Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:41 (1238618): wrapper (7.7.26015): starting
12:29:41 (1238618): wrapper: running run_atlas (--nthreads 9)
[2026-02-07 12:29:41] Arguments: --nthreads 9
[2026-02-07 12:29:41] Threads: 9
[2026-02-07 12:29:41] Checking for CVMFS
[2026-02-07 12:29:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 12:29:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 12:29:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 12:29:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 12:29:43] 2.13.3.0 11772 135426 208724 155991 2 529 18194281 32935937 25525 16776704 0 679772477 99.550 820237562 37536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 12:29:43] CVMFS is ok
[2026-02-07 12:29:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 12:29:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 12:29:43] Further information can be found at the LHC@home message board.
[2026-02-07 12:29:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 12:29:43] Checking for apptainer binary...
[2026-02-07 12:29:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 12:29:43] Running /usr/bin/apptainer --version
[2026-02-07 12:29:43] apptainer version 1.4.5-2.el9
[2026-02-07 12:29:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 12:29:43] c7-3-28.aglt2.org
[2026-02-07 12:29:43] apptainer works
[2026-02-07 12:29:43] Set ATHENA_PROC_NUMBER=9
[2026-02-07 12:29:43] Set ATHENA_CORE_NUMBER=9
[2026-02-07 12:29:44] Starting ATLAS job with PandaID=7000739867
[2026-02-07 12:29:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 16:42:26]  *** The last 200 lines of the pilot log: ***
[2026-02-07 16:42:26] 2026-02-07 21:40:54,349 | INFO     | total number of processed events: 400 (read)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,363 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7000739867/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,363 | INFO     | extracted standard info from prmon json
[2026-02-07 16:42:26] 2026-02-07 21:40:54,364 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 16:42:26] 2026-02-07 21:40:54,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 16:42:26] 2026-02-07 21:40:54,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 16:42:26] 2026-02-07 21:40:54,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 16:42:26] 2026-02-07 21:40:54,367 | INFO     | fitting pss+swap vs Time
[2026-02-07 16:42:26] 2026-02-07 21:40:54,368 | INFO     | sum of square deviations: 4616240351.008147
[2026-02-07 16:42:26] 2026-02-07 21:40:54,369 | INFO     | sum of deviations: 3082832947.0650406
[2026-02-07 16:42:26] 2026-02-07 21:40:54,370 | INFO     | mean x: 1770492950.7886178
[2026-02-07 16:42:26] 2026-02-07 21:40:54,370 | INFO     | mean y: 2599480.3089430896
[2026-02-07 16:42:26] 2026-02-07 21:40:54,370 | INFO     | intersect: -1179776996.2637174
[2026-02-07 16:42:26] 2026-02-07 21:40:54,370 | INFO     | chi2: 2.6964493534166873
[2026-02-07 16:42:26] 2026-02-07 21:40:54,371 | INFO     | sum of square deviations: 4340455781.668027
[2026-02-07 16:42:26] 2026-02-07 21:40:54,372 | INFO     | sum of deviations: 20106438493.93364
[2026-02-07 16:42:26] 2026-02-07 21:40:54,372 | INFO     | mean x: 1770492798.2904565
[2026-02-07 16:42:26] 2026-02-07 21:40:54,372 | INFO     | mean y: 2608738.058091286
[2026-02-07 16:42:26] 2026-02-07 21:40:54,372 | INFO     | intersect: -8198904269.660922
[2026-02-07 16:42:26] 2026-02-07 21:40:54,373 | INFO     | chi2: 1.9204894795185963
[2026-02-07 16:42:26] 2026-02-07 21:40:54,373 | INFO     | current chi2=1.9204894795185963 (change=28.777098035046254 %)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,373 | INFO     | sum of square deviations: 4075836376.542379
