Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:47:15 (15747): wrapper (7.7.26015): starting
09:47:15 (15747): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 09:47:15] Arguments: --nthreads 12
[2026-02-07 09:47:15] Threads: 12
[2026-02-07 09:47:15] Checking for CVMFS
[2026-02-07 09:47:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 09:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 09:47:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 09:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 09:47:16] 2.11.2.0 3035 392895 99716 155986 3 50 18149549 20275200 1 130560 3 168077171 99.949 24080150 17194 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 09:47:16] CVMFS is ok
[2026-02-07 09:47:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 09:47:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 09:47:16] Further information can be found at the LHC@home message board.
[2026-02-07 09:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 09:47:16] Checking for apptainer binary...
[2026-02-07 09:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 09:47:16] Running /usr/bin/apptainer --version
[2026-02-07 09:47:16] apptainer version 1.3.2-1.el7
[2026-02-07 09:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 09:47:18] c-205-31.aglt2.org
[2026-02-07 09:47:18] apptainer works
[2026-02-07 09:47:18] Set ATHENA_PROC_NUMBER=12
[2026-02-07 09:47:18] Set ATHENA_CORE_NUMBER=12
[2026-02-07 09:47:18] Starting ATLAS job with PandaID=7000488771
[2026-02-07 09:47:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 11:01:58]  *** The last 200 lines of the pilot log: ***
[2026-02-07 11:01:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 11:01:58]  replicas=None
[2026-02-07 11:01:58]  scope=mc23_13p6TeV
[2026-02-07 11:01:58]  status=None
[2026-02-07 11:01:58]  status_code=0
[2026-02-07 11:01:58]  storage_token=
[2026-02-07 11:01:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7000488771/log.48318034._011390.job.log.tgz.1
[2026-02-07 11:01:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/86/log.48318034._011390.job.log.tgz.1
[2026-02-07 11:01:58]  workdir=None
[2026-02-07 11:01:58] ]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,250 | INFO     | transferring file log.48318034._011390.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7000488771/log.48318034._011390.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 11:01:58] 2026-02-07 16:01:25,250 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7000488771/log.48318034._011390.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318034._011390.job
[2026-02-07 11:01:58] 2026-02-07 16:01:25,271 | INFO     | adding to output.list: log.48318034._011390.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/91/86/log.48318034._011390.job.log.tg
[2026-02-07 11:01:58] 2026-02-07 16:01:25,272 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 11:01:58] 2026-02-07 16:01:25,272 | INFO     | summary of transferred files:
[2026-02-07 11:01:58] 2026-02-07 16:01:25,272 | INFO     |  -- lfn=log.48318034._011390.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 11:01:58] 2026-02-07 16:01:25,273 | INFO     | stage-out finished correctly
[2026-02-07 11:01:58] 2026-02-07 16:01:25,356 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 11:01:58] 2026-02-07 16:01:25,535 | INFO     | job 7000488771 has state=finished
[2026-02-07 11:01:58] 2026-02-07 16:01:25,535 | INFO     | preparing for final server update for job 7000488771 in state='finished'
[2026-02-07 11:01:58] 2026-02-07 16:01:25,535 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7000488771/jobReport.json
[2026-02-07 11:01:58] 2026-02-07 16:01:25,538 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 11:01:58] 2026-02-07 16:01:25,539 | INFO     | this job has now completed (state=finished)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,539 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,539 | INFO     | log transfer has been attempted: DONE
[2026-02-07 11:01:58] 2026-02-07 16:01:25,539 | INFO     | job 7000488771 has finished - writing final server update
[2026-02-07 11:01:58] 2026-02-07 16:01:25,540 | INFO     | total number of processed events: 400 (read)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,542 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7000488771/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,543 | INFO     | extracted standard info from prmon json
[2026-02-07 11:01:58] 2026-02-07 16:01:25,543 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:01:58] 2026-02-07 16:01:25,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:01:58] 2026-02-07 16:01:25,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:01:58] 2026-02-07 16:01:25,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:01:58] 2026-02-07 16:01:25,545 | INFO     | fitting pss+swap vs Time
[2026-02-07 11:01:58] 2026-02-07 16:01:25,546 | INFO     | sum of square deviations: 89127252.5
[2026-02-07 11:01:58] 2026-02-07 16:01:25,546 | INFO     | sum of deviations: -2893312228.0
[2026-02-07 11:01:58] 2026-02-07 16:01:25,546 | INFO     | mean x: 1770477970.5
[2026-02-07 11:01:58] 2026-02-07 16:01:25,546 | INFO     | mean y: 2711664.090909091
[2026-02-07 11:01:58] 2026-02-07 16:01:25,546 | INFO     | intersect: 57477226111.3109
[2026-02-07 11:01:58] 2026-02-07 16:01:25,546 | INFO     | chi2: 0.09165110196919071
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | current memory leak: -32.46 B/s (using 66 data points, chi2=0.09)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | ..............................
