Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:42:19 (3552045): wrapper (7.7.26015): starting
11:42:19 (3552045): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 11:42:19] Arguments: --nthreads 12
[2026-02-07 11:42:19] Threads: 12
[2026-02-07 11:42:19] Checking for CVMFS
[2026-02-07 11:42:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 11:42:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 11:42:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 11:42:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 11:42:23] 2.11.5.0 3306151 98766 353980 155994 1 595 43184466 45568000 27827 130560 0 537999712 99.799 341563592 21938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-07 11:42:23] CVMFS is ok
[2026-02-07 11:42:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 11:42:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 11:42:23] Further information can be found at the LHC@home message board.
[2026-02-07 11:42:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 11:42:23] Checking for apptainer binary...
[2026-02-07 11:42:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 11:42:23] Running /usr/bin/apptainer --version
[2026-02-07 11:42:23] apptainer version 1.4.1-1.el9
[2026-02-07 11:42:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 11:42:25] wns0041.triumf.lcg
[2026-02-07 11:42:25] apptainer works
[2026-02-07 11:42:25] Set ATHENA_PROC_NUMBER=12
[2026-02-07 11:42:25] Set ATHENA_CORE_NUMBER=12
[2026-02-07 11:42:25] Starting ATLAS job with PandaID=7000833415
[2026-02-07 11:42:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 11:50:18]  *** The last 200 lines of the pilot log: ***
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:50:18] 2026-02-07 19:49:16,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:50:18] 2026-02-07 19:49:16,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:50:18] 2026-02-07 19:49:16,864 | WARNING  | wrong length of table data, x=[1770493546.0, 1770493607.0], y=[1457.0, 493701.0] (must be same and length>=4)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,864 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | ..............................
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . Timing measurements:
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . get job = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . initial setup = 37 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . payload setup = 44 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . stage-in = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . payload execution = 121 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . stage-out = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . log creation = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | ..............................
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000833415/pilotlog.txt
[2026-02-07 11:50:18] 2026-02-07 19:49:17,018 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 11:50:18] - Log from pilotlog.txt -
[2026-02-07 11:50:18] 2026-02-07 19:49:16,857 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000833415/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | INFO     | extracted standard info from prmon json
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:50:18] 2026-02-07 19:49:16,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:50:18] 2026-02-07 19:49:16,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:50:18] 2026-02-07 19:49:16,864 | WARNING  | wrong length of table data, x=[1770493546.0, 1770493607.0], y=[1457.0, 493701.0] (must be same and length>=4)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,864 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | ..............................
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . Timing measurements:
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . get job = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . initial setup = 37 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . payload setup = 44 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . stage-in = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . payload execution = 121 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . stage-out = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . log creation = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | ..............................
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000833415/pilotlog.txt
[2026-02-07 11:50:18] 2026-02-07 19:49:17,019 | WARNING  | 
[2026-02-07 11:50:18] [begin log extracts]
[2026-02-07 11:50:18] - Log from pilotlog.txt -
[2026-02-07 11:50:18] 2026-02-07 19:49:16,857 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000833415/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | INFO     | extracted standard info from prmon json
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:50:18] 2026-02-07 19:49:16,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:50:18] 2026-02-07 19:49:16,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:50:18] 2026-02-07 19:49:16,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:50:18] 2026-02-07 19:49:16,864 | WARNING  | wrong length of table data, x=[1770493546.0, 1770493607.0], y=[1457.0, 493701.0] (must be same and length>=4)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,864 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | ..............................
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . Timing measurements:
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . get job = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . initial setup = 37 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . payload setup = 44 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . stage-in = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . payload execution = 121 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . stage-out = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,865 | INFO     | . log creation = 0 s
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | ..............................
