Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:21:21 (2983274): wrapper (7.7.26015): starting
00:21:21 (2983274): wrapper: running run_atlas (--nthreads 6)
[2026-02-09 00:21:21] Arguments: --nthreads 6
[2026-02-09 00:21:21] Threads: 6
[2026-02-09 00:21:21] Checking for CVMFS
[2026-02-09 00:21:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-09 00:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-09 00:21:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-09 00:21:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-09 00:21:23] 2.13.3.0 329939 1864 61448 156037 3 49 3665240 4096001 0 130560 0 672878 97.852 1978510 594 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-09 00:21:23] CVMFS is ok
[2026-02-09 00:21:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-09 00:21:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-09 00:21:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-09 00:21:23] Further information can be found at the LHC@home message board.
[2026-02-09 00:21:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-09 00:21:23] Checking for apptainer binary...
[2026-02-09 00:21:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2026-02-09 00:21:23] apptainer is not installed, using version from CVMFS
[2026-02-09 00:21:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-09 00:21:23] cachyos
[2026-02-09 00:21:23] apptainer works
[2026-02-09 00:21:23] Set ATHENA_PROC_NUMBER=6
[2026-02-09 00:21:23] Set ATHENA_CORE_NUMBER=6
[2026-02-09 00:21:23] Starting ATLAS job with PandaID=7000739054
[2026-02-09 00:21:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-09 02:23:52]  *** The last 200 lines of the pilot log: ***
[2026-02-09 02:23:52] 2026-02-09 01:22:48,572 | INFO     | job 7000739054 has state=finished
[2026-02-09 02:23:52] 2026-02-09 01:22:48,572 | INFO     | preparing for final server update for job 7000739054 in state='finished'
[2026-02-09 02:23:52] 2026-02-09 01:22:48,973 | INFO     | time since job start (7272s) is within the limit (349056.0s)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,237 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,237 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7000739054/jobReport.json
[2026-02-09 02:23:52] 2026-02-09 01:22:49,239 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-02-09 02:23:52] 2026-02-09 01:22:49,240 | INFO     | this job has now completed (state=finished)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,240 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,240 | INFO     | log transfer has been attempted: DONE
[2026-02-09 02:23:52] 2026-02-09 01:22:49,240 | INFO     | job 7000739054 has finished - writing final server update
[2026-02-09 02:23:52] 2026-02-09 01:22:49,240 | INFO     | total number of processed events: 400 (read)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,243 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7000739054/memory_monitor_summary.json (trf name=prmon)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,244 | INFO     | extracted standard info from prmon json
[2026-02-09 02:23:52] 2026-02-09 01:22:49,244 | INFO     | extracted standard memory fields from prmon json
[2026-02-09 02:23:52] 2026-02-09 01:22:49,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-09 02:23:52] 2026-02-09 01:22:49,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-09 02:23:52] 2026-02-09 01:22:49,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-09 02:23:52] 2026-02-09 01:22:49,246 | INFO     | fitting pss+swap vs Time
[2026-02-09 02:23:52] 2026-02-09 01:22:49,247 | INFO     | sum of square deviations: 522502820.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,247 | INFO     | sum of deviations: -27844541228.999992
[2026-02-09 02:23:52] 2026-02-09 01:22:49,248 | INFO     | mean x: 1770596513.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,248 | INFO     | mean y: 2657132.3949579834
[2026-02-09 02:23:52] 2026-02-09 01:22:49,248 | INFO     | intersect: 94358985402.83783