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | . Timing measurements:
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | . get job = 0 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | . initial setup = 7 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | . payload setup = 7 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,547 | INFO     | . stage-in = 0 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,548 | INFO     | . payload execution = 4402 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,548 | INFO     | . stage-out = 0 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,548 | INFO     | . log creation = 0 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,548 | INFO     | ..............................
[2026-02-07 11:01:58] 2026-02-07 16:01:25,624 | INFO     | 
[2026-02-07 11:01:58] 2026-02-07 16:01:25,624 | INFO     | job summary report
[2026-02-07 11:01:58] 2026-02-07 16:01:25,624 | INFO     | --------------------------------------------------
[2026-02-07 11:01:58] 2026-02-07 16:01:25,624 | INFO     | PanDA job id: 7000488771
[2026-02-07 11:01:58] 2026-02-07 16:01:25,625 | INFO     | task id: 48318034
[2026-02-07 11:01:58] 2026-02-07 16:01:25,625 | INFO     | errors: (none)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,625 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 11:01:58] 2026-02-07 16:01:25,625 | INFO     | pilot state: finished 
[2026-02-07 11:01:58] 2026-02-07 16:01:25,625 | INFO     | transexitcode: 0
[2026-02-07 11:01:58] 2026-02-07 16:01:25,625 | INFO     | exeerrorcode: 0
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | exeerrordiag: 
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | exitcode: 0
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | exitmsg: OK
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | cpuconsumptiontime: 46522 s
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | nevents: 400
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | neventsw: 0
[2026-02-07 11:01:58] 2026-02-07 16:01:25,626 | INFO     | pid: 24113
[2026-02-07 11:01:58] 2026-02-07 16:01:25,627 | INFO     | pgrp: 24113
[2026-02-07 11:01:58] 2026-02-07 16:01:25,627 | INFO     | corecount: 12
[2026-02-07 11:01:58] 2026-02-07 16:01:25,627 | INFO     | event service: False
[2026-02-07 11:01:58] 2026-02-07 16:01:25,627 | INFO     | sizes: {0: 2282623, 1: 2283084, 12: 2283084, 4412: 2309160, 4414: 2318158, 4415: 2318536}
[2026-02-07 11:01:58] 2026-02-07 16:01:25,627 | INFO     | --------------------------------------------------
[2026-02-07 11:01:58] 2026-02-07 16:01:25,627 | INFO     | 
[2026-02-07 11:01:58] 2026-02-07 16:01:25,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 11:01:58] 2026-02-07 16:01:25,650 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,650 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,650 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,650 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,651 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,653 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 11:01:58] 2026-02-07 16:01:25,653 | INFO     | job 7000488771 has completed (purged errors)
[2026-02-07 11:01:58] 2026-02-07 16:01:25,653 | INFO     | overall cleanup function is called
[2026-02-07 11:01:58] 2026-02-07 16:01:26,661 | INFO     | --- collectZombieJob: --- 10, [24113]
[2026-02-07 11:01:58] 2026-02-07 16:01:26,661 | INFO     | zombie collector waiting for pid 24113
[2026-02-07 11:01:58] 2026-02-07 16:01:26,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 11:01:58] 2026-02-07 16:01:26,662 | INFO     | collected zombie processes
[2026-02-07 11:01:58] 2026-02-07 16:01:26,662 | INFO     | will attempt to kill all subprocesses of pid=24113
[2026-02-07 11:01:58] 2026-02-07 16:01:26,755 | INFO     | process IDs to be killed: [24113] (in reverse order)
[2026-02-07 11:01:58] 2026-02-07 16:01:26,810 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 11:01:58] 2026-02-07 16:01:26,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 11:01:58] 2026-02-07 16:01:26,814 | INFO     | did not find any defunct processes belonging to 24113
