:07] total 636616
[2026-02-07 15:46:07] -rw-r--r--. 2 boinc boinc 651150850 Feb  7 15:40 ATLAS.root_0
[2026-02-07 15:46:07] -rw-r--r--. 2 boinc boinc     15845 Feb  7 15:40 start_atlas.sh
[2026-02-07 15:46:07] -rw-r--r--. 2 boinc boinc    597958 Feb  7 15:40 input.tar.gz
[2026-02-07 15:46:07] -rw-------. 1 boinc boinc    122880 Feb  7 15:46 result.tar.gz
15:46:08 (1363829): run_atlas exited; CPU time 24.446216
15:46:08 (1363829): called boinc_finish(0)

</stderr_txt>
]]>

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