Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:47:38 (2149455): wrapper (7.7.26015): starting
00:47:38 (2149455): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 00:47:38] Arguments: --nthreads 12
[2026-02-08 00:47:38] Threads: 12
[2026-02-08 00:47:38] Checking for CVMFS
[2026-02-08 00:47:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 00:47:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 00:47:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 00:47:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 00:47:41] 2.13.3.0 2149665 0 25032 156001 4 1 3291977 4096001 0 130560 0 0 100.000 0 0 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-08 00:47:41] CVMFS is ok
[2026-02-08 00:47:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 00:47:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 00:47:41] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-08 00:47:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-08 00:47:41] Further information can be found at the LHC@home message board.
[2026-02-08 00:47:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 00:47:41] Checking for apptainer binary...
[2026-02-08 00:47:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 00:47:41] Running /usr/bin/apptainer --version
[2026-02-08 00:47:41] apptainer version 1.4.5
[2026-02-08 00:47:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 00:47:42] test-run
[2026-02-08 00:47:42] apptainer works
[2026-02-08 00:47:42] Set ATHENA_PROC_NUMBER=12
[2026-02-08 00:47:42] Set ATHENA_CORE_NUMBER=12
[2026-02-08 00:47:42] Starting ATLAS job with PandaID=6999412183
[2026-02-08 00:47:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 01:18:21]  *** The last 200 lines of the pilot log: ***
[2026-02-08 01:18:21]  is_altstaged=None
[2026-02-08 01:18:21]  is_tar=False
[2026-02-08 01:18:21]  lfn=log.48318034._010536.job.log.tgz.1
[2026-02-08 01:18:21]  mtime=0
[2026-02-08 01:18:21]  protocol_id=None
[2026-02-08 01:18:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 01:18:21]  replicas=None
[2026-02-08 01:18:21]  scope=mc23_13p6TeV
[2026-02-08 01:18:21]  status=None
[2026-02-08 01:18:21]  status_code=0
[2026-02-08 01:18:21]  storage_token=
[2026-02-08 01:18:21]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6999412183/log.48318034._010536.job.log.tgz.1
[2026-02-08 01:18:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/9c/log.48318034._010536.job.log.tgz.1
[2026-02-08 01:18:21]  workdir=None
[2026-02-08 01:18:21] ]
[2026-02-08 01:18:21] 2026-02-08 01:17:40,818 | INFO     | transferring file log.48318034._010536.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6999412183/log.48318034._010536.job.log.tgz.1 to /var/lib/boinc
[2026-02-08 01:18:21] 2026-02-08 01:17:40,819 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6999412183/log.48318034._010536.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.483180
[2026-02-08 01:18:21] 2026-02-08 01:17:40,830 | INFO     | adding to output.list: log.48318034._010536.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/9c/log.48318034._010536.job.log.tg
[2026-02-08 01:18:21] 2026-02-08 01:17:40,831 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 01:18:21] 2026-02-08 01:17:40,831 | INFO     | summary of transferred files:
[2026-02-08 01:18:21] 2026-02-08 01:17:40,831 | INFO     |  -- lfn=log.48318034._010536.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 01:18:21] 2026-02-08 01:17:40,831 | INFO     | stage-out finished correctly
[2026-02-08 01:18:21] 2026-02-08 01:17:42,264 | WARNING  | process 2158448 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 01:18:21] 2026-02-08 01:17:42,264 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6999412183/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 01:18:21] 2026-02-08 01:17:42,293 | INFO     | number of running child processes to parent process 2158448: 1
[2026-02-08 01:18:21] 2026-02-08 01:17:42,293 | INFO     | maximum number of monitored processes: 6
[2026-02-08 01:18:21] 2026-02-08 01:17:42,404 | INFO     | time since job start (1770s) is within the limit (349056.0s)
[2026-02-08 01:18:21] 2026-02-08 01:17:43,556 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 01:18:21] 2026-02-08 01:17:44,410 | INFO     | time since job start (1772s) is within the limit (349056.0s)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,562 | INFO     | job 6999412183 has state=finished
[2026-02-08 01:18:21] 2026-02-08 01:17:44,562 | INFO     | preparing for final server update for job 6999412183 in state='finished'
[2026-02-08 01:18:21] 2026-02-08 01:17:44,562 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-6999412183/jobReport.json
[2026-02-08 01:18:21] 2026-02-08 01:17:44,563 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-02-08 01:18:21] 2026-02-08 01:17:44,564 | INFO     | this job has now completed (state=finished)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,564 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,564 | INFO     | log transfer has been attempted: DONE
[2026-02-08 01:18:21] 2026-02-08 01:17:44,564 | INFO     | job 6999412183 has finished - writing final server update
[2026-02-08 01:18:21] 2026-02-08 01:17:44,564 | INFO     | total number of processed events: 400 (read)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,566 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6999412183/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,566 | INFO     | extracted standard info from prmon json
[2026-02-08 01:18:21] 2026-02-08 01:17:44,566 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 01:18:21] 2026-02-08 01:17:44,566 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 01:18:21] 2026-02-08 01:17:44,566 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 01:18:21] 2026-02-08 01:17:44,566 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | fitting pss+swap vs Time
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | sum of square deviations: 3294945.5
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | sum of deviations: 456512257.5
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | mean x: 1770512666.5
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | mean y: 2870238.227272727
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | intersect: -245300347771.37552
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | chi2: 0.028130585461711825
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | current memory leak: 138.55 B/s (using 22 data points, chi2=0.03)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | could have reported an average CPU frequency of 4291 MHz (4 samples)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | ..............................