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 11:50:18] 2026-02-07 19:49:16,866 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000833415/pilotlog.txt
[2026-02-07 11:50:18] [end log extracts]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,019 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 11:50:18] 2026-02-07 19:49:17,021 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 11:50:18] 2026-02-07 19:49:17,695 | INFO     | 
[2026-02-07 11:50:18] 2026-02-07 19:49:17,695 | INFO     | job summary report
[2026-02-07 11:50:18] 2026-02-07 19:49:17,695 | INFO     | --------------------------------------------------
[2026-02-07 11:50:18] 2026-02-07 19:49:17,695 | INFO     | PanDA job id: 7000833415
[2026-02-07 11:50:18] 2026-02-07 19:49:17,695 | INFO     | task id: 48442098
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 11:47:03,252 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | pilot state: failed 
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | transexitcode: 65
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | exeerrorcode: 65
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | exitcode: 65
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | cpuconsumptiontime: 24 s
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | nevents: 0
[2026-02-07 11:50:18] 2026-02-07 19:49:17,696 | INFO     | neventsw: 0
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | pid: 3569618
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | pgrp: 3569618
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | corecount: 12
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | event service: False
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | sizes: {0: 2282601, 1: 2282685, 2: 2283146, 13: 2283146, 170: 2306428, 172: 2310720, 174: 2310876, 293: 2311042}
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | --------------------------------------------------
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | 
[2026-02-07 11:50:18] 2026-02-07 19:49:17,697 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 11:50:18] 2026-02-07 19:49:17,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,908 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 11:50:18] 2026-02-07 19:49:17,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,909 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 11:50:18] 2026-02-07 19:49:17,909 | INFO     | job 7000833415 has completed (purged errors)
[2026-02-07 11:50:18] 2026-02-07 19:49:17,909 | INFO     | overall cleanup function is called
[2026-02-07 11:50:18] 2026-02-07 19:49:18,938 | INFO     | --- collectZombieJob: --- 10, [3569618]
[2026-02-07 11:50:18] 2026-02-07 19:49:18,938 | INFO     | zombie collector waiting for pid 3569618
[2026-02-07 11:50:18] 2026-02-07 19:49:18,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 11:50:18] 2026-02-07 19:49:18,938 | INFO     | collected zombie processes
[2026-02-07 11:50:18] 2026-02-07 19:49:18,939 | INFO     | will attempt to kill all subprocesses of pid=3569618
[2026-02-07 11:50:18] 2026-02-07 19:49:20,424 | INFO     | process IDs to be killed: [3569618] (in reverse order)
[2026-02-07 11:50:18] 2026-02-07 19:49:20,732 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 11:50:18] 2026-02-07 19:49:20,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 11:50:18] 2026-02-07 19:49:20,782 | INFO     | did not find any defunct processes belonging to 3569618
[2026-02-07 11:50:18] 2026-02-07 19:49:20,830 | INFO     | did not find any defunct processes belonging to 3569618
[2026-02-07 11:50:18] 2026-02-07 19:49:20,830 | INFO     | ready for new job
[2026-02-07 11:50:18] 2026-02-07 19:49:20,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 11:50:18] 2026-02-07 19:49:20,833 | INFO     | **************************************
[2026-02-07 11:50:18] 2026-02-07 19:49:20,833 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 11:50:18] 2026-02-07 19:49:20,833 | INFO     | **************************************
[2026-02-07 11:50:18] 2026-02-07 19:49:20,833 | INFO     | 
[2026-02-07 11:50:18] 2026-02-07 19:49:20,844 | INFO     | architecture information:
[2026-02-07 11:50:18] 2026-02-07 19:49:20,849 | INFO     | executing command: cat /etc/os-release
[2026-02-07 11:50:18] 2026-02-07 19:49:20,901 | INFO     | cat /etc/os-release:
[2026-02-07 11:50:18] NAME="CentOS Linux"
[2026-02-07 11:50:18] VERSION="7 (Core)"
[2026-02-07 11:50:18] ID="centos"
[2026-02-07 11:50:18] ID_LIKE="rhel fedora"
[2026-02-07 11:50:18] VERSION_ID="7"
[2026-02-07 11:50:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 11:50:18] ANSI_COLOR="0;31"
