Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:55:17 (1289359): wrapper (7.7.26015): starting
05:55:17 (1289359): wrapper: running run_atlas (--nthreads 6)
[2026-02-08 05:55:17] Arguments: --nthreads 6
[2026-02-08 05:55:17] Threads: 6
[2026-02-08 05:55:17] Checking for CVMFS
[2026-02-08 05:55:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 05:55:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 05:55:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 05:55:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 05:55:19] 2.13.3.0 329939 758 56212 156007 3 50 2350489 4096001 0 130560 0 253187 97.362 900154 330 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-08 05:55:19] CVMFS is ok
[2026-02-08 05:55:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 05:55:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-08 05:55:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-08 05:55:19] Further information can be found at the LHC@home message board.
[2026-02-08 05:55:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 05:55:19] Checking for apptainer binary...
[2026-02-08 05:55:19] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin)
[2026-02-08 05:55:19] apptainer is not installed, using version from CVMFS
[2026-02-08 05:55:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 05:55:22] cachyos
[2026-02-08 05:55:22] apptainer works
[2026-02-08 05:55:22] Set ATHENA_PROC_NUMBER=6
[2026-02-08 05:55:22] Set ATHENA_CORE_NUMBER=6
[2026-02-08 05:55:22] Starting ATLAS job with PandaID=7000323519
[2026-02-08 05:55:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 07:41:20]  *** The last 200 lines of the pilot log: ***
[2026-02-08 07:41:20] 2026-02-08 06:41:05,876 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 07:41:20] 2026-02-08 06:41:05,876 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 07:41:20] 2026-02-08 06:41:05,878 | INFO     | fitting pss+swap vs Time
[2026-02-08 07:41:20] 2026-02-08 06:41:05,878 | INFO     | sum of square deviations: 338804492.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,878 | INFO     | sum of deviations: 1654104730.9999974
[2026-02-08 07:41:20] 2026-02-08 06:41:05,879 | INFO     | mean x: 1770529701.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,879 | INFO     | mean y: 2479434.805825243
[2026-02-08 07:41:20] 2026-02-08 06:41:05,879 | INFO     | intersect: -8641566390.891521
[2026-02-08 07:41:20] 2026-02-08 06:41:05,879 | INFO     | chi2: 1.5219545851015073
[2026-02-08 07:41:20] 2026-02-08 06:41:05,879 | INFO     | sum of square deviations: 291817564.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | sum of deviations: 1780476235.0000002
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | mean x: 1770529548.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | mean y: 2479845.285714286
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | intersect: -10800111115.511404
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | chi2: 1.5242815577050026
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | current chi2=1.5242815577050026 (change=-0.15289369513875142 %)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,880 | INFO     | right removable region: 97
[2026-02-08 07:41:20] 2026-02-08 06:41:05,881 | INFO     | sum of square deviations: 291817564.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,881 | INFO     | sum of deviations: -10193257532.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,881 | INFO     | mean x: 1770529853.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,881 | INFO     | mean y: 2516599.7448979593
[2026-02-08 07:41:20] 2026-02-08 06:41:05,881 | INFO     | intersect: 61847549117.330025
[2026-02-08 07:41:20] 2026-02-08 06:41:05,882 | INFO     | chi2: 0.15177168913938782
[2026-02-08 07:41:20] 2026-02-08 06:41:05,882 | INFO     | current chi2=0.15177168913938782 (change=90.02784375926267 %)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,882 | INFO     | sum of square deviations: 249388862.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,882 | INFO     | sum of deviations: -5190059401.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,883 | INFO     | mean x: 1770530006.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,883 | INFO     | mean y: 2498583.5268817204