[2026-02-09 02:23:52] 2026-02-09 01:22:49,248 | INFO     | chi2: 1.3658645380140342
[2026-02-09 02:23:52] 2026-02-09 01:22:49,248 | INFO     | sum of square deviations: 459366752.5
[2026-02-09 02:23:52] 2026-02-09 01:22:49,249 | INFO     | sum of deviations: -25261791042.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,249 | INFO     | mean x: 1770596360.5
[2026-02-09 02:23:52] 2026-02-09 01:22:49,249 | INFO     | mean y: 2663374.4210526315
[2026-02-09 02:23:52] 2026-02-09 01:22:49,249 | INFO     | intersect: 97372433901.46132
[2026-02-09 02:23:52] 2026-02-09 01:22:49,249 | INFO     | chi2: 1.360732050691224
[2026-02-09 02:23:52] 2026-02-09 01:22:49,249 | INFO     | current chi2=1.360732050691224 (change=0.37576840015722746 %)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,250 | INFO     | right removable region: 113
[2026-02-09 02:23:52] 2026-02-09 01:22:49,250 | INFO     | sum of square deviations: 459366752.5
[2026-02-09 02:23:52] 2026-02-09 01:22:49,250 | INFO     | sum of deviations: -39639701583.49999
[2026-02-09 02:23:52] 2026-02-09 01:22:49,250 | INFO     | mean x: 1770596665.5
[2026-02-09 02:23:52] 2026-02-09 01:22:49,251 | INFO     | mean y: 2684737.6228070175
[2026-02-09 02:23:52] 2026-02-09 01:22:49,251 | INFO     | intersect: 152791111551.68607
[2026-02-09 02:23:52] 2026-02-09 01:22:49,251 | INFO     | chi2: 0.20547436958071588
[2026-02-09 02:23:52] 2026-02-09 01:22:49,251 | INFO     | current chi2=0.20547436958071588 (change=84.95646062533584 %)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,251 | INFO     | sum of square deviations: 401533110.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,252 | INFO     | sum of deviations: -35992465620.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,252 | INFO     | mean x: 1770596818.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,252 | INFO     | mean y: 2675087.1651376146
[2026-02-09 02:23:52] 2026-02-09 01:22:49,252 | INFO     | intersect: 158714730236.8548
[2026-02-09 02:23:52] 2026-02-09 01:22:49,252 | INFO     | chi2: 0.20156917656219542
[2026-02-09 02:23:52] 2026-02-09 01:22:49,252 | INFO     | current chi2=0.20156917656219542 (change=1.9005742791615665 %)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,253 | INFO     | left removable region: 20
[2026-02-09 02:23:52] 2026-02-09 01:22:49,253 | INFO     | sum of square deviations: 249388862.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,253 | INFO     | sum of deviations: -24910557494.999996
[2026-02-09 02:23:52] 2026-02-09 01:22:49,253 | INFO     | mean x: 1770596940.0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,253 | INFO     | mean y: 2657403.193548387
[2026-02-09 02:23:52] 2026-02-09 01:22:49,253 | INFO     | intersect: 176861224865.36456
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | chi2: 0.1847999694553691
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | current memory leak: -99.89 B/s (using 93 data points, chi2=0.18)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | could have reported an average CPU frequency of 2713 MHz (8 samples)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | ..............................
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | . Timing measurements:
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | . get job = 0 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,254 | INFO     | . initial setup = 4 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,255 | INFO     | . payload setup = 3 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,255 | INFO     | . stage-in = 0 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,255 | INFO     | . payload execution = 7247 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,255 | INFO     | . stage-out = 0 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,255 | INFO     | . log creation = 0 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,255 | INFO     | ..............................
