Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:32:27 (3826187): wrapper (7.7.26015): starting
14:32:27 (3826187): wrapper: running run_atlas (--nthreads 10)
[2026-02-07 14:32:27] Arguments: --nthreads 10
[2026-02-07 14:32:27] Threads: 10
[2026-02-07 14:32:27] Checking for CVMFS
[2026-02-07 14:32:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 14:32:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 14:32:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 14:32:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 14:32:29] 2.13.3.0 9582 135572 232360 155994 0 402 36499464 40960000 30727 16776704 0 1558259716 99.736 1108215680 48877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 14:32:29] CVMFS is ok
[2026-02-07 14:32:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 14:32:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 14:32:29] Further information can be found at the LHC@home message board.
[2026-02-07 14:32:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 14:32:29] Checking for apptainer binary...
[2026-02-07 14:32:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 14:32:29] Running /usr/bin/apptainer --version
[2026-02-07 14:32:30] apptainer version 1.4.5-2.el9
[2026-02-07 14:32:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 14:32:50] c8-7-4.aglt2.org
[2026-02-07 14:32:50] apptainer works
[2026-02-07 14:32:50] Set ATHENA_PROC_NUMBER=10
[2026-02-07 14:32:50] Set ATHENA_CORE_NUMBER=10
[2026-02-07 14:32:50] Starting ATLAS job with PandaID=7000832368
[2026-02-07 14:32:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 15:47:25]  *** The last 200 lines of the pilot log: ***
[2026-02-07 15:47:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 15:47:25]  is_altstaged=None
[2026-02-07 15:47:25]  is_tar=False
[2026-02-07 15:47:25]  lfn=log.48318042._011070.job.log.tgz.1
[2026-02-07 15:47:25]  mtime=0
[2026-02-07 15:47:25]  protocol_id=None
[2026-02-07 15:47:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 15:47:25]  replicas=None
[2026-02-07 15:47:25]  scope=mc23_13p6TeV
[2026-02-07 15:47:25]  status=None
[2026-02-07 15:47:25]  status_code=0
[2026-02-07 15:47:25]  storage_token=
[2026-02-07 15:47:25]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-7000832368/log.48318042._011070.job.log.tgz.1
[2026-02-07 15:47:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/95/log.48318042._011070.job.log.tgz.1
[2026-02-07 15:47:25]  workdir=None
[2026-02-07 15:47:25] ]
[2026-02-07 15:47:25] 2026-02-07 20:46:23,819 | INFO     | transferring file log.48318042._011070.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-7000832368/log.48318042._011070.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 15:47:25] 2026-02-07 20:46:23,819 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-7000832368/log.48318042._011070.job.log.tgz.1 /tmp/boinchome/slots/5/log.48318042._011070.job
[2026-02-07 15:47:25] 2026-02-07 20:46:23,881 | INFO     | adding to output.list: log.48318042._011070.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/95/log.48318042._011070.job.log.tg
[2026-02-07 15:47:25] 2026-02-07 20:46:23,881 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 15:47:25] 2026-02-07 20:46:23,881 | INFO     | summary of transferred files:
[2026-02-07 15:47:25] 2026-02-07 20:46:23,881 | INFO     |  -- lfn=log.48318042._011070.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 15:47:25] 2026-02-07 20:46:23,881 | INFO     | stage-out finished correctly
[2026-02-07 15:47:25] 2026-02-07 20:46:24,986 | INFO     | time since job start (4333s) is within the limit (349056.0s)
[2026-02-07 15:47:25] 2026-02-07 20:46:25,971 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 15:47:25] 2026-02-07 20:46:26,080 | INFO     | job 7000832368 has state=finished
[2026-02-07 15:47:25] 2026-02-07 20:46:26,080 | INFO     | preparing for final server update for job 7000832368 in state='finished'
[2026-02-07 15:47:25] 2026-02-07 20:46:26,080 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7000832368/jobReport.json
[2026-02-07 15:47:25] 2026-02-07 20:46:26,082 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-02-07 15:47:25] 2026-02-07 20:46:26,082 | INFO     | this job has now completed (state=finished)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,082 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,082 | INFO     | log transfer has been attempted: DONE
[2026-02-07 15:47:25] 2026-02-07 20:46:26,082 | INFO     | job 7000832368 has finished - writing final server update
[2026-02-07 15:47:25] 2026-02-07 20:46:26,082 | INFO     | total number of processed events: 400 (read)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,117 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7000832368/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,122 | INFO     | extracted standard info from prmon json
[2026-02-07 15:47:25] 2026-02-07 20:46:26,122 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 15:47:25] 2026-02-07 20:46:26,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 15:47:25] 2026-02-07 20:46:26,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 15:47:25] 2026-02-07 20:46:26,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 15:47:25] 2026-02-07 20:46:26,123 | INFO     | fitting pss+swap vs Time
[2026-02-07 15:47:25] 2026-02-07 20:46:26,123 | INFO     | sum of square deviations: 81284647.359375
[2026-02-07 15:47:25] 2026-02-07 20:46:26,123 | INFO     | sum of deviations: -4854329017.921875
[2026-02-07 15:47:25] 2026-02-07 20:46:26,123 | INFO     | mean x: 1770495132.703125
[2026-02-07 15:47:25] 2026-02-07 20:46:26,123 | INFO     | mean y: 2657549.109375
[2026-02-07 15:47:25] 2026-02-07 20:46:26,123 | INFO     | intersect: 105736842022.74065
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | chi2: 0.011895131034040463
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | current memory leak: -59.72 B/s (using 64 data points, chi2=0.01)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | ..............................