[2026-02-08 07:41:20] 2026-02-08 06:41:05,883 | INFO     | intersect: 36849195860.62054
[2026-02-08 07:41:20] 2026-02-08 06:41:05,883 | INFO     | chi2: 0.1038243103714851
[2026-02-08 07:41:20] 2026-02-08 06:41:05,883 | INFO     | current chi2=0.1038243103714851 (change=31.59178041687843 %)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,883 | INFO     | sum of square deviations: 211285822.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,884 | INFO     | sum of deviations: 237218172.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,884 | INFO     | mean x: 1770530158.5
[2026-02-08 07:41:20] 2026-02-08 06:41:05,884 | INFO     | mean y: 2476829.875
[2026-02-08 07:41:20] 2026-02-08 06:41:05,884 | INFO     | intersect: -1985360899.035676
[2026-02-08 07:41:20] 2026-02-08 06:41:05,884 | INFO     | chi2: 0.0012776165909031622
[2026-02-08 07:41:20] 2026-02-08 06:41:05,884 | INFO     | current chi2=0.0012776165909031622 (change=98.76944370125663 %)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | sum of square deviations: 177275882.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | sum of deviations: -26913322.00000007
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | mean x: 1770530311.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | mean y: 2478014.5542168673
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | intersect: 271272911.1476703
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | chi2: 0.0009695015364135521
[2026-02-08 07:41:20] 2026-02-08 06:41:05,885 | INFO     | current chi2=0.0009695015364135521 (change=24.116394283186313 %)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | left removable region: 40
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | sum of square deviations: 57407588.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | sum of deviations: -265585459.99999997
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | mean x: 1770530738.0
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | mean y: 2480533.6842105263
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | intersect: 8193509574.929933
[2026-02-08 07:41:20] 2026-02-08 06:41:05,886 | INFO     | chi2: 0.00021189777181747572
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | current memory leak: -4.63 B/s (using 57 data points, chi2=0.00)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | could have reported an average CPU frequency of 2799 MHz (7 samples)
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | ..............................
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | . Timing measurements:
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | . get job = 0 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | . initial setup = 9 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | . payload setup = 9 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,887 | INFO     | . stage-in = 0 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,888 | INFO     | . payload execution = 6273 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,888 | INFO     | . stage-out = 0 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,888 | INFO     | . log creation = 0 s
[2026-02-08 07:41:20] 2026-02-08 06:41:05,888 | INFO     | ..............................
[2026-02-08 07:41:20] 2026-02-08 06:41:06,187 | INFO     | 
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | job summary report
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | --------------------------------------------------
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | PanDA job id: 7000323519
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | task id: 48318034
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | errors: (none)
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | pilot state: finished 
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | transexitcode: 0
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | exeerrorcode: 0
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | exeerrordiag: 
[2026-02-08 07:41:20] 2026-02-08 06:41:06,188 | INFO     | exitcode: 0
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | exitmsg: OK
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | cpuconsumptiontime: 35528 s
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | nevents: 400
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | neventsw: 0
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | pid: 1300403
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | pgrp: 1300403
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | corecount: 6
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | event service: False
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | sizes: {0: 2281967, 1: 2283085, 12: 2283085, 6286: 2310053, 6287: 2319107, 6289: 2319245}
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | --------------------------------------------------
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | 
[2026-02-08 07:41:20] 2026-02-08 06:41:06,189 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-02-08 07:41:20] 2026-02-08 06:41:06,203 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,205 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 07:41:20] 2026-02-08 06:41:06,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,205 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 07:41:20] 2026-02-08 06:41:06,205 | INFO     | job 7000323519 has completed (purged errors)
[2026-02-08 07:41:20] 2026-02-08 06:41:06,205 | INFO     | overall cleanup function is called
[2026-02-08 07:41:20] 2026-02-08 06:41:07,019 | INFO     | PID=1294490 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 07:41:20] 2026-02-08 06:41:07,238 | INFO     | --- collectZombieJob: --- 10, [1300403]
[2026-02-08 07:41:20] 2026-02-08 06:41:07,238 | INFO     | zombie collector waiting for pid 1300403
[2026-02-08 07:41:20] 2026-02-08 06:41:07,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 07:41:20] 2026-02-08 06:41:07,238 | INFO     | collected zombie processes
[2026-02-08 07:41:20] 2026-02-08 06:41:07,238 | INFO     | will attempt to kill all subprocesses of pid=1300403
[2026-02-08 07:41:20] 2026-02-08 06:41:07,374 | INFO     | process IDs to be killed: [1300403] (in reverse order)
[2026-02-08 07:41:20] 2026-02-08 06:41:07,424 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 07:41:20] 2026-02-08 06:41:07,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 07:41:20] 2026-02-08 06:41:07,429 | INFO     | did not find any defunct processes belonging to 1300403
[2026-02-08 07:41:20] 2026-02-08 06:41:07,432 | INFO     | did not find any defunct processes belonging to 1300403
[2026-02-08 07:41:20] 2026-02-08 06:41:07,432 | INFO     | ready for new job
[2026-02-08 07:41:20] 2026-02-08 06:41:07,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 07:41:20] 2026-02-08 06:41:07,434 | INFO     | **************************************
[2026-02-08 07:41:20] 2026-02-08 06:41:07,434 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 07:41:20] 2026-02-08 06:41:07,434 | INFO     | **************************************
[2026-02-08 07:41:20] 2026-02-08 06:41:07,434 | INFO     | 
[2026-02-08 07:41:20] 2026-02-08 06:41:07,434 | INFO     | architecture information:
[2026-02-08 07:41:20] 2026-02-08 06:41:07,435 | INFO     | executing command: cat /etc/os-release
[2026-02-08 07:41:20] 2026-02-08 06:41:07,476 | INFO     | cat /etc/os-release:
[2026-02-08 07:41:20] NAME="CentOS Linux"
[2026-02-08 07:41:20] VERSION="7 (Core)"
[2026-02-08 07:41:20] ID="centos"
[2026-02-08 07:41:20] ID_LIKE="rhel fedora"
[2026-02-08 07:41:20] VERSION_ID="7"
[2026-02-08 07:41:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 07:41:20] ANSI_COLOR="0;31"
[2026-02-08 07:41:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 07:41:20] HOME_URL="https://www.centos.org/"
[2026-02-08 07:41:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 07:41:20] 
[2026-02-08 07:41:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 07:41:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 07:41:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 07:41:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 07:41:20] 
[2026-02-08 07:41:20] 2026-02-08 06:41:07,476 | INFO     | **************************************
[2026-02-08 07:41:20] 2026-02-08 06:41:07,978 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-02-08 07:41:20] 2026-02-08 06:41:07,988 | INFO     | sufficient remaining disk space (8848932864 B)
[2026-02-08 07:41:20] 2026-02-08 06:41:07,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 07:41:20] 2026-02-08 06:41:07,989 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 07:41:20] 2026-02-08 06:41:07,989 | INFO     | update_server=False