[2026-02-07 16:42:26] 2026-02-07 21:40:54,374 | INFO     | sum of deviations: 19731035683.389854
[2026-02-07 16:42:26] 2026-02-07 21:40:54,374 | INFO     | mean x: 1770492645.779661
[2026-02-07 16:42:26] 2026-02-07 21:40:54,374 | INFO     | mean y: 2608521.622881356
[2026-02-07 16:42:26] 2026-02-07 21:40:54,375 | INFO     | intersect: -8568308056.901007
[2026-02-07 16:42:26] 2026-02-07 21:40:54,375 | INFO     | chi2: 1.9214584314020013
[2026-02-07 16:42:26] 2026-02-07 21:40:54,375 | INFO     | current chi2=1.9214584314020013 (change=-0.05045338148105614 %)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,375 | INFO     | right removable region: 235
[2026-02-07 16:42:26] 2026-02-07 21:40:54,375 | INFO     | sum of square deviations: 4340427478.0829735
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | sum of deviations: -43944095484.161804
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | mean x: 1770493103.2946057
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | mean y: 2625291.875518672
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | intersect: 17927753260.973866
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | chi2: 0.9480193739188864
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | current chi2=0.9480193739188864 (change=64.84193657419728 %)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,377 | INFO     | sum of square deviations: 4075824117.6398344
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | sum of deviations: -49368949081.13985
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | mean x: 1770493255.8008475
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | mean y: 2628383.6991525423
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | intersect: 21447957934.560165
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | chi2: 0.8995146795851207
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | current chi2=0.8995146795851207 (change=5.11642437572334 %)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,379 | INFO     | left removable region: 20
[2026-02-07 16:42:26] 2026-02-07 21:40:54,380 | INFO     | sum of square deviations: 3081717603.693015
[2026-02-07 16:42:26] 2026-02-07 21:40:54,381 | INFO     | sum of deviations: -23852471199.186043
[2026-02-07 16:42:26] 2026-02-07 21:40:54,381 | INFO     | mean x: 1770493225.283721
[2026-02-07 16:42:26] 2026-02-07 21:40:54,381 | INFO     | mean y: 2634215.2325581396
[2026-02-07 16:42:26] 2026-02-07 21:40:54,381 | INFO     | intersect: 13706238534.4039
[2026-02-07 16:42:26] 2026-02-07 21:40:54,381 | INFO     | chi2: 0.09359873347154857
[2026-02-07 16:42:26] 2026-02-07 21:40:54,381 | INFO     | current memory leak: -7.74 B/s (using 215 data points, chi2=0.09)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | could have reported an average CPU frequency of 3118 MHz (12 samples)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | ..............................
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . Timing measurements:
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . get job = 0 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . initial setup = 15 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . payload setup = 21 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . stage-in = 0 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . payload execution = 14985 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . stage-out = 2 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | . log creation = 0 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,382 | INFO     | ..............................
[2026-02-07 16:42:26] 2026-02-07 21:40:54,688 | INFO     | 
[2026-02-07 16:42:26] 2026-02-07 21:40:54,688 | INFO     | job summary report
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | --------------------------------------------------
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | PanDA job id: 7000739867
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | task id: 48431113
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | errors: (none)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | pilot state: finished 
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | transexitcode: 0
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | exeerrorcode: 0
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | exeerrordiag: 
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | exitcode: 0
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | exitmsg: OK
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | cpuconsumptiontime: 45656 s
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | nevents: 400
[2026-02-07 16:42:26] 2026-02-07 21:40:54,689 | INFO     | neventsw: 0
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | pid: 1258115
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | pgrp: 1258115
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | corecount: 9
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | event service: False
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | sizes: {0: 2282021, 1: 2283139, 2: 2283139, 12: 2283167, 15010: 2314123, 15013: 2323121, 15014: 2323305, 15016: 2323499}
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | --------------------------------------------------
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | 
[2026-02-07 16:42:26] 2026-02-07 21:40:54,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-07 16:42:26] 2026-02-07 21:40:54,799 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,799 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,799 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,799 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,800 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,801 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,801 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 16:42:26] 2026-02-07 21:40:54,801 | INFO     | job 7000739867 has completed (purged errors)
[2026-02-07 16:42:26] 2026-02-07 21:40:54,801 | INFO     | overall cleanup function is called
[2026-02-07 16:42:26] 2026-02-07 21:40:55,529 | INFO     | PID=1246719 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-07 16:42:26] 2026-02-07 21:40:55,529 | INFO     | .. there are 39 such processes running
[2026-02-07 16:42:26] 2026-02-07 21:40:55,823 | INFO     | --- collectZombieJob: --- 10, [1258115]
[2026-02-07 16:42:26] 2026-02-07 21:40:55,823 | INFO     | zombie collector waiting for pid 1258115
[2026-02-07 16:42:26] 2026-02-07 21:40:55,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 16:42:26] 2026-02-07 21:40:55,823 | INFO     | collected zombie processes
[2026-02-07 16:42:26] 2026-02-07 21:40:55,823 | INFO     | will attempt to kill all subprocesses of pid=1258115
[2026-02-07 16:42:26] 2026-02-07 21:40:56,558 | INFO     | process IDs to be killed: [1258115] (in reverse order)
[2026-02-07 16:42:26] 2026-02-07 21:40:56,768 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 16:42:26] 2026-02-07 21:40:56,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 16:42:26] 2026-02-07 21:40:56,791 | INFO     | did not find any defunct processes belonging to 1258115
[2026-02-07 16:42:26] 2026-02-07 21:40:56,813 | INFO     | did not find any defunct processes belonging to 1258115
[2026-02-07 16:42:26] 2026-02-07 21:40:56,813 | INFO     | ready for new job
[2026-02-07 16:42:26] 2026-02-07 21:40:56,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 16:42:26] 2026-02-07 21:40:56,815 | INFO     | **************************************
[2026-02-07 16:42:26] 2026-02-07 21:40:56,815 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 16:42:26] 2026-02-07 21:40:56,815 | INFO     | **************************************
[2026-02-07 16:42:26] 2026-02-07 21:40:56,815 | INFO     | 
[2026-02-07 16:42:26] 2026-02-07 21:40:56,820 | INFO     | architecture information:
[2026-02-07 16:42:26] 2026-02-07 21:40:56,820 | INFO     | executing command: cat /etc/os-release
[2026-02-07 16:42:26] 2026-02-07 21:40:56,841 | INFO     | cat /etc/os-release:
[2026-02-07 16:42:26] NAME="CentOS Linux"
[2026-02-07 16:42:26] VERSION="7 (Core)"
[2026-02-07 16:42:26] ID="centos"
[2026-02-07 16:42:26] ID_LIKE="rhel fedora"
[2026-02-07 16:42:26] VERSION_ID="7"
[2026-02-07 16:42:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 16:42:26] ANSI_COLOR="0;31"
[2026-02-07 16:42:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 16:42:26] HOME_URL="https://www.centos.org/"
[2026-02-07 16:42:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 16:42:26] 