[2026-02-07 11:01:58] 2026-02-07 16:01:26,816 | INFO     | did not find any defunct processes belonging to 24113
[2026-02-07 11:01:58] 2026-02-07 16:01:26,817 | INFO     | ready for new job
[2026-02-07 11:01:58] 2026-02-07 16:01:26,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 11:01:58] 2026-02-07 16:01:26,818 | INFO     | **************************************
[2026-02-07 11:01:58] 2026-02-07 16:01:26,818 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 11:01:58] 2026-02-07 16:01:26,818 | INFO     | **************************************
[2026-02-07 11:01:58] 2026-02-07 16:01:26,818 | INFO     | 
[2026-02-07 11:01:58] 2026-02-07 16:01:26,819 | INFO     | architecture information:
[2026-02-07 11:01:58] 2026-02-07 16:01:26,819 | INFO     | executing command: cat /etc/os-release
[2026-02-07 11:01:58] 2026-02-07 16:01:26,834 | INFO     | cat /etc/os-release:
[2026-02-07 11:01:58] NAME="CentOS Linux"
[2026-02-07 11:01:58] VERSION="7 (Core)"
[2026-02-07 11:01:58] ID="centos"
[2026-02-07 11:01:58] ID_LIKE="rhel fedora"
[2026-02-07 11:01:58] VERSION_ID="7"
[2026-02-07 11:01:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 11:01:58] ANSI_COLOR="0;31"
[2026-02-07 11:01:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 11:01:58] HOME_URL="https://www.centos.org/"
[2026-02-07 11:01:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 11:01:58] 
[2026-02-07 11:01:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 11:01:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 11:01:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 11:01:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 11:01:58] 
[2026-02-07 11:01:58] 2026-02-07 16:01:26,835 | INFO     | **************************************
[2026-02-07 11:01:58] 2026-02-07 16:01:26,960 | WARNING  | process 24113 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 11:01:58] 2026-02-07 16:01:27,035 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:01:58] 2026-02-07 16:01:27,036 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:01:58] 2026-02-07 16:01:27,036 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-07 11:01:58] 2026-02-07 16:01:27,036 | WARNING  | maxPSS not found in memory monitor output
[2026-02-07 11:01:58] 2026-02-07 16:01:27,037 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7000488771/payload.stdout) since it has not been created yet
[2026-02-07 11:01:58] 2026-02-07 16:01:27,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 11:01:58] 2026-02-07 16:01:27,053 | INFO     | sufficient remaining disk space (28784459776 B)
[2026-02-07 11:01:58] 2026-02-07 16:01:27,053 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-07 11:01:58] 2026-02-07 16:01:27,053 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7000488771/HITS.48318034._011390.pool.root.1 since it does not exist
[2026-02-07 11:01:58] 2026-02-07 16:01:27,146 | INFO     | number of running child processes to parent process 24113: 1
[2026-02-07 11:01:58] 2026-02-07 16:01:27,146 | INFO     | maximum number of monitored processes: 6
[2026-02-07 11:01:58] 2026-02-07 16:01:27,146 | INFO     | aborting job monitoring since job object (job id=7000488771) has expired
[2026-02-07 11:01:58] 2026-02-07 16:01:27,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 11:01:58] 2026-02-07 16:01:27,355 | INFO     | sufficient remaining disk space (28784459776 B)
[2026-02-07 11:01:58] 2026-02-07 16:01:27,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 11:01:58] 2026-02-07 16:01:27,355 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 11:01:58] 2026-02-07 16:01:27,355 | INFO     | update_server=False
[2026-02-07 11:01:58] 2026-02-07 16:01:27,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 11:01:58] 2026-02-07 16:01:27,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:01:58] 2026-02-07 16:01:27,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:01:58] 2026-02-07 16:01:27,356 | INFO     | will abort loop
[2026-02-07 11:01:58] 2026-02-07 16:01:27,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 11:01:58] 2026-02-07 16:01:27,618 | INFO     | all payload control threads have been joined