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . Timing measurements:
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . get job = 0 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . initial setup = 15 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . payload setup = 15 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . stage-in = 0 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . payload execution = 1738 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . stage-out = 0 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | . log creation = 0 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,567 | INFO     | ..............................
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | 
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | job summary report
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | --------------------------------------------------
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | PanDA job id: 6999412183
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | task id: 48318034
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | errors: (none)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | pilot state: finished 
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | transexitcode: 0
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | exeerrorcode: 0
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | exeerrordiag: 
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | exitcode: 0
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | exitmsg: OK
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | cpuconsumptiontime: 16459 s
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | nevents: 400
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | neventsw: 0
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | pid: 2158448
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | pgrp: 2158448
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | corecount: 12
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | event service: False
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | sizes: {0: 2274163, 1: 2283059, 11: 2283087, 1758: 2316978, 1761: 2316978, 1762: 2317172}
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | --------------------------------------------------
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | 
[2026-02-08 01:18:21] 2026-02-08 01:17:44,671 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 01:18:21] 2026-02-08 01:17:44,690 | INFO     | job 6999412183 has completed (purged errors)
[2026-02-08 01:18:21] 2026-02-08 01:17:44,691 | INFO     | overall cleanup function is called
[2026-02-08 01:18:21] 2026-02-08 01:17:45,697 | INFO     | --- collectZombieJob: --- 10, [2158448]
[2026-02-08 01:18:21] 2026-02-08 01:17:45,697 | INFO     | zombie collector waiting for pid 2158448
[2026-02-08 01:18:21] 2026-02-08 01:17:45,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 01:18:21] 2026-02-08 01:17:45,697 | INFO     | collected zombie processes
[2026-02-08 01:18:21] 2026-02-08 01:17:45,697 | INFO     | will attempt to kill all subprocesses of pid=2158448
[2026-02-08 01:18:21] 2026-02-08 01:17:45,723 | INFO     | process IDs to be killed: [2158448] (in reverse order)
[2026-02-08 01:18:21] 2026-02-08 01:17:45,748 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 01:18:21] 2026-02-08 01:17:45,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 01:18:21] 2026-02-08 01:17:45,750 | INFO     | did not find any defunct processes belonging to 2158448
[2026-02-08 01:18:21] 2026-02-08 01:17:45,751 | INFO     | did not find any defunct processes belonging to 2158448
[2026-02-08 01:18:21] 2026-02-08 01:17:45,751 | INFO     | ready for new job
[2026-02-08 01:18:21] 2026-02-08 01:17:45,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 01:18:21] 2026-02-08 01:17:45,752 | INFO     | **************************************
[2026-02-08 01:18:21] 2026-02-08 01:17:45,752 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 01:18:21] 2026-02-08 01:17:45,752 | INFO     | **************************************
[2026-02-08 01:18:21] 2026-02-08 01:17:45,752 | INFO     | 
[2026-02-08 01:18:21] 2026-02-08 01:17:45,753 | INFO     | pilot is running in a VM
[2026-02-08 01:18:21] 2026-02-08 01:17:45,753 | INFO     | architecture information:
[2026-02-08 01:18:21] 2026-02-08 01:17:45,753 | INFO     | executing command: cat /etc/os-release
[2026-02-08 01:18:21] 2026-02-08 01:17:45,759 | INFO     | cat /etc/os-release:
[2026-02-08 01:18:21] NAME="CentOS Linux"
[2026-02-08 01:18:21] VERSION="7 (Core)"
