Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
10:31:39 (1110403): wrapper (7.7.26015): starting
10:31:39 (1110403): wrapper: running run_atlas (--nthreads 12)
[2026-02-08 10:31:39] Arguments: --nthreads 12
[2026-02-08 10:31:39] Threads: 12
[2026-02-08 10:31:39] Checking for CVMFS
[2026-02-08 10:31:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 10:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 10:31:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 10:31:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 10:31:41] 2.12.7.0 5195 1925 65768 156024 1 50 3170164 4194304 917 130560 0 2045321 99.994 63650 2125 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-02-08 10:31:41] CVMFS is ok
[2026-02-08 10:31:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 10:31:41] Checking for apptainer binary...
[2026-02-08 10:31:41] apptainer is not installed, using version from CVMFS
[2026-02-08 10:31:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 10:31:41] Trebeth
[2026-02-08 10:31:41] apptainer works
[2026-02-08 10:31:41] Set ATHENA_PROC_NUMBER=12
[2026-02-08 10:31:41] Set ATHENA_CORE_NUMBER=12
[2026-02-08 10:31:41] Starting ATLAS job with PandaID=7000487353
[2026-02-08 10:31:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 11:46:08]  *** The last 200 lines of the pilot log: ***
[2026-02-08 11:46:08]  filetype=log
[2026-02-08 11:46:08]  guid=43370572-0f3e-474a-9d1e-391e411d6ec5
[2026-02-08 11:46:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 11:46:08]  is_altstaged=None
[2026-02-08 11:46:08]  is_tar=False
[2026-02-08 11:46:08]  lfn=log.48318042._010679.job.log.tgz.1
[2026-02-08 11:46:08]  mtime=0
[2026-02-08 11:46:08]  protocol_id=None
[2026-02-08 11:46:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 11:46:08]  replicas=None
[2026-02-08 11:46:08]  scope=mc23_13p6TeV
[2026-02-08 11:46:08]  status=None
[2026-02-08 11:46:08]  status_code=0
[2026-02-08 11:46:08]  storage_token=
[2026-02-08 11:46:08]  surl=/var/lib/boinc-client/slots/8/PanDA_Pilot-7000487353/log.48318042._010679.job.log.tgz.1
[2026-02-08 11:46:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/75/log.48318042._010679.job.log.tgz.1
[2026-02-08 11:46:08]  workdir=None
[2026-02-08 11:46:08] ]
[2026-02-08 11:46:08] 2026-02-08 16:45:39,922 | INFO     | transferring file log.48318042._010679.job.log.tgz.1 from /var/lib/boinc-client/slots/8/PanDA_Pilot-7000487353/log.48318042._010679.job.log.tgz.1 to /var/lib/boinc
[2026-02-08 11:46:08] 2026-02-08 16:45:39,922 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/8/PanDA_Pilot-7000487353/log.48318042._010679.job.log.tgz.1 /var/lib/boinc-client/slots/8/log.483180
[2026-02-08 11:46:08] 2026-02-08 16:45:39,937 | INFO     | adding to output.list: log.48318042._010679.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/75/log.48318042._010679.job.log.tg
[2026-02-08 11:46:08] 2026-02-08 16:45:39,938 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 11:46:08] 2026-02-08 16:45:39,938 | INFO     | summary of transferred files:
[2026-02-08 11:46:08] 2026-02-08 16:45:39,938 | INFO     |  -- lfn=log.48318042._010679.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 11:46:08] 2026-02-08 16:45:39,938 | INFO     | stage-out finished correctly
[2026-02-08 11:46:08] 2026-02-08 16:45:40,817 | INFO     | time since job start (4426s) is within the limit (349056.0s)
[2026-02-08 11:46:08] 2026-02-08 16:45:41,199 | INFO     | monitor loop #334: job 0:7000487353 is in state 'finished'
[2026-02-08 11:46:08] 2026-02-08 16:45:41,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,247 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 11:46:08] 2026-02-08 16:45:42,328 | INFO     | job 7000487353 has state=finished
[2026-02-08 11:46:08] 2026-02-08 16:45:42,328 | INFO     | preparing for final server update for job 7000487353 in state='finished'
[2026-02-08 11:46:08] 2026-02-08 16:45:42,708 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,708 | INFO     | reading metadata from: /var/lib/boinc-client/slots/8/PanDA_Pilot-7000487353/jobReport.json
[2026-02-08 11:46:08] 2026-02-08 16:45:42,710 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/8/workernode_map.json