[2026-02-07 11:01:58] 2026-02-07 16:01:27,695 | INFO     | all data control threads have been joined
[2026-02-07 11:01:58] 2026-02-07 16:01:28,223 | INFO     | job.realtimelogging is not enabled
[2026-02-07 11:01:58] 2026-02-07 16:01:28,357 | INFO     | [job] retrieve thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 11:01:58] 2026-02-07 16:01:28,362 | INFO     | [job] queue monitor thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,363 | INFO     | [job] job monitor thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,424 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,437 | INFO     | all job control threads have been joined
[2026-02-07 11:01:58] 2026-02-07 16:01:28,624 | INFO     | [payload] control thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,647 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,653 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,700 | INFO     | [data] control thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:28,850 | INFO     | [data] copytool_in thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:29,028 | INFO     | [payload] validate_post thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:29,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:29,282 | INFO     | [payload] failed_post thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:29,442 | INFO     | [job] control thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:29,700 | INFO     | [job] validate thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:30,367 | INFO     | [data] copytool_out thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:31,363 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 11:01:58] 2026-02-07 16:01:45,518 | INFO     | [monitor] cgroup control has ended
[2026-02-07 11:01:58] 2026-02-07 16:01:47,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839738500928)>', '<ExcThread(monitor, started 139838481225472)>']
[2026-02-07 11:01:58] 2026-02-07 16:01:52,284 | INFO     | all workflow threads have been joined
[2026-02-07 11:01:58] 2026-02-07 16:01:52,284 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 11:01:58] 2026-02-07 16:01:52,285 | INFO     | traces error code: 0
[2026-02-07 11:01:58] 2026-02-07 16:01:52,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 11:01:58] 2026-02-07 16:01:58,197 | INFO     | PID=19713 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 11:01:58] 2026-02-07 16:01:58,199 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 11:01:58] 2026-02-07 16:01:58,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 11:01:58] 2026-02-07 16:01:58,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 11:01:58] 2026-02-07 16:01:58,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 11:01:58] 2026-02-07 16:01:58,199 | INFO     | [monitor] control thread has ended
[2026-02-07 11:01:58] 2026-02-07 16:01:58,287 [wrapper] ==== pilot stdout END ====
[2026-02-07 11:01:58] 2026-02-07 16:01:58,291 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 11:01:58] 2026-02-07 16:01:58,295 [wrapper] pilotpid: 19713
[2026-02-07 11:01:58] 2026-02-07 16:01:58,299 [wrapper] Pilot exit status: 0
[2026-02-07 11:01:58] 2026-02-07 16:01:58,315 [wrapper] pandaids: 7000488771
[2026-02-07 11:01:58] 2026-02-07 16:01:58,356 [wrapper] cleanup supervisor_pilot 12636 19714
[2026-02-07 11:01:58] 2026-02-07 16:01:58,360 [wrapper] Test setup, not cleaning
[2026-02-07 11:01:58] 2026-02-07 16:01:58,364 [wrapper] apfmon messages muted
[2026-02-07 11:01:58] 2026-02-07 16:01:58,368 [wrapper] ==== wrapper stdout END ====
[2026-02-07 11:01:58] 2026-02-07 16:01:58,372 [wrapper] ==== wrapper stderr END ====
[2026-02-07 11:01:58]  *** Error codes and diagnostics ***
[2026-02-07 11:01:58]     "exeErrorCode": 0,
[2026-02-07 11:01:58]     "exeErrorDiag": "",
[2026-02-07 11:01:58]     "pilotErrorCode": 0,
[2026-02-07 11:01:58]     "pilotErrorDiag": "",
[2026-02-07 11:01:58]  *** Listing of results directory ***
[2026-02-07 11:01:58] total 674964
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 04:20 pilot3.tar.gz