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | 
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | job summary report
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | --------------------------------------------------
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | PanDA job id: 7000739054
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | task id: 48431113
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | errors: (none)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | pilot state: finished 
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | transexitcode: 0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | exeerrorcode: 0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | exeerrordiag: 
[2026-02-09 02:23:52] 2026-02-09 01:22:49,346 | INFO     | exitcode: 0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | exitmsg: OK
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | cpuconsumptiontime: 41867 s
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | nevents: 400
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | neventsw: 0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | pid: 2992382
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | pgrp: 2992382
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | corecount: 6
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | event service: False
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | sizes: {0: 2282686, 1: 2283147, 11: 2283147, 7255: 2310593, 7256: 2319591, 7259: 2319647, 7262: 2319969}
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | --------------------------------------------------
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | 
[2026-02-09 02:23:52] 2026-02-09 01:22:49,347 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,362 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,362 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-09 02:23:52] 2026-02-09 01:22:49,362 | INFO     | job 7000739054 has completed (purged errors)
[2026-02-09 02:23:52] 2026-02-09 01:22:49,362 | INFO     | overall cleanup function is called
[2026-02-09 02:23:52] 2026-02-09 01:22:50,407 | INFO     | --- collectZombieJob: --- 10, [2992382]
[2026-02-09 02:23:52] 2026-02-09 01:22:50,407 | INFO     | zombie collector waiting for pid 2992382
[2026-02-09 02:23:52] 2026-02-09 01:22:50,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-09 02:23:52] 2026-02-09 01:22:50,407 | INFO     | collected zombie processes
[2026-02-09 02:23:52] 2026-02-09 01:22:50,407 | INFO     | will attempt to kill all subprocesses of pid=2992382
[2026-02-09 02:23:52] 2026-02-09 01:22:50,557 | INFO     | process IDs to be killed: [2992382] (in reverse order)
[2026-02-09 02:23:52] 2026-02-09 01:22:50,600 | WARNING  | found no corresponding commands to process id(s)
[2026-02-09 02:23:52] 2026-02-09 01:22:50,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-09 02:23:52] 2026-02-09 01:22:50,605 | INFO     | did not find any defunct processes belonging to 2992382
[2026-02-09 02:23:52] 2026-02-09 01:22:50,609 | INFO     | did not find any defunct processes belonging to 2992382
[2026-02-09 02:23:52] 2026-02-09 01:22:50,609 | INFO     | ready for new job
[2026-02-09 02:23:52] 2026-02-09 01:22:50,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-09 02:23:52] 2026-02-09 01:22:50,610 | INFO     | **************************************
[2026-02-09 02:23:52] 2026-02-09 01:22:50,611 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-09 02:23:52] 2026-02-09 01:22:50,611 | INFO     | **************************************
[2026-02-09 02:23:52] 2026-02-09 01:22:50,611 | INFO     | 
[2026-02-09 02:23:52] 2026-02-09 01:22:50,611 | INFO     | architecture information:
[2026-02-09 02:23:52] 2026-02-09 01:22:50,612 | INFO     | executing command: cat /etc/os-release
[2026-02-09 02:23:52] 2026-02-09 01:22:50,623 | INFO     | cat /etc/os-release:
[2026-02-09 02:23:52] NAME="CentOS Linux"
[2026-02-09 02:23:52] VERSION="7 (Core)"
[2026-02-09 02:23:52] ID="centos"
[2026-02-09 02:23:52] ID_LIKE="rhel fedora"
[2026-02-09 02:23:52] VERSION_ID="7"
[2026-02-09 02:23:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-09 02:23:52] ANSI_COLOR="0;31"
[2026-02-09 02:23:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-09 02:23:52] HOME_URL="https://www.centos.org/"
[2026-02-09 02:23:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-09 02:23:52] 
[2026-02-09 02:23:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-09 02:23:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-09 02:23:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-09 02:23:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-09 02:23:52] 