[2026-02-07 11:50:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 11:50:18] HOME_URL="https://www.centos.org/"
[2026-02-07 11:50:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 11:50:18] 
[2026-02-07 11:50:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 11:50:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 11:50:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 11:50:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 11:50:18] 
[2026-02-07 11:50:18] 2026-02-07 19:49:20,902 | INFO     | **************************************
[2026-02-07 11:50:18] 2026-02-07 19:49:21,410 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 11:50:18] 2026-02-07 19:49:21,475 | INFO     | sufficient remaining disk space (2131448823808 B)
[2026-02-07 11:50:18] 2026-02-07 19:49:21,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 11:50:18] 2026-02-07 19:49:21,476 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 11:50:18] 2026-02-07 19:49:21,476 | INFO     | update_server=False
[2026-02-07 11:50:18] 2026-02-07 19:49:21,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 11:50:18] 2026-02-07 19:49:21,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:50:18] 2026-02-07 19:49:21,477 | INFO     | aborting loop
[2026-02-07 11:50:18] 2026-02-07 19:49:21,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 11:50:18] 2026-02-07 19:49:21,614 | INFO     | all data control threads have been joined
[2026-02-07 11:50:18] 2026-02-07 19:49:21,732 | INFO     | all job control threads have been joined
[2026-02-07 11:50:18] 2026-02-07 19:49:21,834 | INFO     | all payload control threads have been joined
[2026-02-07 11:50:18] 2026-02-07 19:49:22,482 | INFO     | [job] retrieve thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,487 | INFO     | [job] job monitor thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,620 | INFO     | [data] control thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,634 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:50:18] 2026-02-07 19:49:22,739 | INFO     | [job] control thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,818 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,840 | INFO     | [payload] control thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:22,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 11:50:18] 2026-02-07 19:49:23,229 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:23,233 | INFO     | [job] validate thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:23,486 | INFO     | [data] copytool_out thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:23,554 | INFO     | [payload] failed_post thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:23,674 | INFO     | [data] copytool_in thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:23,730 | INFO     | [job] queue monitor thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:23,978 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:24,008 | INFO     | [payload] validate_post thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:26,948 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 11:50:18] 2026-02-07 19:49:50,082 | INFO     | PID=3560835 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 11:50:18] 2026-02-07 19:49:50,083 | INFO     | .. there are 42 such processes running
[2026-02-07 11:50:18] 2026-02-07 19:49:50,084 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 11:50:18] 2026-02-07 19:49:50,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 11:50:18] 2026-02-07 19:49:50,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 11:50:18] 2026-02-07 19:50:11,527 | INFO     | [monitor] cgroup control has ended
[2026-02-07 11:50:18] 2026-02-07 19:50:11,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592847243072)>', '<ExcThread(monitor, started 140592315094784)>']
[2026-02-07 11:50:18] 2026-02-07 19:50:12,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 11:50:18] 2026-02-07 19:50:12,222 | INFO     | [monitor] control thread has ended
[2026-02-07 11:50:18] 2026-02-07 19:50:16,866 | INFO     | all workflow threads have been joined
[2026-02-07 11:50:18] 2026-02-07 19:50:16,866 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 11:50:18] 2026-02-07 19:50:16,866 | INFO     | traces error code: 0
[2026-02-07 11:50:18] 2026-02-07 19:50:16,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 11:50:18] 2026-02-07 19:50:17,420 [wrapper] ==== pilot stdout END ====
[2026-02-07 11:50:18] 2026-02-07 19:50:17,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 11:50:18] 2026-02-07 19:50:17,494 [wrapper] pilotpid: 3560835
[2026-02-07 11:50:18] 2026-02-07 19:50:17,506 [wrapper] Pilot exit status: 0