[2026-02-07 11:01:58] -rwx------ 1 boincer umatlas     36322 Feb  7 04:21 runpilot2-wrapper.sh
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 04:24 queuedata.json
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas       100 Feb  7 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 11:01:58] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 09:47 run_atlas
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas       105 Feb  7 09:47 job.xml
[2026-02-07 11:01:58] -rw-r--r-- 2 boincer umatlas 503537909 Feb  7 09:47 EVNT.48318032._000216.pool.root.1
[2026-02-07 11:01:58] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 09:47 start_atlas.sh
[2026-02-07 11:01:58] drwxrwx--x 2 boincer umatlas      4096 Feb  7 09:47 shared
[2026-02-07 11:01:58] -rw-r--r-- 2 boincer umatlas    597955 Feb  7 09:47 input.tar.gz
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas         0 Feb  7 09:47 boinc_lockfile
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas      2538 Feb  7 09:47 pandaJob.out
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas        57 Feb  7 09:47 setup.sh.local
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas   1009502 Feb  7 09:47 agis_schedconf.cvmfs.json
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas   1513088 Feb  7 09:47 agis_ddmendpoints.agis.ALL.json
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas       445 Feb  7 09:47 workernode_map.json
[2026-02-07 11:01:58] drwx------ 5 boincer umatlas      4096 Feb  7 09:47 pilot3
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas 181569702 Feb  7 11:00 HITS.48318034._011390.pool.root.1
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas       530 Feb  7 11:01 boinc_task_state.xml
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas      1045 Feb  7 11:01 memory_monitor_summary.json
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas    408612 Feb  7 11:01 log.48318034._011390.job.log.tgz.1
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas      6417 Feb  7 11:01 heartbeat.json
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas      5953 Feb  7 11:01 init_data.xml
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 11:01 boinc_mmap_file
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas        27 Feb  7 11:01 wrapper_checkpoint.txt
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas        95 Feb  7 11:01 pilot_heartbeat.json
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas       745 Feb  7 11:01 pilotlog.txt
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas    645677 Feb  7 11:01 log.48318034._011390.job.log.1
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas       357 Feb  7 11:01 output.list
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas       620 Feb  7 11:01 runtime_log
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas   1075200 Feb  7 11:01 result.tar.gz
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas      9343 Feb  7 11:01 runtime_log.err
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas       659 Feb  7 11:01 B2FLDmwgt88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrzaKDmX6n1Po.diag
[2026-02-07 11:01:58] -rw-r--r-- 1 boincer umatlas     22020 Feb  7 11:01 stderr.txt
[2026-02-07 11:01:58] HITS file was successfully produced:
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas 181569702 Feb  7 11:00 shared/HITS.pool.root.1
[2026-02-07 11:01:58]  *** Contents of shared directory: ***
[2026-02-07 11:01:58] total 670716
[2026-02-07 11:01:58] -rw-r--r-- 2 boincer umatlas 503537909 Feb  7 09:47 ATLAS.root_0
[2026-02-07 11:01:58] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 09:47 start_atlas.sh
[2026-02-07 11:01:58] -rw-r--r-- 2 boincer umatlas    597955 Feb  7 09:47 input.tar.gz
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas 181569702 Feb  7 11:00 HITS.pool.root.1
[2026-02-07 11:01:58] -rw------- 1 boincer umatlas   1075200 Feb  7 11:01 result.tar.gz
11:01:59 (15747): run_atlas exited; CPU time 46496.969682
11:01:59 (15747): called boinc_finish(0)

</stderr_txt>
]]>

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