[2026-02-09 02:23:52] 2026-02-09 01:22:50,623 | INFO     | **************************************
[2026-02-09 02:23:52] 2026-02-09 01:22:51,126 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | INFO     | sufficient remaining disk space (9104785408 B)
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | INFO     | current server update state: UPDATING_FINAL
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | INFO     | update_server=False
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-09 02:23:52] 2026-02-09 01:22:51,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-09 02:23:52] 2026-02-09 01:22:51,400 | INFO     | all job control threads have been joined
[2026-02-09 02:23:52] 2026-02-09 01:22:51,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-09 02:23:52] 2026-02-09 01:22:51,867 | INFO     | aborting loop
[2026-02-09 02:23:52] 2026-02-09 01:22:52,117 | INFO     | all data control threads have been joined
[2026-02-09 02:23:52] 2026-02-09 01:22:52,168 | INFO     | [job] queue monitor thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,168 | INFO     | [job] retrieve thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,325 | INFO     | all payload control threads have been joined
[2026-02-09 02:23:52] 2026-02-09 01:22:52,405 | INFO     | [job] control thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-09 02:23:52] 2026-02-09 01:22:52,580 | INFO     | [job] validate thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,756 | INFO     | [payload] validate_post thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,832 | INFO     | [job] create_data_payload thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,872 | INFO     | [job] job monitor thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:52,990 | INFO     | [payload] validate_pre thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:53,122 | INFO     | [data] control thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:53,169 | INFO     | [data] copytool_out thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:53,289 | INFO     | [data] copytool_in thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:53,330 | INFO     | [payload] control thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:53,551 | INFO     | [payload] failed_post thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:53,600 | INFO     | [payload] execute_payloads thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:22:56,555 | INFO     | [data] queue_monitor thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:23:01,801 | INFO     | job.realtimelogging is not enabled
[2026-02-09 02:23:52] 2026-02-09 01:23:02,806 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-09 02:23:52] 2026-02-09 01:23:22,210 | INFO     | PID=2987565 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-09 02:23:52] 2026-02-09 01:23:22,210 | INFO     | found 0 job(s) in 20 queues
[2026-02-09 02:23:52] 2026-02-09 01:23:22,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-09 02:23:52] 2026-02-09 01:23:22,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-09 02:23:52] 2026-02-09 01:23:47,502 | INFO     | [monitor] cgroup control has ended
[2026-02-09 02:23:52] 2026-02-09 01:23:47,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225895421760)>', '<ExcThread(monitor, started 140225539974912)>']
[2026-02-09 02:23:52] 2026-02-09 01:23:48,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-09 02:23:52] 2026-02-09 01:23:48,333 | INFO     | [monitor] control thread has ended
[2026-02-09 02:23:52] 2026-02-09 01:23:52,606 | INFO     | all workflow threads have been joined
[2026-02-09 02:23:52] 2026-02-09 01:23:52,607 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-09 02:23:52] 2026-02-09 01:23:52,607 | INFO     | traces error code: 0
[2026-02-09 02:23:52] 2026-02-09 01:23:52,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-09 02:23:52] 2026-02-09 01:23:52,688 [wrapper] ==== pilot stdout END ====
[2026-02-09 02:23:52] 2026-02-09 01:23:52,690 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-09 02:23:52] 2026-02-09 01:23:52,692 [wrapper] pilotpid: 2987565
[2026-02-09 02:23:52] 2026-02-09 01:23:52,695 [wrapper] Pilot exit status: 0
[2026-02-09 02:23:52] 2026-02-09 01:23:52,703 [wrapper] pandaids: 7000739054
[2026-02-09 02:23:52] 2026-02-09 01:23:52,736 [wrapper] cleanup supervisor_pilot 3104243 2987566
[2026-02-09 02:23:52] 2026-02-09 01:23:52,738 [wrapper] Test setup, not cleaning
[2026-02-09 02:23:52] 2026-02-09 01:23:52,739 [wrapper] apfmon messages muted