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . Timing measurements:
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . get job = 0 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . initial setup = 27 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . payload setup = 32 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . stage-in = 0 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . payload execution = 4295 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . stage-out = 1 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | . log creation = 0 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,124 | INFO     | ..............................
[2026-02-07 15:47:25] 2026-02-07 20:46:26,293 | INFO     | 
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | job summary report
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | --------------------------------------------------
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | PanDA job id: 7000832368
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | task id: 48318042
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | errors: (none)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | pilot state: finished 
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | transexitcode: 0
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | exeerrorcode: 0
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | exeerrordiag: 
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | exitcode: 0
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | exitmsg: OK
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | cpuconsumptiontime: 25423 s
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | nevents: 400
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | neventsw: 0
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | pid: 3860635
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | pgrp: 3860635
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | corecount: 10
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | event service: False
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | sizes: {0: 2282671, 1: 2283132, 4329: 2309155, 4331: 2318153, 4333: 2318403}
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | --------------------------------------------------
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | 
[2026-02-07 15:47:25] 2026-02-07 20:46:26,294 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 15:47:25] 2026-02-07 20:46:26,498 | INFO     | job 7000832368 has completed (purged errors)
[2026-02-07 15:47:25] 2026-02-07 20:46:26,498 | INFO     | overall cleanup function is called
[2026-02-07 15:47:25] 2026-02-07 20:46:26,588 | WARNING  | process 3860635 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 15:47:25] 2026-02-07 20:46:27,068 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 15:47:25] 2026-02-07 20:46:27,505 | INFO     | --- collectZombieJob: --- 10, [3860635]
[2026-02-07 15:47:25] 2026-02-07 20:46:27,506 | INFO     | zombie collector waiting for pid 3860635
[2026-02-07 15:47:25] 2026-02-07 20:46:27,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 15:47:25] 2026-02-07 20:46:27,506 | INFO     | collected zombie processes
[2026-02-07 15:47:25] 2026-02-07 20:46:27,506 | INFO     | will attempt to kill all subprocesses of pid=3860635
[2026-02-07 15:47:25] 2026-02-07 20:46:28,867 | INFO     | number of running child processes to parent process 3860635: 1
[2026-02-07 15:47:25] 2026-02-07 20:46:28,899 | INFO     | maximum number of monitored processes: 6
[2026-02-07 15:47:25] 2026-02-07 20:46:28,900 | INFO     | aborting job monitoring since job object (job id=7000832368) has expired
[2026-02-07 15:47:25] 2026-02-07 20:46:29,285 | INFO     | process IDs to be killed: [3860635] (in reverse order)
[2026-02-07 15:47:25] 2026-02-07 20:46:29,953 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 15:47:25] 2026-02-07 20:46:29,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 15:47:25] 2026-02-07 20:46:29,977 | INFO     | did not find any defunct processes belonging to 3860635
[2026-02-07 15:47:25] 2026-02-07 20:46:29,998 | INFO     | did not find any defunct processes belonging to 3860635
[2026-02-07 15:47:25] 2026-02-07 20:46:29,999 | INFO     | ready for new job
[2026-02-07 15:47:25] 2026-02-07 20:46:29,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 15:47:25] 2026-02-07 20:46:30,000 | INFO     | **************************************
[2026-02-07 15:47:25] 2026-02-07 20:46:30,000 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 15:47:25] 2026-02-07 20:46:30,000 | INFO     | **************************************
[2026-02-07 15:47:25] 2026-02-07 20:46:30,000 | INFO     | 
[2026-02-07 15:47:25] 2026-02-07 20:46:30,004 | INFO     | architecture information:
[2026-02-07 15:47:25] 2026-02-07 20:46:30,004 | INFO     | executing command: cat /etc/os-release
[2026-02-07 15:47:25] 2026-02-07 20:46:30,076 | INFO     | cat /etc/os-release:
[2026-02-07 15:47:25] NAME="CentOS Linux"
[2026-02-07 15:47:25] VERSION="7 (Core)"
