Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:30:23 (3547633): wrapper (7.7.26015): starting
09:30:23 (3547633): wrapper: running run_atlas (--nthreads 6)
[2026-02-09 09:30:23] Arguments: --nthreads 6
[2026-02-09 09:30:23] Threads: 6
[2026-02-09 09:30:23] Checking for CVMFS
[2026-02-09 09:30:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 09:30:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 09:30:24] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 09:30:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 09:30:25] 2.13.3.0 329939 2413 63032 156049 0 49 4091521 4096001 0 130560 0 842660 98.279 1995514 588 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-09 09:30:25] CVMFS is ok
[2026-02-09 09:30:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 09:30:25] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-09 09:30:25] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-09 09:30:25] Further information can be found at the LHC@home message board.
[2026-02-09 09:30:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 09:30:25] Checking for apptainer binary...
[2026-02-09 09:30:25] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2026-02-09 09:30:25] apptainer is not installed, using version from CVMFS
[2026-02-09 09:30:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 09:30:25] cachyos
[2026-02-09 09:30:25] apptainer works
[2026-02-09 09:30:25] Set ATHENA_PROC_NUMBER=6
[2026-02-09 09:30:25] Set ATHENA_CORE_NUMBER=6
[2026-02-09 09:30:25] Starting ATLAS job with PandaID=7000738048
[2026-02-09 09:30:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 12:07:01]  *** The last 200 lines of the pilot log: ***
[2026-02-09 12:07:01] 2026-02-09 11:06:28,403 | INFO     | this job has now completed (state=finished)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,403 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,403 | INFO     | log transfer has been attempted: DONE
[2026-02-09 12:07:01] 2026-02-09 11:06:28,403 | INFO     | job 7000738048 has finished - writing final server update
[2026-02-09 12:07:01] 2026-02-09 11:06:28,403 | INFO     | total number of processed events: 400 (read)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,406 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7000738048/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,407 | INFO     | extracted standard info from prmon json
[2026-02-09 12:07:01] 2026-02-09 11:06:28,407 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 12:07:01] 2026-02-09 11:06:28,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 12:07:01] 2026-02-09 11:06:28,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 12:07:01] 2026-02-09 11:06:28,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 12:07:01] 2026-02-09 11:06:28,410 | INFO     | fitting pss+swap vs Time
[2026-02-09 12:07:01] 2026-02-09 11:06:28,410 | INFO     | sum of square deviations: 1110539892.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,411 | INFO     | sum of deviations: -32243898744.000004
[2026-02-09 12:07:01] 2026-02-09 11:06:28,411 | INFO     | mean x: 1770630497.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,411 | INFO     | mean y: 2598026.4509803923
[2026-02-09 12:07:01] 2026-02-09 11:06:28,411 | INFO     | intersect: 51411854793.884964
[2026-02-09 12:07:01] 2026-02-09 11:06:28,411 | INFO     | chi2: 1.5885955469942956
[2026-02-09 12:07:01] 2026-02-09 11:06:28,412 | INFO     | sum of square deviations: 1005179777.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | sum of deviations: -30460590614.499992
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | mean x: 1770630344.5
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | mean y: 2600608.560810811
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | intersect: 53659117867.98592
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | chi2: 1.582086814977223
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | current chi2=1.582086814977223 (change=0.4097161187054533 %)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | right removable region: 147
[2026-02-09 12:07:01] 2026-02-09 11:06:28,413 | INFO     | sum of square deviations: 1005179777.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,414 | INFO     | sum of deviations: -51141467432.00001
[2026-02-09 12:07:01] 2026-02-09 11:06:28,414 | INFO     | mean x: 1770630649.5
[2026-02-09 12:07:01] 2026-02-09 11:06:28,414 | INFO     | mean y: 2624839.108108108
[2026-02-09 12:07:01] 2026-02-09 11:06:28,415 | INFO     | intersect: 90088649018.54727
[2026-02-09 12:07:01] 2026-02-09 11:06:28,415 | INFO     | chi2: 0.28499011028298465
[2026-02-09 12:07:01] 2026-02-09 11:06:28,415 | INFO     | current chi2=0.28499011028298465 (change=82.06024744169777 %)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,415 | INFO     | sum of square deviations: 906703512.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,416 | INFO     | sum of deviations: -45791764747.99999
[2026-02-09 12:07:01] 2026-02-09 11:06:28,416 | INFO     | mean x: 1770630802.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,416 | INFO     | mean y: 2616535.6993006994
[2026-02-09 12:07:01] 2026-02-09 11:06:28,416 | INFO     | intersect: 89425794087.86317
[2026-02-09 12:07:01] 2026-02-09 11:06:28,416 | INFO     | chi2: 0.28425409035390364
[2026-02-09 12:07:01] 2026-02-09 11:06:28,416 | INFO     | current chi2=0.28425409035390364 (change=0.25826156856817606 %)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,417 | INFO     | left removable region: 20
[2026-02-09 12:07:01] 2026-02-09 11:06:28,417 | INFO     | sum of square deviations: 635130048.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,417 | INFO     | sum of deviations: -31211436717.000015
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | mean x: 1770630924.0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | mean y: 2597868.149606299
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | intersect: 87014596761.31056
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | chi2: 0.25902123903008895
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | current memory leak: -49.14 B/s (using 127 data points, chi2=0.26)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | could have reported an average CPU frequency of 1720 MHz (9 samples)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,418 | INFO     | ..............................
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . Timing measurements:
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . get job = 0 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . initial setup = 5 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . payload setup = 4 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . stage-in = 0 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . payload execution = 9326 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . stage-out = 0 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | . log creation = 0 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,419 | INFO     | ..............................
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | 
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | job summary report
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | --------------------------------------------------
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | PanDA job id: 7000738048
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | task id: 48431113
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | errors: (none)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 12:07:01] 2026-02-09 11:06:28,508 | INFO     | pilot state: finished 
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | transexitcode: 0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | exeerrorcode: 0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | exeerrordiag: 
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | exitcode: 0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | exitmsg: OK
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | cpuconsumptiontime: 53163 s
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | nevents: 400
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | neventsw: 0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | pid: 3556788
[2026-02-09 12:07:01] 2026-02-09 11:06:28,509 | INFO     | pgrp: 3556788
[2026-02-09 12:07:01] 2026-02-09 11:06:28,510 | INFO     | corecount: 6
[2026-02-09 12:07:01] 2026-02-09 11:06:28,510 | INFO     | event service: False
[2026-02-09 12:07:01] 2026-02-09 11:06:28,510 | INFO     | sizes: {0: 2282911, 1: 2283117, 11: 2283145, 9334: 2311634, 9335: 2320632, 9336: 2321074}
[2026-02-09 12:07:01] 2026-02-09 11:06:28,510 | INFO     | --------------------------------------------------
[2026-02-09 12:07:01] 2026-02-09 11:06:28,510 | INFO     | 
[2026-02-09 12:07:01] 2026-02-09 11:06:28,510 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,528 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,528 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,528 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 12:07:01] 2026-02-09 11:06:28,528 | INFO     | job 7000738048 has completed (purged errors)
[2026-02-09 12:07:01] 2026-02-09 11:06:28,528 | INFO     | overall cleanup function is called
[2026-02-09 12:07:01] 2026-02-09 11:06:29,327 | INFO     | PID=3551990 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 12:07:01] 2026-02-09 11:06:29,579 | INFO     | --- collectZombieJob: --- 10, [3556788]
[2026-02-09 12:07:01] 2026-02-09 11:06:29,579 | INFO     | zombie collector waiting for pid 3556788
[2026-02-09 12:07:01] 2026-02-09 11:06:29,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 12:07:01] 2026-02-09 11:06:29,579 | INFO     | collected zombie processes
[2026-02-09 12:07:01] 2026-02-09 11:06:29,579 | INFO     | will attempt to kill all subprocesses of pid=3556788
[2026-02-09 12:07:01] 2026-02-09 11:06:29,697 | INFO     | process IDs to be killed: [3556788] (in reverse order)
[2026-02-09 12:07:01] 2026-02-09 11:06:29,744 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 12:07:01] 2026-02-09 11:06:29,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 12:07:01] 2026-02-09 11:06:29,748 | INFO     | did not find any defunct processes belonging to 3556788
[2026-02-09 12:07:01] 2026-02-09 11:06:29,751 | INFO     | did not find any defunct processes belonging to 3556788
[2026-02-09 12:07:01] 2026-02-09 11:06:29,751 | INFO     | ready for new job
[2026-02-09 12:07:01] 2026-02-09 11:06:29,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 12:07:01] 2026-02-09 11:06:29,753 | INFO     | **************************************
[2026-02-09 12:07:01] 2026-02-09 11:06:29,754 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 12:07:01] 2026-02-09 11:06:29,754 | INFO     | **************************************
[2026-02-09 12:07:01] 2026-02-09 11:06:29,754 | INFO     | 
[2026-02-09 12:07:01] 2026-02-09 11:06:29,755 | INFO     | architecture information:
[2026-02-09 12:07:01] 2026-02-09 11:06:29,755 | INFO     | executing command: cat /etc/os-release
[2026-02-09 12:07:01] 2026-02-09 11:06:29,824 | INFO     | cat /etc/os-release:
[2026-02-09 12:07:01] NAME="CentOS Linux"
[2026-02-09 12:07:01] VERSION="7 (Core)"
[2026-02-09 12:07:01] ID="centos"
[2026-02-09 12:07:01] ID_LIKE="rhel fedora"
[2026-02-09 12:07:01] VERSION_ID="7"
[2026-02-09 12:07:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 12:07:01] ANSI_COLOR="0;31"
[2026-02-09 12:07:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 12:07:01] HOME_URL="https://www.centos.org/"
[2026-02-09 12:07:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 12:07:01] 
[2026-02-09 12:07:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 12:07:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 12:07:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 12:07:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 12:07:01] 
[2026-02-09 12:07:01] 2026-02-09 11:06:29,824 | INFO     | **************************************
[2026-02-09 12:07:01] 2026-02-09 11:06:30,326 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-09 12:07:01] 2026-02-09 11:06:30,338 | INFO     | sufficient remaining disk space (9178185728 B)
[2026-02-09 12:07:01] 2026-02-09 11:06:30,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 12:07:01] 2026-02-09 11:06:30,338 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 12:07:01] 2026-02-09 11:06:30,338 | INFO     | update_server=False
[2026-02-09 12:07:01] 2026-02-09 11:06:30,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 12:07:01] 2026-02-09 11:06:30,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 12:07:01] 2026-02-09 11:06:30,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 12:07:01] 2026-02-09 11:06:30,864 | INFO     | all data control threads have been joined
[2026-02-09 12:07:01] 2026-02-09 11:06:31,069 | INFO     | all job control threads have been joined
[2026-02-09 12:07:01] 2026-02-09 11:06:31,344 | INFO     | [job] retrieve thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:31,344 | INFO     | [job] queue monitor thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:31,601 | INFO     | [payload] failed_post thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:31,679 | INFO     | all payload control threads have been joined
[2026-02-09 12:07:01] 2026-02-09 11:06:31,691 | INFO     | job.realtimelogging is not enabled
[2026-02-09 12:07:01] 2026-02-09 11:06:31,781 | INFO     | [job] validate thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:31,869 | INFO     | [data] control thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,074 | INFO     | [job] control thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,128 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,208 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,261 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,335 | WARNING  | process 3556788 can no longer be monitored (due to stat problems) - aborting
[2026-02-09 12:07:01] 2026-02-09 11:06:32,421 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 12:07:01] 2026-02-09 11:06:32,501 | INFO     | [payload] validate_post thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,525 | INFO     | number of running child processes to parent process 3556788: 1
[2026-02-09 12:07:01] 2026-02-09 11:06:32,525 | INFO     | maximum number of monitored processes: 6
[2026-02-09 12:07:01] 2026-02-09 11:06:32,525 | INFO     | aborting job monitoring since job object (job id=7000738048) has expired
[2026-02-09 12:07:01] 2026-02-09 11:06:32,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 12:07:01] 2026-02-09 11:06:32,525 | INFO     | will abort loop
[2026-02-09 12:07:01] 2026-02-09 11:06:32,684 | INFO     | [payload] control thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,691 | INFO     | [data] copytool_in thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,692 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:32,743 | INFO     | [data] copytool_out thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:33,531 | INFO     | [job] job monitor thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:33,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 12:07:01] 2026-02-09 11:06:37,844 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 12:07:01] 2026-02-09 11:06:55,460 | INFO     | [monitor] cgroup control has ended
[2026-02-09 12:07:01] 2026-02-09 11:06:56,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140245299390272)>', '<ExcThread(monitor, started 140244791826176)>']
[2026-02-09 12:07:01] 2026-02-09 11:07:01,355 | INFO     | all workflow threads have been joined
[2026-02-09 12:07:01] 2026-02-09 11:07:01,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 12:07:01] 2026-02-09 11:07:01,355 | INFO     | traces error code: 0
[2026-02-09 12:07:01] 2026-02-09 11:07:01,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 12:07:01] 2026-02-09 11:07:01,554 | INFO     | PID=3551990 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 12:07:01] 2026-02-09 11:07:01,555 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 12:07:01] 2026-02-09 11:07:01,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 12:07:01] 2026-02-09 11:07:01,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 12:07:01] 2026-02-09 11:07:01,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 12:07:01] 2026-02-09 11:07:01,555 | INFO     | [monitor] control thread has ended
[2026-02-09 12:07:01] 2026-02-09 11:07:01,672 [wrapper] ==== pilot stdout END ====
[2026-02-09 12:07:01] 2026-02-09 11:07:01,674 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 12:07:01] 2026-02-09 11:07:01,677 [wrapper] pilotpid: 3551990
[2026-02-09 12:07:01] 2026-02-09 11:07:01,679 [wrapper] Pilot exit status: 0
[2026-02-09 12:07:01] 2026-02-09 11:07:01,688 [wrapper] pandaids: 7000738048
[2026-02-09 12:07:01] 2026-02-09 11:07:01,726 [wrapper] cleanup supervisor_pilot 3780830 3551991
[2026-02-09 12:07:01] 2026-02-09 11:07:01,728 [wrapper] Test setup, not cleaning
[2026-02-09 12:07:01] 2026-02-09 11:07:01,731 [wrapper] apfmon messages muted
[2026-02-09 12:07:01] 2026-02-09 11:07:01,733 [wrapper] ==== wrapper stdout END ====
[2026-02-09 12:07:01] 2026-02-09 11:07:01,736 [wrapper] ==== wrapper stderr END ====
[2026-02-09 12:07:01]  *** Error codes and diagnostics ***
[2026-02-09 12:07:01]     "exeErrorCode": 0,
[2026-02-09 12:07:01]     "exeErrorDiag": "",
[2026-02-09 12:07:01]     "pilotErrorCode": 0,
[2026-02-09 12:07:01]     "pilotErrorDiag": "",
[2026-02-09 12:07:01]  *** Listing of results directory ***
[2026-02-09 12:07:01] total 888820
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc      5111  7. Feb 12:17 queuedata.json
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc    584627  7. Feb 12:17 pilot3.tar.gz
[2026-02-09 12:07:01] -rwx------ 1 boinc boinc     36322  7. Feb 12:17 runpilot2-wrapper.sh
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc       100  9. Feb 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 12:07:01] -rwxr-xr-x 1 boinc boinc      7986  9. Feb 09:30 run_atlas
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc       105  9. Feb 09:30 job.xml
[2026-02-09 12:07:01] -rw-r--r-- 2 boinc boinc 646247290  9. Feb 09:30 EVNT.48431111._000087.pool.root.1
[2026-02-09 12:07:01] drwxrwx--x 1 boinc boinc        76  9. Feb 09:30 shared
[2026-02-09 12:07:01] -rw-r--r-- 2 boinc boinc    597950  9. Feb 09:30 input.tar.gz
[2026-02-09 12:07:01] -rw-r--r-- 2 boinc boinc     15845  9. Feb 09:30 start_atlas.sh
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc         0  9. Feb 09:30 boinc_setup_complete
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc         0  9. Feb 09:30 boinc_lockfile
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc      2544  9. Feb 09:30 pandaJob.out
[2026-02-09 12:07:01] -rw------- 1 boinc boinc   1009488  9. Feb 09:30 agis_schedconf.cvmfs.json
[2026-02-09 12:07:01] -rw------- 1 boinc boinc   1513144  9. Feb 09:30 agis_ddmendpoints.agis.ALL.json
[2026-02-09 12:07:01] -rw------- 1 boinc boinc       418  9. Feb 09:30 workernode_map.json
[2026-02-09 12:07:01] drwx------ 1 boinc boinc       414  9. Feb 09:30 pilot3
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc      8863  9. Feb 09:48 init_data.xml
[2026-02-09 12:07:01] -rw------- 1 boinc boinc 256618243  9. Feb 12:05 HITS.48431113._004400.pool.root.1
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc       530  9. Feb 12:05 boinc_task_state.xml
[2026-02-09 12:07:01] -rw------- 1 boinc boinc      1033  9. Feb 12:06 memory_monitor_summary.json
[2026-02-09 12:07:01] -rw------- 1 boinc boinc    375474  9. Feb 12:06 log.48431113._004400.job.log.tgz.1
[2026-02-09 12:07:01] -rw------- 1 boinc boinc      6300  9. Feb 12:06 heartbeat.json
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc      8192  9. Feb 12:06 boinc_mmap_file
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc        27  9. Feb 12:06 wrapper_checkpoint.txt
[2026-02-09 12:07:01] -rw------- 1 boinc boinc       747  9. Feb 12:07 pilotlog.txt
[2026-02-09 12:07:01] -rw------- 1 boinc boinc        95  9. Feb 12:07 pilot_heartbeat.json
[2026-02-09 12:07:01] -rw------- 1 boinc boinc   1307702  9. Feb 12:07 log.48431113._004400.job.log.1
[2026-02-09 12:07:01] -rw------- 1 boinc boinc       357  9. Feb 12:07 output.list
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc       620  9. Feb 12:07 runtime_log
[2026-02-09 12:07:01] -rw------- 1 boinc boinc   1699840  9. Feb 12:07 result.tar.gz
[2026-02-09 12:07:01] -rw------- 1 boinc boinc       649  9. Feb 12:07 sC3KDmCVv88n9Rq4apOajLDm4fhM0noT9bVooX4SDmJmaKDmgp2SOo.diag
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc      8773  9. Feb 12:07 runtime_log.err
[2026-02-09 12:07:01] -rw-r--r-- 1 boinc boinc     21510  9. Feb 12:07 stderr.txt
[2026-02-09 12:07:01] HITS file was successfully produced:
[2026-02-09 12:07:01] -rw------- 1 boinc boinc 256618243  9. Feb 12:05 shared/HITS.pool.root.1
[2026-02-09 12:07:01]  *** Contents of shared directory: ***
[2026-02-09 12:07:01] total 883968
[2026-02-09 12:07:01] -rw-r--r-- 2 boinc boinc 646247290  9. Feb 09:30 ATLAS.root_0
[2026-02-09 12:07:01] -rw-r--r-- 2 boinc boinc    597950  9. Feb 09:30 input.tar.gz
[2026-02-09 12:07:01] -rw-r--r-- 2 boinc boinc     15845  9. Feb 09:30 start_atlas.sh
[2026-02-09 12:07:01] -rw------- 1 boinc boinc 256618243  9. Feb 12:05 HITS.pool.root.1
[2026-02-09 12:07:01] -rw------- 1 boinc boinc   1699840  9. Feb 12:07 result.tar.gz
12:07:03 (3547633): run_atlas exited; CPU time 53281.587416
12:07:03 (3547633): called boinc_finish(0)

</stderr_txt>
]]>

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