[2026-02-07 11:50:18] 2026-02-07 19:50:17,565 [wrapper] pandaids: 7000833415
[2026-02-07 11:50:18] 2026-02-07 19:50:17,845 [wrapper] cleanup supervisor_pilot 3560854 3560836
[2026-02-07 11:50:18] 2026-02-07 19:50:17,867 [wrapper] Test setup, not cleaning
[2026-02-07 11:50:18] 2026-02-07 19:50:17,912 [wrapper] apfmon messages muted
[2026-02-07 11:50:18] 2026-02-07 19:50:17,924 [wrapper] ==== wrapper stdout END ====
[2026-02-07 11:50:18] 2026-02-07 19:50:17,938 [wrapper] ==== wrapper stderr END ====
[2026-02-07 11:50:18]  *** Error codes and diagnostics ***
[2026-02-07 11:50:18]     "exeErrorCode": 65,
[2026-02-07 11:50:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 11:50:18]     "pilotErrorCode": 1305,
[2026-02-07 11:50:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 11:50:18]  *** Listing of results directory ***
[2026-02-07 11:50:18] total 488240
[2026-02-07 11:50:18] -rwx------. 1 boinc boinc     36322 Feb  7 05:37 runpilot2-wrapper.sh
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc    584627 Feb  7 05:39 pilot3.tar.gz
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc      5111 Feb  7 05:42 queuedata.json
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc       100 Feb  7 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 11:50:18] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 11:42 run_atlas
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc       105 Feb  7 11:42 job.xml
[2026-02-07 11:50:18] -rw-r--r--. 2 boinc boinc 495785729 Feb  7 11:42 EVNT.48442096._000089.pool.root.1
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc      6594 Feb  7 11:42 init_data.xml
[2026-02-07 11:50:18] -rw-r--r--. 2 boinc boinc     15845 Feb  7 11:42 start_atlas.sh
[2026-02-07 11:50:18] drwxrwx--x. 2 boinc boinc      4096 Feb  7 11:42 shared
[2026-02-07 11:50:18] -rw-r--r--. 2 boinc boinc    597955 Feb  7 11:42 input.tar.gz
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc         0 Feb  7 11:42 boinc_lockfile
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc      2528 Feb  7 11:42 pandaJob.out
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc   1009502 Feb  7 11:43 agis_schedconf.cvmfs.json
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc   1513088 Feb  7 11:43 agis_ddmendpoints.agis.ALL.json
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc       445 Feb  7 11:44 workernode_map.json
[2026-02-07 11:50:18] drwx------. 5 boinc boinc      4096 Feb  7 11:44 pilot3
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc       525 Feb  7 11:47 boinc_task_state.xml
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc       994 Feb  7 11:47 memory_monitor_summary.json
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc     22343 Feb  7 11:47 log.48442098._004445.job.log.tgz.1
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc      7041 Feb  7 11:49 heartbeat.json
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc        95 Feb  7 11:49 pilot_heartbeat.json
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc        23 Feb  7 11:50 wrapper_checkpoint.txt
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc      4819 Feb  7 11:50 pilotlog.txt
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc     96664 Feb  7 11:50 log.48442098._004445.job.log.1
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc      8192 Feb  7 11:50 boinc_mmap_file
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc       188 Feb  7 11:50 output.list
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc       620 Feb  7 11:50 runtime_log
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc    133120 Feb  7 11:50 result.tar.gz
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc      8635 Feb  7 11:50 runtime_log.err
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc       643 Feb  7 11:50 6oPNDm3fx88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUXbKDmtGPXtn.diag
[2026-02-07 11:50:18] -rw-r--r--. 1 boinc boinc     21870 Feb  7 11:50 stderr.txt
[2026-02-07 11:50:18] No HITS result produced
[2026-02-07 11:50:18]  *** Contents of shared directory: ***
[2026-02-07 11:50:18] total 484904
[2026-02-07 11:50:18] -rw-r--r--. 2 boinc boinc 495785729 Feb  7 11:42 ATLAS.root_0
[2026-02-07 11:50:18] -rw-r--r--. 2 boinc boinc     15845 Feb  7 11:42 start_atlas.sh
[2026-02-07 11:50:18] -rw-r--r--. 2 boinc boinc    597955 Feb  7 11:42 input.tar.gz
[2026-02-07 11:50:18] -rw-------. 1 boinc boinc    133120 Feb  7 11:50 result.tar.gz
11:50:20 (3552045): run_atlas exited; CPU time 40.400376
11:50:20 (3552045): called boinc_finish(0)

</stderr_txt>
]]>

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