[2026-02-08 11:46:08] 2026-02-08 16:45:42,711 | INFO     | this job has now completed (state=finished)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,711 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,711 | INFO     | log transfer has been attempted: DONE
[2026-02-08 11:46:08] 2026-02-08 16:45:42,711 | INFO     | job 7000487353 has finished - writing final server update
[2026-02-08 11:46:08] 2026-02-08 16:45:42,711 | INFO     | total number of processed events: 400 (read)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,737 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-7000487353/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,738 | INFO     | extracted standard info from prmon json
[2026-02-08 11:46:08] 2026-02-08 16:45:42,738 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 11:46:08] 2026-02-08 16:45:42,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 11:46:08] 2026-02-08 16:45:42,738 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 11:46:08] 2026-02-08 16:45:42,738 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 11:46:08] 2026-02-08 16:45:42,740 | INFO     | fitting pss+swap vs Time
[2026-02-08 11:46:08] 2026-02-08 16:45:42,740 | INFO     | sum of square deviations: 89127252.5
[2026-02-08 11:46:08] 2026-02-08 16:45:42,740 | INFO     | sum of deviations: -7719943022.999999
[2026-02-08 11:46:08] 2026-02-08 16:45:42,741 | INFO     | mean x: 1770567021.5
[2026-02-08 11:46:08] 2026-02-08 16:45:42,741 | INFO     | mean y: 2825533.242424242
[2026-02-08 11:46:08] 2026-02-08 16:45:42,741 | INFO     | intersect: 153364184051.30978
[2026-02-08 11:46:08] 2026-02-08 16:45:42,741 | INFO     | chi2: 0.1317280466553303
[2026-02-08 11:46:08] 2026-02-08 16:45:42,741 | INFO     | current memory leak: -86.62 B/s (using 66 data points, chi2=0.13)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,741 | INFO     | could have reported an average CPU frequency of 2999 MHz (6 samples)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | ..............................
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . Timing measurements:
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . get job = 0 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . initial setup = 5 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . payload setup = 4 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . stage-in = 0 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . payload execution = 4404 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . stage-out = 0 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | . log creation = 0 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,742 | INFO     | ..............................
[2026-02-08 11:46:08] 2026-02-08 16:45:42,824 | INFO     | time since job start (4428s) is within the limit (349056.0s)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,844 | INFO     | 
[2026-02-08 11:46:08] 2026-02-08 16:45:42,844 | INFO     | job summary report
[2026-02-08 11:46:08] 2026-02-08 16:45:42,844 | INFO     | --------------------------------------------------
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | PanDA job id: 7000487353
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | task id: 48318042
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | errors: (none)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | pilot state: finished 
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | transexitcode: 0
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | exeerrorcode: 0
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | exeerrordiag: 
[2026-02-08 11:46:08] 2026-02-08 16:45:42,845 | INFO     | exitcode: 0
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | exitmsg: OK
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | cpuconsumptiontime: 46942 s
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | nevents: 400
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | neventsw: 0
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | pid: 1119613
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | pgrp: 1119613
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | corecount: 12
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | event service: False
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | sizes: {0: 2283113, 11: 2283113, 4412: 2309208, 4413: 2309207, 4414: 2318275, 4416: 2318331, 4417: 2318653}
[2026-02-08 11:46:08] 2026-02-08 16:45:42,846 | INFO     | --------------------------------------------------
[2026-02-08 11:46:08] 2026-02-08 16:45:42,847 | INFO     | 
[2026-02-08 11:46:08] 2026-02-08 16:45:42,847 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2026-02-08 11:46:08] 2026-02-08 16:45:42,866 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,866 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,866 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,866 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,867 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,868 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,868 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 11:46:08] 2026-02-08 16:45:42,868 | INFO     | job 7000487353 has completed (purged errors)
[2026-02-08 11:46:08] 2026-02-08 16:45:42,868 | INFO     | overall cleanup function is called
[2026-02-08 11:46:08] 2026-02-08 16:45:43,877 | INFO     | --- collectZombieJob: --- 10, [1119613]
[2026-02-08 11:46:08] 2026-02-08 16:45:43,877 | INFO     | zombie collector waiting for pid 1119613
[2026-02-08 11:46:08] 2026-02-08 16:45:43,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 11:46:08] 2026-02-08 16:45:43,877 | INFO     | collected zombie processes
[2026-02-08 11:46:08] 2026-02-08 16:45:43,877 | INFO     | will attempt to kill all subprocesses of pid=1119613
[2026-02-08 11:46:08] 2026-02-08 16:45:44,105 | INFO     | process IDs to be killed: [1119613] (in reverse order)
[2026-02-08 11:46:08] 2026-02-08 16:45:44,166 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 11:46:08] 2026-02-08 16:45:44,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 11:46:08] 2026-02-08 16:45:44,172 | INFO     | did not find any defunct processes belonging to 1119613
[2026-02-08 11:46:08] 2026-02-08 16:45:44,177 | INFO     | did not find any defunct processes belonging to 1119613
[2026-02-08 11:46:08] 2026-02-08 16:45:44,178 | INFO     | ready for new job
[2026-02-08 11:46:08] 2026-02-08 16:45:44,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 11:46:08] 2026-02-08 16:45:44,179 | INFO     | **************************************
[2026-02-08 11:46:08] 2026-02-08 16:45:44,179 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 11:46:08] 2026-02-08 16:45:44,180 | INFO     | **************************************
[2026-02-08 11:46:08] 2026-02-08 16:45:44,180 | INFO     | 
[2026-02-08 11:46:08] 2026-02-08 16:45:44,203 | INFO     | architecture information:
[2026-02-08 11:46:08] 2026-02-08 16:45:44,203 | INFO     | executing command: cat /etc/os-release
[2026-02-08 11:46:08] 2026-02-08 16:45:44,215 | INFO     | cat /etc/os-release:
[2026-02-08 11:46:08] NAME="CentOS Linux"
[2026-02-08 11:46:08] VERSION="7 (Core)"
[2026-02-08 11:46:08] ID="centos"
[2026-02-08 11:46:08] ID_LIKE="rhel fedora"
[2026-02-08 11:46:08] VERSION_ID="7"
[2026-02-08 11:46:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 11:46:08] ANSI_COLOR="0;31"
[2026-02-08 11:46:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 11:46:08] HOME_URL="https://www.centos.org/"
[2026-02-08 11:46:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 11:46:08] 
[2026-02-08 11:46:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 11:46:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 11:46:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 11:46:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 11:46:08] 
[2026-02-08 11:46:08] 2026-02-08 16:45:44,216 | INFO     | **************************************
[2026-02-08 11:46:08] 2026-02-08 16:45:44,719 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2026-02-08 11:46:08] 2026-02-08 16:45:44,732 | INFO     | sufficient remaining disk space (373007843328 B)
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | INFO     | update_server=False