[2026-02-08 01:18:21] ID="centos"
[2026-02-08 01:18:21] ID_LIKE="rhel fedora"
[2026-02-08 01:18:21] VERSION_ID="7"
[2026-02-08 01:18:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 01:18:21] ANSI_COLOR="0;31"
[2026-02-08 01:18:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 01:18:21] HOME_URL="https://www.centos.org/"
[2026-02-08 01:18:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 01:18:21] 
[2026-02-08 01:18:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 01:18:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 01:18:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 01:18:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 01:18:21] 
[2026-02-08 01:18:21] 2026-02-08 01:17:45,759 | INFO     | **************************************
[2026-02-08 01:18:21] 2026-02-08 01:17:46,262 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-02-08 01:18:21] 2026-02-08 01:17:46,271 | INFO     | sufficient remaining disk space (60538486784 B)
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | INFO     | update_server=False
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | INFO     | aborting loop
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 01:18:21] 2026-02-08 01:17:46,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:18:21] 2026-02-08 01:17:46,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 01:18:21] 2026-02-08 01:17:46,791 | INFO     | all data control threads have been joined
[2026-02-08 01:18:21] 2026-02-08 01:17:47,277 | INFO     | [job] retrieve thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,277 | INFO     | [job] queue monitor thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,277 | INFO     | [job] job monitor thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,384 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,479 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,483 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,593 | INFO     | all payload control threads have been joined
[2026-02-08 01:18:21] 2026-02-08 01:17:47,634 | INFO     | all job control threads have been joined
[2026-02-08 01:18:21] 2026-02-08 01:17:47,663 | INFO     | [data] copytool_in thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,795 | INFO     | [data] control thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:47,914 | INFO     | [payload] validate_post thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:48,379 | INFO     | [data] copytool_out thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:48,559 | INFO     | [payload] failed_post thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:48,598 | INFO     | [payload] control thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:48,639 | INFO     | [job] control thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:48,735 | INFO     | [job] validate thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:49,608 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 01:18:21] 2026-02-08 01:17:53,614 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:17:55,515 [wrapper] supervise_pilot (15 min periods counter: 3)
[2026-02-08 01:18:21] 2026-02-08 01:17:56,974 | INFO     | job.realtimelogging is not enabled
[2026-02-08 01:18:21] 2026-02-08 01:17:57,979 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 01:18:21] 2026-02-08 01:18:14,176 | INFO     | [monitor] cgroup control has ended
[2026-02-08 01:18:21] 2026-02-08 01:18:16,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137066968966976)>', '<ExcThread(monitor, started 137065886902016)>']
[2026-02-08 01:18:21] 2026-02-08 01:18:16,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 01:18:21] 2026-02-08 01:18:16,427 | INFO     | [monitor] control thread has ended
[2026-02-08 01:18:21] 2026-02-08 01:18:21,231 | INFO     | all workflow threads have been joined
[2026-02-08 01:18:21] 2026-02-08 01:18:21,231 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 01:18:21] 2026-02-08 01:18:21,231 | INFO     | traces error code: 0
[2026-02-08 01:18:21] 2026-02-08 01:18:21,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 01:18:21] 2026-02-08 01:18:21,294 [wrapper] ==== pilot stdout END ====
[2026-02-08 01:18:21] 2026-02-08 01:18:21,295 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 01:18:21] 2026-02-08 01:18:21,297 [wrapper] pilotpid: 2153880
[2026-02-08 01:18:21] 2026-02-08 01:18:21,298 [wrapper] Pilot exit status: 0
[2026-02-08 01:18:21] 2026-02-08 01:18:21,304 [wrapper] pandaids: 6999412183
[2026-02-08 01:18:21] 2026-02-08 01:18:21,329 [wrapper] cleanup supervisor_pilot 2176227 2153881