[2026-02-07 16:42:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 16:42:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 16:42:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 16:42:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 16:42:26] 
[2026-02-07 16:42:26] 2026-02-07 21:40:56,841 | INFO     | **************************************
[2026-02-07 16:42:26] 2026-02-07 21:40:57,349 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-07 16:42:26] 2026-02-07 21:40:57,367 | INFO     | sufficient remaining disk space (70412926976 B)
[2026-02-07 16:42:26] 2026-02-07 21:40:57,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 16:42:26] 2026-02-07 21:40:57,367 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 16:42:26] 2026-02-07 21:40:57,368 | INFO     | update_server=False
[2026-02-07 16:42:26] 2026-02-07 21:40:57,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 16:42:26] 2026-02-07 21:40:57,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 16:42:26] 2026-02-07 21:40:57,368 | INFO     | aborting loop
[2026-02-07 16:42:26] 2026-02-07 21:40:57,746 | INFO     | all data control threads have been joined
[2026-02-07 16:42:26] 2026-02-07 21:40:58,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 16:42:26] 2026-02-07 21:40:58,377 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:58,381 | INFO     | [job] job monitor thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:58,381 | INFO     | [job] retrieve thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:58,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 16:42:26] 2026-02-07 21:40:58,756 | INFO     | [data] control thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:58,772 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:58,814 | INFO     | [payload] validate_post thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:58,823 | INFO     | all payload control threads have been joined
[2026-02-07 16:42:26] 2026-02-07 21:40:59,000 | INFO     | [job] validate thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:59,038 | INFO     | all job control threads have been joined
[2026-02-07 16:42:26] 2026-02-07 21:40:59,118 | INFO     | [payload] failed_post thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:59,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 16:42:26] 2026-02-07 21:40:59,579 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:59,707 | INFO     | [data] copytool_in thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:40:59,829 | INFO     | [payload] control thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:41:00,044 | INFO     | [job] control thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:41:00,506 | INFO     | [job] queue monitor thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:41:00,646 | INFO     | [data] copytool_out thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:41:02,076 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:41:08,148 | INFO     | job.realtimelogging is not enabled
[2026-02-07 16:42:26] 2026-02-07 21:41:09,154 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 16:42:26] 2026-02-07 21:41:28,398 | INFO     | PID=1246719 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 16:42:26] 2026-02-07 21:41:28,398 | INFO     | .. there are 39 such processes running
[2026-02-07 16:42:26] 2026-02-07 21:41:28,399 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 16:42:26] 2026-02-07 21:41:28,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 16:42:26] 2026-02-07 21:41:28,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 16:42:26] 2026-02-07 21:41:52,041 | INFO     | [monitor] cgroup control has ended
[2026-02-07 16:42:26] 2026-02-07 21:41:53,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662655338304)>', '<ExcThread(monitor, started 140661705660160)>']
[2026-02-07 16:42:26] 2026-02-07 21:41:53,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 16:42:26] 2026-02-07 21:41:53,565 | INFO     | [monitor] control thread has ended
[2026-02-07 16:42:26] 2026-02-07 21:41:58,197 | INFO     | all workflow threads have been joined
[2026-02-07 16:42:26] 2026-02-07 21:41:58,197 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 16:42:26] 2026-02-07 21:41:58,197 | INFO     | traces error code: 0
[2026-02-07 16:42:26] 2026-02-07 21:41:58,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 16:42:26] 2026-02-07 21:41:58,322 [wrapper] ==== pilot stdout END ====
[2026-02-07 16:42:26] 2026-02-07 21:41:58,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 16:42:26] 2026-02-07 21:41:58,326 [wrapper] pilotpid: 1246719
[2026-02-07 16:42:26] 2026-02-07 21:41:58,328 [wrapper] Pilot exit status: 0
[2026-02-07 16:42:26] 2026-02-07 21:41:58,340 [wrapper] pandaids: 7000739867
[2026-02-07 16:42:26] 2026-02-07 21:41:58,479 [wrapper] cleanup supervisor_pilot 2491239 1246720