[2026-02-07 15:47:25] ID="centos"
[2026-02-07 15:47:25] ID_LIKE="rhel fedora"
[2026-02-07 15:47:25] VERSION_ID="7"
[2026-02-07 15:47:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 15:47:25] ANSI_COLOR="0;31"
[2026-02-07 15:47:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 15:47:25] HOME_URL="https://www.centos.org/"
[2026-02-07 15:47:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 15:47:25] 
[2026-02-07 15:47:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 15:47:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 15:47:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 15:47:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 15:47:25] 
[2026-02-07 15:47:25] 2026-02-07 20:46:30,076 | INFO     | **************************************
[2026-02-07 15:47:25] 2026-02-07 20:46:30,579 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-07 15:47:25] 2026-02-07 20:46:30,651 | INFO     | sufficient remaining disk space (164882284544 B)
[2026-02-07 15:47:25] 2026-02-07 20:46:30,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 15:47:25] 2026-02-07 20:46:30,651 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 15:47:25] 2026-02-07 20:46:30,651 | INFO     | update_server=False
[2026-02-07 15:47:25] 2026-02-07 20:46:30,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 15:47:25] 2026-02-07 20:46:30,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 15:47:25] 2026-02-07 20:46:30,652 | INFO     | aborting loop
[2026-02-07 15:47:25] 2026-02-07 20:46:30,758 | INFO     | all data control threads have been joined
[2026-02-07 15:47:25] 2026-02-07 20:46:31,272 | INFO     | all payload control threads have been joined
[2026-02-07 15:47:25] 2026-02-07 20:46:31,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 15:47:25] 2026-02-07 20:46:31,658 | INFO     | [job] job monitor thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:31,658 | INFO     | [job] retrieve thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:31,742 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:31,743 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:31,772 | INFO     | [data] control thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:31,796 | INFO     | all job control threads have been joined
[2026-02-07 15:47:25] 2026-02-07 20:46:32,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 15:47:25] 2026-02-07 20:46:32,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 15:47:25] 2026-02-07 20:46:32,278 | INFO     | [payload] control thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:32,331 | INFO     | [job] queue monitor thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:32,529 | INFO     | [payload] validate_post thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:32,802 | INFO     | [job] control thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:32,806 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:32,825 | INFO     | [job] validate thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:32,965 | INFO     | [data] copytool_in thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:33,220 | INFO     | [payload] failed_post thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:34,076 | INFO     | [data] copytool_out thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:36,133 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:41,548 | INFO     | job.realtimelogging is not enabled
[2026-02-07 15:47:25] 2026-02-07 20:46:42,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 15:47:25] 2026-02-07 20:46:59,933 | INFO     | PID=3846722 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 15:47:25] 2026-02-07 20:46:59,937 | INFO     | .. there are 40 such processes running
[2026-02-07 15:47:25] 2026-02-07 20:46:59,938 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 15:47:25] 2026-02-07 20:46:59,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 15:47:25] 2026-02-07 20:46:59,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 15:47:25] 2026-02-07 20:47:18,583 | INFO     | [monitor] cgroup control has ended
[2026-02-07 15:47:25] 2026-02-07 20:47:18,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807577880384)>', '<ExcThread(monitor, started 139807304206080)>']
[2026-02-07 15:47:25] 2026-02-07 20:47:19,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 15:47:25] 2026-02-07 20:47:19,081 | INFO     | [monitor] control thread has ended
[2026-02-07 15:47:25] 2026-02-07 20:47:23,625 | INFO     | all workflow threads have been joined
[2026-02-07 15:47:25] 2026-02-07 20:47:23,626 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 15:47:25] 2026-02-07 20:47:23,626 | INFO     | traces error code: 0
[2026-02-07 15:47:25] 2026-02-07 20:47:23,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 15:47:25] 2026-02-07 20:47:24,218 [wrapper] ==== pilot stdout END ====
[2026-02-07 15:47:25] 2026-02-07 20:47:24,226 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 15:47:25] 2026-02-07 20:47:24,241 [wrapper] pilotpid: 3846722
[2026-02-07 15:47:25] 2026-02-07 20:47:24,272 [wrapper] Pilot exit status: 0