[2026-02-08 01:18:21] 2026-02-08 01:18:21,330 [wrapper] Test setup, not cleaning
[2026-02-08 01:18:21] 2026-02-08 01:18:21,332 [wrapper] apfmon messages muted
[2026-02-08 01:18:21] 2026-02-08 01:18:21,333 [wrapper] ==== wrapper stdout END ====
[2026-02-08 01:18:21] 2026-02-08 01:18:21,334 [wrapper] ==== wrapper stderr END ====
[2026-02-08 01:18:21]  *** Error codes and diagnostics ***
[2026-02-08 01:18:21]     "exeErrorCode": 0,
[2026-02-08 01:18:21]     "exeErrorDiag": "",
[2026-02-08 01:18:21]     "pilotErrorCode": 0,
[2026-02-08 01:18:21]     "pilotErrorDiag": "",
[2026-02-08 01:18:21]  *** Listing of results directory ***
[2026-02-08 01:18:21] total 672732
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc    584627 Feb  7 05:41 pilot3.tar.gz
[2026-02-08 01:18:21] -rwx------ 1 boinc boinc     36322 Feb  7 05:43 runpilot2-wrapper.sh
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc      5111 Feb  7 05:45 queuedata.json
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc       100 Feb  8 00:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 01:18:21] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 00:47 run_atlas
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc       105 Feb  8 00:47 job.xml
[2026-02-08 01:18:21] -rw-r--r-- 2 boinc boinc     15845 Feb  8 00:47 start_atlas.sh
[2026-02-08 01:18:21] drwxrwx--x 2 boinc boinc      4096 Feb  8 00:47 shared
[2026-02-08 01:18:21] -rw-r--r-- 2 boinc boinc    597958 Feb  8 00:47 input.tar.gz
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc      7992 Feb  8 00:47 init_data.xml
[2026-02-08 01:18:21] -rw-r--r-- 2 boinc boinc 497088045 Feb  8 00:47 EVNT.48318032._000200.pool.root.1
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc         0 Feb  8 00:47 boinc_lockfile
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc      2536 Feb  8 00:47 pandaJob.out
[2026-02-08 01:18:21] -rw------- 1 boinc boinc   1009502 Feb  8 00:47 agis_schedconf.cvmfs.json
[2026-02-08 01:18:21] -rw------- 1 boinc boinc   1513088 Feb  8 00:47 agis_ddmendpoints.agis.ALL.json
[2026-02-08 01:18:21] -rw------- 1 boinc boinc       420 Feb  8 00:48 workernode_map.json
[2026-02-08 01:18:21] drwx------ 5 boinc boinc      4096 Feb  8 00:48 pilot3
[2026-02-08 01:18:21] -rw------- 1 boinc boinc        95 Feb  8 01:17 pilot_heartbeat.json
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc       530 Feb  8 01:17 boinc_task_state.xml
[2026-02-08 01:18:21] -rw------- 1 boinc boinc 186487662 Feb  8 01:17 HITS.48318034._010536.pool.root.1
[2026-02-08 01:18:21] -rw------- 1 boinc boinc      1020 Feb  8 01:17 memory_monitor_summary.json
[2026-02-08 01:18:21] -rw------- 1 boinc boinc    379539 Feb  8 01:17 log.48318034._010536.job.log.tgz.1
[2026-02-08 01:18:21] -rw------- 1 boinc boinc      6280 Feb  8 01:17 heartbeat.json
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc        27 Feb  8 01:18 wrapper_checkpoint.txt
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc      8192 Feb  8 01:18 boinc_mmap_file
[2026-02-08 01:18:21] -rw------- 1 boinc boinc      4689 Feb  8 01:18 pilotlog.txt
[2026-02-08 01:18:21] -rw------- 1 boinc boinc    299405 Feb  8 01:18 log.48318034._010536.job.log.1
[2026-02-08 01:18:21] -rw------- 1 boinc boinc       357 Feb  8 01:18 output.list
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc       620 Feb  8 01:18 runtime_log
[2026-02-08 01:18:21] -rw------- 1 boinc boinc    696320 Feb  8 01:18 result.tar.gz
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc      8889 Feb  8 01:18 runtime_log.err
[2026-02-08 01:18:21] -rw------- 1 boinc boinc       642 Feb  8 01:18 l6DLDmjHq88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJoaKDmDqVNIn.diag
[2026-02-08 01:18:21] -rw-r--r-- 1 boinc boinc     21567 Feb  8 01:18 stderr.txt
[2026-02-08 01:18:21] HITS file was successfully produced:
[2026-02-08 01:18:21] -rw------- 1 boinc boinc 186487662 Feb  8 01:17 shared/HITS.pool.root.1
[2026-02-08 01:18:21]  *** Contents of shared directory: ***
[2026-02-08 01:18:21] total 668848
[2026-02-08 01:18:21] -rw-r--r-- 2 boinc boinc     15845 Feb  8 00:47 start_atlas.sh
[2026-02-08 01:18:21] -rw-r--r-- 2 boinc boinc    597958 Feb  8 00:47 input.tar.gz
[2026-02-08 01:18:21] -rw-r--r-- 2 boinc boinc 497088045 Feb  8 00:47 ATLAS.root_0
[2026-02-08 01:18:21] -rw------- 1 boinc boinc 186487662 Feb  8 01:17 HITS.pool.root.1
[2026-02-08 01:18:21] -rw------- 1 boinc boinc    696320 Feb  8 01:18 result.tar.gz
01:18:22 (2149455): run_atlas exited; CPU time 16464.235082
01:18:22 (2149455): called boinc_finish(0)

</stderr_txt>
]]>

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