[2026-02-09 02:23:52] 2026-02-09 01:23:52,742 [wrapper] ==== wrapper stdout END ====
[2026-02-09 02:23:52] 2026-02-09 01:23:52,744 [wrapper] ==== wrapper stderr END ====
[2026-02-09 02:23:52]  *** Error codes and diagnostics ***
[2026-02-09 02:23:52]     "exeErrorCode": 0,
[2026-02-09 02:23:52]     "exeErrorDiag": "",
[2026-02-09 02:23:52]     "pilotErrorCode": 0,
[2026-02-09 02:23:52]     "pilotErrorDiag": "",
[2026-02-09 02:23:52]  *** Listing of results directory ***
[2026-02-09 02:23:52] total 903832
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc      5111  7. Feb 12:17 queuedata.json
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc    584627  7. Feb 12:17 pilot3.tar.gz
[2026-02-09 02:23:52] -rwx------ 1 boinc boinc     36322  7. Feb 12:17 runpilot2-wrapper.sh
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc       100  9. Feb 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-09 02:23:52] -rwxr-xr-x 1 boinc boinc      7986  9. Feb 00:21 run_atlas
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc       105  9. Feb 00:21 job.xml
[2026-02-09 02:23:52] -rw-r--r-- 2 boinc boinc 658798370  9. Feb 00:21 EVNT.48431111._000088.pool.root.1
[2026-02-09 02:23:52] drwxrwx--x 1 boinc boinc        76  9. Feb 00:21 shared
[2026-02-09 02:23:52] -rw-r--r-- 2 boinc boinc    597954  9. Feb 00:21 input.tar.gz
[2026-02-09 02:23:52] -rw-r--r-- 2 boinc boinc     15845  9. Feb 00:21 start_atlas.sh
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc         0  9. Feb 00:21 boinc_setup_complete
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc      8912  9. Feb 00:21 init_data.xml
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc         0  9. Feb 00:21 boinc_lockfile
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc      2545  9. Feb 00:21 pandaJob.out
[2026-02-09 02:23:52] -rw------- 1 boinc boinc   1009496  9. Feb 00:21 agis_schedconf.cvmfs.json
[2026-02-09 02:23:52] -rw------- 1 boinc boinc   1513088  9. Feb 00:21 agis_ddmendpoints.agis.ALL.json
[2026-02-09 02:23:52] -rw------- 1 boinc boinc       418  9. Feb 00:21 workernode_map.json
[2026-02-09 02:23:52] drwx------ 1 boinc boinc       414  9. Feb 00:21 pilot3
[2026-02-09 02:23:52] -rw------- 1 boinc boinc 260021020  9. Feb 02:22 HITS.48431113._004460.pool.root.1
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc       530  9. Feb 02:22 boinc_task_state.xml
[2026-02-09 02:23:52] -rw------- 1 boinc boinc      1013  9. Feb 02:22 memory_monitor_summary.json
[2026-02-09 02:23:52] -rw------- 1 boinc boinc    356395  9. Feb 02:22 log.48431113._004460.job.log.tgz.1
[2026-02-09 02:23:52] -rw------- 1 boinc boinc        95  9. Feb 02:22 pilot_heartbeat.json
[2026-02-09 02:23:52] -rw------- 1 boinc boinc      6266  9. Feb 02:22 heartbeat.json
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc      8192  9. Feb 02:23 boinc_mmap_file
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc        27  9. Feb 02:23 wrapper_checkpoint.txt
[2026-02-09 02:23:52] -rw------- 1 boinc boinc      4815  9. Feb 02:23 pilotlog.txt
[2026-02-09 02:23:52] -rw------- 1 boinc boinc   1033288  9. Feb 02:23 log.48431113._004460.job.log.1
[2026-02-09 02:23:52] -rw------- 1 boinc boinc       357  9. Feb 02:23 output.list
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc       620  9. Feb 02:23 runtime_log
[2026-02-09 02:23:52] -rw------- 1 boinc boinc   1402880  9. Feb 02:23 result.tar.gz
[2026-02-09 02:23:52] -rw------- 1 boinc boinc       644  9. Feb 02:23 ZYjMDmCVv88n9Rq4apOajLDm4fhM0noT9bVooX4SDmzmaKDmtGIKQn.diag
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc      8773  9. Feb 02:23 runtime_log.err
[2026-02-09 02:23:52] -rw-r--r-- 1 boinc boinc     21406  9. Feb 02:23 stderr.txt
[2026-02-09 02:23:52] HITS file was successfully produced:
[2026-02-09 02:23:52] -rw------- 1 boinc boinc 260021020  9. Feb 02:22 shared/HITS.pool.root.1
[2026-02-09 02:23:52]  *** Contents of shared directory: ***
[2026-02-09 02:23:52] total 899260
[2026-02-09 02:23:52] -rw-r--r-- 2 boinc boinc 658798370  9. Feb 00:21 ATLAS.root_0
[2026-02-09 02:23:52] -rw-r--r-- 2 boinc boinc    597954  9. Feb 00:21 input.tar.gz
[2026-02-09 02:23:52] -rw-r--r-- 2 boinc boinc     15845  9. Feb 00:21 start_atlas.sh
[2026-02-09 02:23:52] -rw------- 1 boinc boinc 260021020  9. Feb 02:22 HITS.pool.root.1
[2026-02-09 02:23:52] -rw------- 1 boinc boinc   1402880  9. Feb 02:23 result.tar.gz
02:23:54 (2983274): run_atlas exited; CPU time 41962.566210
02:23:54 (2983274): called boinc_finish(0)

</stderr_txt>
]]>

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