[2026-02-08 07:41:20] 2026-02-08 06:41:07,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 07:41:20] 2026-02-08 06:41:07,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 07:41:20] 2026-02-08 06:41:07,990 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 07:41:20] 2026-02-08 06:41:07,990 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 07:41:20] 2026-02-08 06:41:07,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 07:41:20] 2026-02-08 06:41:07,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 07:41:20] 2026-02-08 06:41:08,130 | INFO     | job.realtimelogging is not enabled
[2026-02-08 07:41:20] 2026-02-08 06:41:08,527 | INFO     | all job control threads have been joined
[2026-02-08 07:41:20] 2026-02-08 06:41:08,626 | INFO     | all payload control threads have been joined
[2026-02-08 07:41:20] 2026-02-08 06:41:08,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 07:41:20] 2026-02-08 06:41:08,671 | INFO     | aborting loop
[2026-02-08 07:41:20] 2026-02-08 06:41:08,874 | INFO     | all data control threads have been joined
[2026-02-08 07:41:20] 2026-02-08 06:41:08,993 | INFO     | [job] retrieve thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,251 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,261 | INFO     | [payload] validate_post thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,395 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,532 | INFO     | [job] control thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,632 | INFO     | [payload] control thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,662 | INFO     | [payload] failed_post thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,676 | INFO     | [job] job monitor thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,738 | INFO     | [data] copytool_in thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,879 | INFO     | [data] control thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:09,995 | INFO     | [data] copytool_out thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:10,393 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:10,426 | INFO     | [job] validate thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:10,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 07:41:20] 2026-02-08 06:41:10,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 07:41:20] 2026-02-08 06:41:11,979 | INFO     | [job] queue monitor thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:14,490 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 07:41:20] 2026-02-08 06:41:15,317 | INFO     | [monitor] cgroup control has ended
[2026-02-08 07:41:20] 2026-02-08 06:41:15,353 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777401464640)>', '<ExcThread(monitor, started 139776682354432)>']
[2026-02-08 07:41:20] 2026-02-08 06:41:16,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 07:41:20] 2026-02-08 06:41:16,025 | INFO     | [monitor] control thread has ended
[2026-02-08 07:41:20] 2026-02-08 06:41:20,378 | INFO     | all workflow threads have been joined
[2026-02-08 07:41:20] 2026-02-08 06:41:20,378 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 07:41:20] 2026-02-08 06:41:20,379 | INFO     | traces error code: 0
[2026-02-08 07:41:20] 2026-02-08 06:41:20,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 07:41:20] 2026-02-08 06:41:20,450 [wrapper] ==== pilot stdout END ====
[2026-02-08 07:41:20] 2026-02-08 06:41:20,451 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 07:41:20] 2026-02-08 06:41:20,453 [wrapper] pilotpid: 1294490
[2026-02-08 07:41:20] 2026-02-08 06:41:20,454 [wrapper] Pilot exit status: 0
[2026-02-08 07:41:20] 2026-02-08 06:41:20,461 [wrapper] pandaids: 7000323519
[2026-02-08 07:41:20] 2026-02-08 06:41:20,488 [wrapper] cleanup supervisor_pilot 1473956 1294492
[2026-02-08 07:41:20] 2026-02-08 06:41:20,490 [wrapper] Test setup, not cleaning
[2026-02-08 07:41:20] 2026-02-08 06:41:20,492 [wrapper] apfmon messages muted
[2026-02-08 07:41:20] 2026-02-08 06:41:20,493 [wrapper] ==== wrapper stdout END ====
[2026-02-08 07:41:20] 2026-02-08 06:41:20,495 [wrapper] ==== wrapper stderr END ====
[2026-02-08 07:41:20]  *** Error codes and diagnostics ***
[2026-02-08 07:41:20]     "exeErrorCode": 0,