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 11:46:08] 2026-02-08 16:45:44,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 11:46:08] 2026-02-08 16:45:44,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 11:46:08] 2026-02-08 16:45:44,734 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 11:46:08] 2026-02-08 16:45:44,734 | INFO     | aborting loop
[2026-02-08 11:46:08] 2026-02-08 16:45:44,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 11:46:08] 2026-02-08 16:45:44,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 11:46:08] 2026-02-08 16:45:45,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 11:46:08] 2026-02-08 16:45:45,544 | INFO     | all payload control threads have been joined
[2026-02-08 11:46:08] 2026-02-08 16:45:45,592 | INFO     | all data control threads have been joined
[2026-02-08 11:46:08] 2026-02-08 16:45:45,736 | INFO     | [job] retrieve thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:45,736 | INFO     | [job] queue monitor thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:45,740 | INFO     | [job] job monitor thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:45,805 | INFO     | [payload] failed_post thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:46,044 | INFO     | [data] copytool_in thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:46,332 | INFO     | [payload] validate_post thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:46,356 | INFO     | all job control threads have been joined
[2026-02-08 11:46:08] 2026-02-08 16:45:46,548 | INFO     | [payload] control thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:46,596 | INFO     | [data] control thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:46,920 | INFO     | [job] validate thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:47,016 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:47,112 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:47,164 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:47,360 | INFO     | [job] control thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:47,516 | INFO     | [data] copytool_out thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:48,736 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:45:55,292 | INFO     | job.realtimelogging is not enabled
[2026-02-08 11:46:08] 2026-02-08 16:45:56,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 11:46:08] 2026-02-08 16:46:01,364 | INFO     | [monitor] cgroup control has ended
[2026-02-08 11:46:08] 2026-02-08 16:46:02,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140051394000704)>', '<ExcThread(monitor, started 140050830456576)>']
[2026-02-08 11:46:08] 2026-02-08 16:46:03,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 11:46:08] 2026-02-08 16:46:03,808 | INFO     | [monitor] control thread has ended
[2026-02-08 11:46:08] 2026-02-08 16:46:07,925 | INFO     | all workflow threads have been joined
[2026-02-08 11:46:08] 2026-02-08 16:46:07,926 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 11:46:08] 2026-02-08 16:46:07,926 | INFO     | traces error code: 0
[2026-02-08 11:46:08] 2026-02-08 16:46:07,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 11:46:08] 2026-02-08 16:46:08,073 [wrapper] ==== pilot stdout END ====
[2026-02-08 11:46:08] 2026-02-08 16:46:08,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 11:46:08] 2026-02-08 16:46:08,077 [wrapper] pilotpid: 1114786
[2026-02-08 11:46:08] 2026-02-08 16:46:08,079 [wrapper] Pilot exit status: 0
[2026-02-08 11:46:08] 2026-02-08 16:46:08,086 [wrapper] pandaids: 7000487353
[2026-02-08 11:46:08] 2026-02-08 16:46:08,126 [wrapper] cleanup supervisor_pilot 1149923 1114787
[2026-02-08 11:46:08] 2026-02-08 16:46:08,130 [wrapper] Test setup, not cleaning
[2026-02-08 11:46:08] 2026-02-08 16:46:08,132 [wrapper] apfmon messages muted
[2026-02-08 11:46:08] 2026-02-08 16:46:08,134 [wrapper] ==== wrapper stdout END ====
[2026-02-08 11:46:08] 2026-02-08 16:46:08,137 [wrapper] ==== wrapper stderr END ====
[2026-02-08 11:46:08]  *** Error codes and diagnostics ***
[2026-02-08 11:46:08]     "exeErrorCode": 0,
[2026-02-08 11:46:08]     "exeErrorDiag": "",
[2026-02-08 11:46:08]     "pilotErrorCode": 0,
