Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:14:06 (538042): wrapper (7.7.26015): starting
20:14:06 (538042): wrapper: running run_atlas (--nthreads 6)
[2026-02-07 20:14:06] Arguments: --nthreads 6
[2026-02-07 20:14:06] Threads: 6
[2026-02-07 20:14:06] Checking for CVMFS
[2026-02-07 20:14:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 20:14:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 20:14:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 20:14:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 20:14:08] 2.13.3.0 329939 177 61152 155994 3 9 3875923 4096001 0 130560 0 43027 85.033 729079 273 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-07 20:14:08] CVMFS is ok
[2026-02-07 20:14:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 20:14:08] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-07 20:14:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-07 20:14:08] Further information can be found at the LHC@home message board.
[2026-02-07 20:14:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 20:14:08] Checking for apptainer binary...
[2026-02-07 20:14:08] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2026-02-07 20:14:08] apptainer is not installed, using version from CVMFS
[2026-02-07 20:14:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 20:14:08] cachyos
[2026-02-07 20:14:08] apptainer works
[2026-02-07 20:14:08] Set ATHENA_PROC_NUMBER=6
[2026-02-07 20:14:08] Set ATHENA_CORE_NUMBER=6
[2026-02-07 20:14:08] Starting ATLAS job with PandaID=7000497089
[2026-02-07 20:14:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 22:30:42]  *** The last 200 lines of the pilot log: ***
[2026-02-07 22:30:42] 2026-02-07 21:29:44,781 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-07 22:30:42] 2026-02-07 21:29:44,781 | INFO     | this job has now completed (state=finished)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,782 | INFO     | log transfer has been attempted: DONE
[2026-02-07 22:30:42] 2026-02-07 21:29:44,782 | INFO     | job 7000497089 has finished - writing final server update
[2026-02-07 22:30:42] 2026-02-07 21:29:44,782 | INFO     | total number of processed events: 400 (read)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,785 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7000497089/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,785 | INFO     | extracted standard info from prmon json
[2026-02-07 22:30:42] 2026-02-07 21:29:44,785 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 22:30:42] 2026-02-07 21:29:44,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 22:30:42] 2026-02-07 21:29:44,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 22:30:42] 2026-02-07 21:29:44,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 22:30:42] 2026-02-07 21:29:44,788 | INFO     | fitting pss+swap vs Time
[2026-02-07 22:30:42] 2026-02-07 21:29:44,789 | INFO     | sum of square deviations: 729472282.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,789 | INFO     | sum of deviations: -34422684117.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,789 | INFO     | mean x: 1770495707.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,789 | INFO     | mean y: 2661530.5037593986
[2026-02-07 22:30:42] 2026-02-07 21:29:44,790 | INFO     | intersect: 83549652905.51749
[2026-02-07 22:30:42] 2026-02-07 21:29:44,790 | INFO     | chi2: 1.4825264642142422
[2026-02-07 22:30:42] 2026-02-07 21:29:44,790 | INFO     | sum of square deviations: 650252192.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,790 | INFO     | sum of deviations: -31689090781.5
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | mean x: 1770495554.5
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | mean y: 2666795.2421875
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | intersect: 86285181556.51912
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | chi2: 1.4765448686718405
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | current chi2=1.4765448686718405 (change=0.4034731039740293 %)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | right removable region: 127
[2026-02-07 22:30:42] 2026-02-07 21:29:44,791 | INFO     | sum of square deviations: 650252192.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | sum of deviations: -50079968154.5
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | mean x: 1770495859.5
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | mean y: 2690986.5859375
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | intersect: 136359595818.72545
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | chi2: 0.2348936422898744
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | current chi2=0.2348936422898744 (change=84.15585502452592 %)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,792 | INFO     | sum of square deviations: 576985702.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | sum of deviations: -46417333412.00001
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | mean x: 1770496012.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | mean y: 2683343.3577235774
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | intersect: 142435508643.45566
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | chi2: 0.22845019235003197
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | current chi2=0.22845019235003197 (change=2.743135095964313 %)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | left removable region: 20
[2026-02-07 22:30:42] 2026-02-07 21:29:44,793 | INFO     | sum of square deviations: 379832238.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | sum of deviations: -34633341822.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | mean x: 1770496134.0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | mean y: 2669721.4392523365
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | intersect: 161437618282.47083
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | chi2: 0.20653243824848225
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | current memory leak: -91.18 B/s (using 107 data points, chi2=0.21)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,794 | INFO     | could have reported an average CPU frequency of 2599 MHz (8 samples)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | ..............................
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . Timing measurements:
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . get job = 0 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . initial setup = 4 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . payload setup = 3 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . stage-in = 0 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . payload execution = 8100 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . stage-out = 0 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | . log creation = 0 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,795 | INFO     | ..............................