[2026-02-08 07:41:20]     "exeErrorDiag": "",
[2026-02-08 07:41:20]     "pilotErrorCode": 0,
[2026-02-08 07:41:20]     "pilotErrorDiag": "",
[2026-02-08 07:41:20]  *** Listing of results directory ***
[2026-02-08 07:41:20] total 678520
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc    584627  7. Feb 10:20 pilot3.tar.gz
[2026-02-08 07:41:20] -rwx------ 1 boinc boinc     36322  7. Feb 10:23 runpilot2-wrapper.sh
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc      5111  7. Feb 10:27 queuedata.json
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc       100  8. Feb 05:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 07:41:20] -rwxr-xr-x 1 boinc boinc      7986  8. Feb 05:55 run_atlas
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc       105  8. Feb 05:55 job.xml
[2026-02-08 07:41:20] -rw-r--r-- 2 boinc boinc 500094864  8. Feb 05:55 EVNT.48318032._000210.pool.root.1
[2026-02-08 07:41:20] drwxrwx--x 1 boinc boinc        76  8. Feb 05:55 shared
[2026-02-08 07:41:20] -rw-r--r-- 2 boinc boinc    597952  8. Feb 05:55 input.tar.gz
[2026-02-08 07:41:20] -rw-r--r-- 2 boinc boinc     15845  8. Feb 05:55 start_atlas.sh
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc         0  8. Feb 05:55 boinc_setup_complete
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc      8877  8. Feb 05:55 init_data.xml
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc         0  8. Feb 05:55 boinc_lockfile
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc      2539  8. Feb 05:55 pandaJob.out
[2026-02-08 07:41:20] -rw------- 1 boinc boinc   1009518  8. Feb 05:55 agis_schedconf.cvmfs.json
[2026-02-08 07:41:20] -rw------- 1 boinc boinc   1513088  8. Feb 05:55 agis_ddmendpoints.agis.ALL.json
[2026-02-08 07:41:20] -rw------- 1 boinc boinc       408  8. Feb 05:56 workernode_map.json
[2026-02-08 07:41:20] drwx------ 1 boinc boinc       414  8. Feb 05:56 pilot3
[2026-02-08 07:41:20] -rw------- 1 boinc boinc        95  8. Feb 07:40 pilot_heartbeat.json
[2026-02-08 07:41:20] -rw------- 1 boinc boinc 188299602  8. Feb 07:40 HITS.48318034._011071.pool.root.1
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc       530  8. Feb 07:40 boinc_task_state.xml
[2026-02-08 07:41:20] -rw------- 1 boinc boinc      1022  8. Feb 07:41 memory_monitor_summary.json
[2026-02-08 07:41:20] -rw------- 1 boinc boinc    336351  8. Feb 07:41 log.48318034._011071.job.log.tgz.1
[2026-02-08 07:41:20] -rw------- 1 boinc boinc      6268  8. Feb 07:41 heartbeat.json
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc      8192  8. Feb 07:41 boinc_mmap_file
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc        27  8. Feb 07:41 wrapper_checkpoint.txt
[2026-02-08 07:41:20] -rw------- 1 boinc boinc      4619  8. Feb 07:41 pilotlog.txt
[2026-02-08 07:41:20] -rw------- 1 boinc boinc    903100  8. Feb 07:41 log.48318034._011071.job.log.1
[2026-02-08 07:41:20] -rw------- 1 boinc boinc       357  8. Feb 07:41 output.list
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc       620  8. Feb 07:41 runtime_log
[2026-02-08 07:41:20] -rw------- 1 boinc boinc   1259520  8. Feb 07:41 result.tar.gz
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc      8773  8. Feb 07:41 runtime_log.err
[2026-02-08 07:41:20] -rw------- 1 boinc boinc       649  8. Feb 07:41 B68KDmmit88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmm1aKDmoRshRn.diag
[2026-02-08 07:41:20] -rw-r--r-- 1 boinc boinc     21067  8. Feb 07:41 stderr.txt
[2026-02-08 07:41:20] HITS file was successfully produced:
[2026-02-08 07:41:20] -rw------- 1 boinc boinc 188299602  8. Feb 07:40 shared/HITS.pool.root.1
[2026-02-08 07:41:20]  *** Contents of shared directory: ***
[2026-02-08 07:41:20] total 674096
[2026-02-08 07:41:20] -rw-r--r-- 2 boinc boinc 500094864  8. Feb 05:55 ATLAS.root_0
[2026-02-08 07:41:20] -rw-r--r-- 2 boinc boinc    597952  8. Feb 05:55 input.tar.gz
[2026-02-08 07:41:20] -rw-r--r-- 2 boinc boinc     15845  8. Feb 05:55 start_atlas.sh
[2026-02-08 07:41:20] -rw------- 1 boinc boinc 188299602  8. Feb 07:40 HITS.pool.root.1
[2026-02-08 07:41:20] -rw------- 1 boinc boinc   1259520  8. Feb 07:41 result.tar.gz
07:41:21 (1289359): run_atlas exited; CPU time 35625.797962
07:41:21 (1289359): called boinc_finish(0)

</stderr_txt>
]]>

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