[2026-02-07 16:42:26] 2026-02-07 21:41:58,482 [wrapper] Test setup, not cleaning
[2026-02-07 16:42:26] 2026-02-07 21:41:58,484 [wrapper] apfmon messages muted
[2026-02-07 16:42:26] 2026-02-07 21:41:58,486 [wrapper] ==== wrapper stdout END ====
[2026-02-07 16:42:26] 2026-02-07 21:41:58,488 [wrapper] ==== wrapper stderr END ====
[2026-02-07 16:42:26]  *** Error codes and diagnostics ***
[2026-02-07 16:42:26]     "exeErrorCode": 0,
[2026-02-07 16:42:26]     "exeErrorDiag": "",
[2026-02-07 16:42:26]     "pilotErrorCode": 0,
[2026-02-07 16:42:26]     "pilotErrorDiag": "",
[2026-02-07 16:42:26]  *** Listing of results directory ***
[2026-02-07 16:42:26] total 900456
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas    584627 Feb  7 06:17 pilot3.tar.gz
[2026-02-07 16:42:26] -rwx------. 1 boincer umatlas     36322 Feb  7 06:18 runpilot2-wrapper.sh
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas      5111 Feb  7 06:20 queuedata.json
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas       100 Feb  7 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 16:42:26] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 12:29 run_atlas
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas       105 Feb  7 12:29 job.xml
[2026-02-07 16:42:26] -rw-r--r--. 2 boincer umatlas 653502557 Feb  7 12:29 EVNT.48431111._000093.pool.root.1
[2026-02-07 16:42:26] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 12:29 start_atlas.sh
[2026-02-07 16:42:26] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 12:29 shared
[2026-02-07 16:42:26] -rw-r--r--. 2 boincer umatlas    597952 Feb  7 12:29 input.tar.gz
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas         0 Feb  7 12:29 boinc_lockfile
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas      2541 Feb  7 12:29 pandaJob.out
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas        57 Feb  7 12:29 setup.sh.local
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas   1009494 Feb  7 12:30 agis_schedconf.cvmfs.json
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas       428 Feb  7 12:30 workernode_map.json
[2026-02-07 16:42:26] drwx------. 5 boincer umatlas      4096 Feb  7 12:30 pilot3
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas      6946 Feb  7 16:36 init_data.xml
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas 259882260 Feb  7 16:39 HITS.48431113._004679.pool.root.1
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas       531 Feb  7 16:39 boinc_task_state.xml
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas      1044 Feb  7 16:40 memory_monitor_summary.json
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas   1513088 Feb  7 16:40 agis_ddmendpoints.agis.ALL.json
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas    462266 Feb  7 16:40 log.48431113._004679.job.log.tgz.1
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas      6345 Feb  7 16:40 heartbeat.json
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas        95 Feb  7 16:41 pilot_heartbeat.json
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas      4892 Feb  7 16:41 pilotlog.txt
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas   1905878 Feb  7 16:41 log.48431113._004679.job.log.1
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas       357 Feb  7 16:41 output.list
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas       620 Feb  7 16:41 runtime_log
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas   2385920 Feb  7 16:41 result.tar.gz
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas      9337 Feb  7 16:41 runtime_log.err
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas       657 Feb  7 16:41 qp7NDmwVv88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrBbKDmTNOaJn.diag
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas        28 Feb  7 16:42 wrapper_checkpoint.txt
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 16:42 boinc_mmap_file
[2026-02-07 16:42:26] -rw-r--r--. 1 boincer umatlas     21232 Feb  7 16:42 stderr.txt
[2026-02-07 16:42:26] HITS file was successfully produced:
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas 259882260 Feb  7 16:39 shared/HITS.pool.root.1
[2026-02-07 16:42:26]  *** Contents of shared directory: ***
[2026-02-07 16:42:26] total 894920
[2026-02-07 16:42:26] -rw-r--r--. 2 boincer umatlas 653502557 Feb  7 12:29 ATLAS.root_0
[2026-02-07 16:42:26] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 12:29 start_atlas.sh
[2026-02-07 16:42:26] -rw-r--r--. 2 boincer umatlas    597952 Feb  7 12:29 input.tar.gz
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas 259882260 Feb  7 16:39 HITS.pool.root.1
[2026-02-07 16:42:26] -rw-------. 1 boincer umatlas   2385920 Feb  7 16:41 result.tar.gz
16:42:28 (1238618): run_atlas exited; CPU time 46333.883187
16:42:28 (1238618): called boinc_finish(0)

</stderr_txt>
]]>

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