[2026-02-07 22:30:42] 2026-02-07 21:29:44,881 | INFO     | 
[2026-02-07 22:30:42] 2026-02-07 21:29:44,881 | INFO     | job summary report
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | --------------------------------------------------
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | PanDA job id: 7000497089
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | task id: 48508763
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | errors: (none)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | pilot state: finished 
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | transexitcode: 0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | exeerrorcode: 0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | exeerrordiag: 
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | exitcode: 0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | exitmsg: OK
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | cpuconsumptiontime: 46417 s
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | nevents: 400
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | neventsw: 0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | pid: 547143
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | pgrp: 547143
[2026-02-07 22:30:42] 2026-02-07 21:29:44,882 | INFO     | corecount: 6
[2026-02-07 22:30:42] 2026-02-07 21:29:44,883 | INFO     | event service: False
[2026-02-07 22:30:42] 2026-02-07 21:29:44,883 | INFO     | sizes: {0: 2282689, 1: 2283150, 11: 2283150, 8107: 2311064, 8108: 2311063, 8109: 2320117, 8110: 2320301, 8111: 2320495}
[2026-02-07 22:30:42] 2026-02-07 21:29:44,883 | INFO     | --------------------------------------------------
[2026-02-07 22:30:42] 2026-02-07 21:29:44,883 | INFO     | 
[2026-02-07 22:30:42] 2026-02-07 21:29:44,883 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-07 22:30:42] 2026-02-07 21:29:44,895 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,896 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | job 7000497089 has completed (purged errors)
[2026-02-07 22:30:42] 2026-02-07 21:29:44,897 | INFO     | overall cleanup function is called
[2026-02-07 22:30:42] 2026-02-07 21:29:45,932 | INFO     | --- collectZombieJob: --- 10, [547143]
[2026-02-07 22:30:42] 2026-02-07 21:29:45,932 | INFO     | zombie collector waiting for pid 547143
[2026-02-07 22:30:42] 2026-02-07 21:29:45,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 22:30:42] 2026-02-07 21:29:45,932 | INFO     | collected zombie processes
[2026-02-07 22:30:42] 2026-02-07 21:29:45,932 | INFO     | will attempt to kill all subprocesses of pid=547143
[2026-02-07 22:30:42] 2026-02-07 21:29:46,049 | INFO     | process IDs to be killed: [547143] (in reverse order)
[2026-02-07 22:30:42] 2026-02-07 21:29:46,088 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 22:30:42] 2026-02-07 21:29:46,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 22:30:42] 2026-02-07 21:29:46,091 | INFO     | did not find any defunct processes belonging to 547143
[2026-02-07 22:30:42] 2026-02-07 21:29:46,094 | INFO     | did not find any defunct processes belonging to 547143
[2026-02-07 22:30:42] 2026-02-07 21:29:46,094 | INFO     | ready for new job
[2026-02-07 22:30:42] 2026-02-07 21:29:46,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 22:30:42] 2026-02-07 21:29:46,096 | INFO     | **************************************
[2026-02-07 22:30:42] 2026-02-07 21:29:46,096 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 22:30:42] 2026-02-07 21:29:46,097 | INFO     | **************************************
[2026-02-07 22:30:42] 2026-02-07 21:29:46,097 | INFO     | 
[2026-02-07 22:30:42] 2026-02-07 21:29:46,097 | INFO     | architecture information:
[2026-02-07 22:30:42] 2026-02-07 21:29:46,098 | INFO     | executing command: cat /etc/os-release
[2026-02-07 22:30:42] 2026-02-07 21:29:46,108 | INFO     | cat /etc/os-release:
[2026-02-07 22:30:42] NAME="CentOS Linux"
[2026-02-07 22:30:42] VERSION="7 (Core)"
[2026-02-07 22:30:42] ID="centos"
[2026-02-07 22:30:42] ID_LIKE="rhel fedora"
[2026-02-07 22:30:42] VERSION_ID="7"
[2026-02-07 22:30:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 22:30:42] ANSI_COLOR="0;31"
[2026-02-07 22:30:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 22:30:42] HOME_URL="https://www.centos.org/"
[2026-02-07 22:30:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 22:30:42] 
[2026-02-07 22:30:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 22:30:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 22:30:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 22:30:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 22:30:42] 
[2026-02-07 22:30:42] 2026-02-07 21:29:46,109 | INFO     | **************************************