[2026-02-08 11:46:08]     "pilotErrorDiag": "",
[2026-02-08 11:46:08]  *** Listing of results directory ***
[2026-02-08 11:46:08] total 685480
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc    584627 Feb  7 04:20 pilot3.tar.gz
[2026-02-08 11:46:08] -rwx------ 1 boinc boinc     36322 Feb  7 04:21 runpilot2-wrapper.sh
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc      5111 Feb  7 04:24 queuedata.json
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc       100 Feb  8 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 11:46:08] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 10:31 run_atlas
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc       105 Feb  8 10:31 job.xml
[2026-02-08 11:46:08] -rw-r--r-- 2 boinc boinc     15845 Feb  8 10:31 start_atlas.sh
[2026-02-08 11:46:08] drwxrwx--x 2 boinc boinc      4096 Feb  8 10:31 shared
[2026-02-08 11:46:08] -rw-r--r-- 2 boinc boinc    597957 Feb  8 10:31 input.tar.gz
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc      7579 Feb  8 10:31 init_data.xml
[2026-02-08 11:46:08] -rw-r--r-- 2 boinc boinc 504911766 Feb  8 10:31 EVNT.48318040._000204.pool.root.1
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc         0 Feb  8 10:31 boinc_lockfile
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc      2538 Feb  8 10:31 pandaJob.out
[2026-02-08 11:46:08] -rw------- 1 boinc boinc        50 Feb  8 10:31 setup.sh.local
[2026-02-08 11:46:08] -rw------- 1 boinc boinc   1009488 Feb  8 10:31 agis_schedconf.cvmfs.json
[2026-02-08 11:46:08] -rw------- 1 boinc boinc   1513088 Feb  8 10:31 agis_ddmendpoints.agis.ALL.json
[2026-02-08 11:46:08] -rw------- 1 boinc boinc       429 Feb  8 10:31 workernode_map.json
[2026-02-08 11:46:08] drwx------ 5 boinc boinc      4096 Feb  8 10:31 pilot3
[2026-02-08 11:46:08] -rw------- 1 boinc boinc        95 Feb  8 11:44 pilot_heartbeat.json
[2026-02-08 11:46:08] -rw------- 1 boinc boinc 190894534 Feb  8 11:45 HITS.48318042._010679.pool.root.1
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc       530 Feb  8 11:45 boinc_task_state.xml
[2026-02-08 11:46:08] -rw------- 1 boinc boinc      1027 Feb  8 11:45 memory_monitor_summary.json
[2026-02-08 11:46:08] -rw------- 1 boinc boinc    423078 Feb  8 11:45 log.48318042._010679.job.log.tgz.1
[2026-02-08 11:46:08] -rw------- 1 boinc boinc      6339 Feb  8 11:45 heartbeat.json
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc      8192 Feb  8 11:46 boinc_mmap_file
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc        27 Feb  8 11:46 wrapper_checkpoint.txt
[2026-02-08 11:46:08] -rw------- 1 boinc boinc      4628 Feb  8 11:46 pilotlog.txt
[2026-02-08 11:46:08] -rw------- 1 boinc boinc    663687 Feb  8 11:46 log.48318042._010679.job.log.1
[2026-02-08 11:46:08] -rw------- 1 boinc boinc       357 Feb  8 11:46 output.list
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc       620 Feb  8 11:46 runtime_log
[2026-02-08 11:46:08] -rw------- 1 boinc boinc   1105920 Feb  8 11:46 result.tar.gz
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc      9403 Feb  8 11:46 runtime_log.err
[2026-02-08 11:46:08] -rw------- 1 boinc boinc       651 Feb  8 11:46 jp6LDmwgt88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6zaKDmalLsRm.diag
[2026-02-08 11:46:08] -rw-r--r-- 1 boinc boinc     20975 Feb  8 11:46 stderr.txt
[2026-02-08 11:46:08] HITS file was successfully produced:
[2026-02-08 11:46:08] -rw------- 1 boinc boinc 190894534 Feb  8 11:45 shared/HITS.pool.root.1
[2026-02-08 11:46:08]  *** Contents of shared directory: ***
[2026-02-08 11:46:08] total 681192
[2026-02-08 11:46:08] -rw-r--r-- 2 boinc boinc     15845 Feb  8 10:31 start_atlas.sh
[2026-02-08 11:46:08] -rw-r--r-- 2 boinc boinc    597957 Feb  8 10:31 input.tar.gz
[2026-02-08 11:46:08] -rw-r--r-- 2 boinc boinc 504911766 Feb  8 10:31 ATLAS.root_0
[2026-02-08 11:46:08] -rw------- 1 boinc boinc 190894534 Feb  8 11:45 HITS.pool.root.1
[2026-02-08 11:46:08] -rw------- 1 boinc boinc   1105920 Feb  8 11:46 result.tar.gz
11:46:10 (1110403): run_atlas exited; CPU time 47016.155191
11:46:10 (1110403): called boinc_finish(0)

</stderr_txt>
]]>

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