[2026-02-07 15:47:25] 2026-02-07 20:47:24,388 [wrapper] pandaids: 7000832368
[2026-02-07 15:47:25] 2026-02-07 20:47:24,795 [wrapper] cleanup supervisor_pilot  104041 3846723
[2026-02-07 15:47:25] 2026-02-07 20:47:24,816 [wrapper] Test setup, not cleaning
[2026-02-07 15:47:25] 2026-02-07 20:47:24,855 [wrapper] apfmon messages muted
[2026-02-07 15:47:25] 2026-02-07 20:47:24,893 [wrapper] ==== wrapper stdout END ====
[2026-02-07 15:47:25] 2026-02-07 20:47:24,944 [wrapper] ==== wrapper stderr END ====
[2026-02-07 15:47:25]  *** Error codes and diagnostics ***
[2026-02-07 15:47:25]     "exeErrorCode": 0,
[2026-02-07 15:47:25]     "exeErrorDiag": "",
[2026-02-07 15:47:25]     "pilotErrorCode": 0,
[2026-02-07 15:47:25]     "pilotErrorDiag": "",
[2026-02-07 15:47:25]  *** Listing of results directory ***
[2026-02-07 15:47:25] total 670556
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas    584627 Feb  7 08:33 pilot3.tar.gz
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas      5111 Feb  7 08:33 queuedata.json
[2026-02-07 15:47:25] -rwx------. 1 boincer umatlas     36322 Feb  7 08:33 runpilot2-wrapper.sh
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas       100 Feb  7 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 15:47:25] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 14:32 run_atlas
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas       105 Feb  7 14:32 job.xml
[2026-02-07 15:47:25] -rw-r--r--. 2 boincer umatlas 494186117 Feb  7 14:32 EVNT.48318040._000212.pool.root.1
[2026-02-07 15:47:25] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 14:32 start_atlas.sh
[2026-02-07 15:47:25] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 14:32 shared
[2026-02-07 15:47:25] -rw-r--r--. 2 boincer umatlas    597947 Feb  7 14:32 input.tar.gz
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas         0 Feb  7 14:32 boinc_lockfile
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas      2537 Feb  7 14:32 pandaJob.out
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas        57 Feb  7 14:32 setup.sh.local
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas   1009502 Feb  7 14:33 agis_schedconf.cvmfs.json
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas   1513088 Feb  7 14:33 agis_ddmendpoints.agis.ALL.json
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas       430 Feb  7 14:34 workernode_map.json
[2026-02-07 15:47:25] drwx------. 5 boincer umatlas      4096 Feb  7 14:34 pilot3
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas      7172 Feb  7 15:39 init_data.xml
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas 186637220 Feb  7 15:44 HITS.48318042._011070.pool.root.1
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas       531 Feb  7 15:44 boinc_task_state.xml
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas        95 Feb  7 15:46 pilot_heartbeat.json
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas      1060 Feb  7 15:46 memory_monitor_summary.json
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas    342053 Feb  7 15:46 log.48318042._011070.job.log.tgz.1
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas      6356 Feb  7 15:46 heartbeat.json
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas      4893 Feb  7 15:47 pilotlog.txt
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas    603107 Feb  7 15:47 log.48318042._011070.job.log.1
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas        27 Feb  7 15:47 wrapper_checkpoint.txt
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 15:47 boinc_mmap_file
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas       357 Feb  7 15:47 output.list
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas       620 Feb  7 15:47 runtime_log
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas    962560 Feb  7 15:47 result.tar.gz
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas      9333 Feb  7 15:47 runtime_log.err
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas       655 Feb  7 15:47 G9cKDmjcx88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwLbKDmplLPIn.diag
[2026-02-07 15:47:25] -rw-r--r--. 1 boincer umatlas     15138 Feb  7 15:47 stderr.txt
[2026-02-07 15:47:25] HITS file was successfully produced:
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas 186637220 Feb  7 15:44 shared/HITS.pool.root.1
[2026-02-07 15:47:25]  *** Contents of shared directory: ***
[2026-02-07 15:47:25] total 666416
[2026-02-07 15:47:25] -rw-r--r--. 2 boincer umatlas 494186117 Feb  7 14:32 ATLAS.root_0
[2026-02-07 15:47:25] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 14:32 start_atlas.sh
[2026-02-07 15:47:25] -rw-r--r--. 2 boincer umatlas    597947 Feb  7 14:32 input.tar.gz
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas 186637220 Feb  7 15:44 HITS.pool.root.1
[2026-02-07 15:47:25] -rw-------. 1 boincer umatlas    962560 Feb  7 15:47 result.tar.gz
15:47:27 (3826187): run_atlas exited; CPU time 25558.081350
15:47:27 (3826187): called boinc_finish(0)

</stderr_txt>
]]>

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