[2026-02-07 22:30:42] 2026-02-07 21:29:46,531 | WARNING  | process 547143 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 22:30:42] 2026-02-07 21:29:46,603 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 22:30:42] 2026-02-07 21:29:46,611 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-07 22:30:42] 2026-02-07 21:29:46,649 | INFO     | sufficient remaining disk space (6687817728 B)
[2026-02-07 22:30:42] 2026-02-07 21:29:46,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 22:30:42] 2026-02-07 21:29:46,650 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 22:30:42] 2026-02-07 21:29:46,650 | INFO     | update_server=False
[2026-02-07 22:30:42] 2026-02-07 21:29:46,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 22:30:42] 2026-02-07 21:29:46,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 22:30:42] 2026-02-07 21:29:46,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 22:30:42] 2026-02-07 21:29:46,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 22:30:42] 2026-02-07 21:29:46,698 | INFO     | number of running child processes to parent process 547143: 1
[2026-02-07 22:30:42] 2026-02-07 21:29:46,698 | INFO     | maximum number of monitored processes: 6
[2026-02-07 22:30:42] 2026-02-07 21:29:46,698 | INFO     | aborting job monitoring since job object (job id=7000497089) has expired
[2026-02-07 22:30:42] 2026-02-07 21:29:46,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 22:30:42] 2026-02-07 21:29:46,698 | INFO     | will abort loop
[2026-02-07 22:30:42] 2026-02-07 21:29:47,021 | INFO     | all data control threads have been joined
[2026-02-07 22:30:42] 2026-02-07 21:29:47,651 | INFO     | [job] queue monitor thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:47,654 | INFO     | all job control threads have been joined
[2026-02-07 22:30:42] 2026-02-07 21:29:47,655 | INFO     | [job] retrieve thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:47,703 | INFO     | [job] job monitor thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:47,825 | INFO     | all payload control threads have been joined
[2026-02-07 22:30:42] 2026-02-07 21:29:47,915 | INFO     | [payload] validate_post thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,027 | INFO     | [data] control thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,077 | INFO     | [job] validate thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,186 | INFO     | job.realtimelogging is not enabled
[2026-02-07 22:30:42] 2026-02-07 21:29:48,278 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,460 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,460 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,656 | INFO     | [data] copytool_out thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,659 | INFO     | [job] control thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,700 | INFO     | [data] copytool_in thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:48,830 | INFO     | [payload] control thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:49,036 | INFO     | [payload] failed_post thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:49,190 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:29:50,657 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 22:30:42] 2026-02-07 21:30:16,993 | INFO     | PID=542410 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 22:30:42] 2026-02-07 21:30:16,994 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 22:30:42] 2026-02-07 21:30:16,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 22:30:42] 2026-02-07 21:30:16,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 22:30:42] 2026-02-07 21:30:36,292 | INFO     | [monitor] cgroup control has ended
[2026-02-07 22:30:42] 2026-02-07 21:30:37,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010604132160)>', '<ExcThread(monitor, started 140010246346496)>']
[2026-02-07 22:30:42] 2026-02-07 21:30:38,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 22:30:42] 2026-02-07 21:30:38,097 | INFO     | [monitor] control thread has ended
[2026-02-07 22:30:42] 2026-02-07 21:30:42,143 | INFO     | all workflow threads have been joined
[2026-02-07 22:30:42] 2026-02-07 21:30:42,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 22:30:42] 2026-02-07 21:30:42,144 | INFO     | traces error code: 0
[2026-02-07 22:30:42] 2026-02-07 21:30:42,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 22:30:42] 2026-02-07 21:30:42,255 [wrapper] ==== pilot stdout END ====
[2026-02-07 22:30:42] 2026-02-07 21:30:42,258 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 22:30:42] 2026-02-07 21:30:42,260 [wrapper] pilotpid: 542410
[2026-02-07 22:30:42] 2026-02-07 21:30:42,262 [wrapper] Pilot exit status: 0
[2026-02-07 22:30:42] 2026-02-07 21:30:42,270 [wrapper] pandaids: 7000497089
[2026-02-07 22:30:42] 2026-02-07 21:30:42,310 [wrapper] cleanup supervisor_pilot  684243 542411
[2026-02-07 22:30:42] 2026-02-07 21:30:42,313 [wrapper] Test setup, not cleaning
[2026-02-07 22:30:42] 2026-02-07 21:30:42,315 [wrapper] apfmon messages muted
[2026-02-07 22:30:42] 2026-02-07 21:30:42,317 [wrapper] ==== wrapper stdout END ====
[2026-02-07 22:30:42] 2026-02-07 21:30:42,320 [wrapper] ==== wrapper stderr END ====
[2026-02-07 22:30:42]  *** Error codes and diagnostics ***
[2026-02-07 22:30:42]     "exeErrorCode": 0,
[2026-02-07 22:30:42]     "exeErrorDiag": "",
[2026-02-07 22:30:42]     "pilotErrorCode": 0,
[2026-02-07 22:30:42]     "pilotErrorDiag": "",
[2026-02-07 22:30:42]  *** Listing of results directory ***
[2026-02-07 22:30:42] total 947980
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc    584627  7. Feb 10:20 pilot3.tar.gz
[2026-02-07 22:30:42] -rwx------ 1 boinc boinc     36322  7. Feb 10:24 runpilot2-wrapper.sh
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc      5111  7. Feb 10:27 queuedata.json
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc       100  7. Feb 20:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 22:30:42] -rwxr-xr-x 1 boinc boinc      7986  7. Feb 20:14 run_atlas
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc       105  7. Feb 20:14 job.xml
[2026-02-07 22:30:42] -rw-r--r-- 2 boinc boinc 682400093  7. Feb 20:14 EVNT.48508760._000025.pool.root.1
[2026-02-07 22:30:42] drwxrwx--x 1 boinc boinc        76  7. Feb 20:14 shared
[2026-02-07 22:30:42] -rw-r--r-- 2 boinc boinc    597942  7. Feb 20:14 input.tar.gz
[2026-02-07 22:30:42] -rw-r--r-- 2 boinc boinc     15845  7. Feb 20:14 start_atlas.sh
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc         0  7. Feb 20:14 boinc_setup_complete
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc      8878  7. Feb 20:14 init_data.xml
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc         0  7. Feb 20:14 boinc_lockfile
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc      2546  7. Feb 20:14 pandaJob.out
[2026-02-07 22:30:42] -rw------- 1 boinc boinc   1009502  7. Feb 20:14 agis_schedconf.cvmfs.json
[2026-02-07 22:30:42] -rw------- 1 boinc boinc   1513088  7. Feb 20:14 agis_ddmendpoints.agis.ALL.json
[2026-02-07 22:30:42] -rw------- 1 boinc boinc       409  7. Feb 20:14 workernode_map.json
[2026-02-07 22:30:42] drwx------ 1 boinc boinc       414  7. Feb 20:14 pilot3
[2026-02-07 22:30:42] -rw------- 1 boinc boinc 281446339  7. Feb 22:29 HITS.48508763._001156.pool.root.1
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc       530  7. Feb 22:29 boinc_task_state.xml
[2026-02-07 22:30:42] -rw------- 1 boinc boinc      1036  7. Feb 22:29 memory_monitor_summary.json
[2026-02-07 22:30:42] -rw------- 1 boinc boinc    337185  7. Feb 22:29 log.48508763._001156.job.log.tgz.1
[2026-02-07 22:30:42] -rw------- 1 boinc boinc      6294  7. Feb 22:29 heartbeat.json
[2026-02-07 22:30:42] -rw------- 1 boinc boinc        95  7. Feb 22:30 pilot_heartbeat.json
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc      8192  7. Feb 22:30 boinc_mmap_file
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc        27  7. Feb 22:30 wrapper_checkpoint.txt
[2026-02-07 22:30:42] -rw------- 1 boinc boinc      5333  7. Feb 22:30 pilotlog.txt
[2026-02-07 22:30:42] -rw------- 1 boinc boinc   1144609  7. Feb 22:30 log.48508763._001156.job.log.1
[2026-02-07 22:30:42] -rw------- 1 boinc boinc       357  7. Feb 22:30 output.list
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc       620  7. Feb 22:30 runtime_log
[2026-02-07 22:30:42] -rw------- 1 boinc boinc   1495040  7. Feb 22:30 result.tar.gz
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc      8773  7. Feb 22:30 runtime_log.err
[2026-02-07 22:30:42] -rw------- 1 boinc boinc       649  7. Feb 22:30 bAgLDmBjt88n9Rq4apOajLDm4fhM0noT9bVooX4SDmHkaKDmg8WvVo.diag
[2026-02-07 22:30:42] -rw-r--r-- 1 boinc boinc     21411  7. Feb 22:30 stderr.txt
[2026-02-07 22:30:42] HITS file was successfully produced:
[2026-02-07 22:30:42] -rw------- 1 boinc boinc 281446339  7. Feb 22:29 shared/HITS.pool.root.1
[2026-02-07 22:30:42]  *** Contents of shared directory: ***
[2026-02-07 22:30:42] total 943320
[2026-02-07 22:30:42] -rw-r--r-- 2 boinc boinc 682400093  7. Feb 20:14 ATLAS.root_0
[2026-02-07 22:30:42] -rw-r--r-- 2 boinc boinc    597942  7. Feb 20:14 input.tar.gz
[2026-02-07 22:30:42] -rw-r--r-- 2 boinc boinc     15845  7. Feb 20:14 start_atlas.sh
[2026-02-07 22:30:42] -rw------- 1 boinc boinc 281446339  7. Feb 22:29 HITS.pool.root.1
[2026-02-07 22:30:42] -rw------- 1 boinc boinc   1495040  7. Feb 22:30 result.tar.gz
22:30:43 (538042): run_atlas exited; CPU time 46475.314609
22:30:43 (538042): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN