Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:40:27 (816776): wrapper (7.7.26015): starting
10:40:27 (816776): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 10:40:27] Arguments: --nthreads 12
[2026-02-07 10:40:27] Threads: 12
[2026-02-07 10:40:27] Checking for CVMFS
[2026-02-07 10:40:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 10:40:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 10:40:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 10:40:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 10:40:30] 2.11.5.0 2104101 133857 226332 155992 0 370 23988320 45568001 32572 130560 0 1252455978 99.810 728859427 22232 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-07 10:40:30] CVMFS is ok
[2026-02-07 10:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 10:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 10:40:30] Further information can be found at the LHC@home message board.
[2026-02-07 10:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 10:40:30] Checking for apptainer binary...
[2026-02-07 10:40:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 10:40:30] Running /usr/bin/apptainer --version
[2026-02-07 10:40:30] apptainer version 1.4.1-1.el9
[2026-02-07 10:40:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 10:40:31] wns0090.triumf.lcg
[2026-02-07 10:40:31] apptainer works
[2026-02-07 10:40:31] Set ATHENA_PROC_NUMBER=12
[2026-02-07 10:40:31] Set ATHENA_CORE_NUMBER=12
[2026-02-07 10:40:31] Starting ATLAS job with PandaID=7000833058
[2026-02-07 10:40:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 10:45:21]  *** The last 200 lines of the pilot log: ***
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | WARNING  | wrong length of table data, x=[1770489723.0], y=[26200.0] (must be same and length>=4)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | could have reported an average CPU frequency of 2720 MHz (4 samples)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | ..............................
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . Timing measurements:
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . get job = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . initial setup = 22 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . payload setup = 27 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . stage-in = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . payload execution = 52 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . stage-out = 1 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . log creation = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | ..............................
[2026-02-07 10:45:21] 2026-02-07 18:44:37,439 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 10:45:21] 2026-02-07 18:44:37,439 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000833058/pilotlog.txt
[2026-02-07 10:45:21] 2026-02-07 18:44:37,477 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 10:45:21] - Log from pilotlog.txt -
[2026-02-07 10:45:21] 2026-02-07 18:44:37,436 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000833058/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | INFO     | extracted standard info from prmon json
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | WARNING  | wrong length of table data, x=[1770489723.0], y=[26200.0] (must be same and length>=4)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | could have reported an average CPU frequency of 2720 MHz (4 samples)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | ..............................
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . Timing measurements:
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . get job = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . initial setup = 22 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . payload setup = 27 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . stage-in = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . payload execution = 52 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . stage-out = 1 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . log creation = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | ..............................
[2026-02-07 10:45:21] 2026-02-07 18:44:37,439 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 10:45:21] 2026-02-07 18:44:37,439 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000833058/pilotlog.txt
[2026-02-07 10:45:21] 2026-02-07 18:44:37,478 | WARNING  | 
[2026-02-07 10:45:21] [begin log extracts]
[2026-02-07 10:45:21] - Log from pilotlog.txt -
[2026-02-07 10:45:21] 2026-02-07 18:44:37,436 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000833058/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | INFO     | extracted standard info from prmon json
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 10:45:21] 2026-02-07 18:44:37,437 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | WARNING  | wrong length of table data, x=[1770489723.0], y=[26200.0] (must be same and length>=4)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | could have reported an average CPU frequency of 2720 MHz (4 samples)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | ..............................
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . Timing measurements:
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . get job = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . initial setup = 22 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . payload setup = 27 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . stage-in = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . payload execution = 52 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . stage-out = 1 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | . log creation = 0 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,438 | INFO     | ..............................
[2026-02-07 10:45:21] 2026-02-07 18:44:37,439 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 10:45:21] 2026-02-07 18:44:37,439 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000833058/pilotlog.txt
[2026-02-07 10:45:21] [end log extracts]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,478 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,478 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 10:45:21] 2026-02-07 18:44:37,722 | INFO     | 
[2026-02-07 10:45:21] 2026-02-07 18:44:37,722 | INFO     | job summary report
[2026-02-07 10:45:21] 2026-02-07 18:44:37,722 | INFO     | --------------------------------------------------
[2026-02-07 10:45:21] 2026-02-07 18:44:37,722 | INFO     | PanDA job id: 7000833058
[2026-02-07 10:45:21] 2026-02-07 18:44:37,722 | INFO     | task id: 48442031
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 10:42:29,746 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | pilot state: failed 
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | transexitcode: 65
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | exeerrorcode: 65
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | exitcode: 65
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | cpuconsumptiontime: 14 s
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | nevents: 0
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | neventsw: 0
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | pid: 829666
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | pgrp: 829666
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | corecount: 12
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | event service: False
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | sizes: {0: 2282607, 1: 2283068, 84: 2306349, 86: 2310641, 87: 2310669, 203: 2310835}
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | --------------------------------------------------
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | 
[2026-02-07 10:45:21] 2026-02-07 18:44:37,723 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | job 7000833058 has completed (purged errors)
[2026-02-07 10:45:21] 2026-02-07 18:44:37,805 | INFO     | overall cleanup function is called
[2026-02-07 10:45:21] 2026-02-07 18:44:38,812 | INFO     | --- collectZombieJob: --- 10, [829666]
[2026-02-07 10:45:21] 2026-02-07 18:44:38,812 | INFO     | zombie collector waiting for pid 829666
[2026-02-07 10:45:21] 2026-02-07 18:44:38,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 10:45:21] 2026-02-07 18:44:38,813 | INFO     | collected zombie processes
[2026-02-07 10:45:21] 2026-02-07 18:44:38,813 | INFO     | will attempt to kill all subprocesses of pid=829666
[2026-02-07 10:45:21] 2026-02-07 18:44:39,479 | INFO     | process IDs to be killed: [829666] (in reverse order)
[2026-02-07 10:45:21] 2026-02-07 18:44:39,568 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 10:45:21] 2026-02-07 18:44:39,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 10:45:21] 2026-02-07 18:44:39,611 | INFO     | did not find any defunct processes belonging to 829666
[2026-02-07 10:45:21] 2026-02-07 18:44:39,623 | INFO     | did not find any defunct processes belonging to 829666
[2026-02-07 10:45:21] 2026-02-07 18:44:39,623 | INFO     | ready for new job
[2026-02-07 10:45:21] 2026-02-07 18:44:39,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 10:45:21] 2026-02-07 18:44:39,624 | INFO     | **************************************
[2026-02-07 10:45:21] 2026-02-07 18:44:39,624 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 10:45:21] 2026-02-07 18:44:39,624 | INFO     | **************************************
[2026-02-07 10:45:21] 2026-02-07 18:44:39,624 | INFO     | 
[2026-02-07 10:45:21] 2026-02-07 18:44:39,626 | INFO     | architecture information:
[2026-02-07 10:45:21] 2026-02-07 18:44:39,627 | INFO     | executing command: cat /etc/os-release
[2026-02-07 10:45:21] 2026-02-07 18:44:39,639 | INFO     | cat /etc/os-release:
[2026-02-07 10:45:21] NAME="CentOS Linux"
[2026-02-07 10:45:21] VERSION="7 (Core)"
[2026-02-07 10:45:21] ID="centos"
[2026-02-07 10:45:21] ID_LIKE="rhel fedora"
[2026-02-07 10:45:21] VERSION_ID="7"
[2026-02-07 10:45:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 10:45:21] ANSI_COLOR="0;31"
[2026-02-07 10:45:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 10:45:21] HOME_URL="https://www.centos.org/"
[2026-02-07 10:45:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 10:45:21] 
[2026-02-07 10:45:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 10:45:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 10:45:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 10:45:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 10:45:21] 
[2026-02-07 10:45:21] 2026-02-07 18:44:39,639 | INFO     | **************************************
[2026-02-07 10:45:21] 2026-02-07 18:44:40,142 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 10:45:21] 2026-02-07 18:44:40,187 | INFO     | sufficient remaining disk space (2022978879488 B)
[2026-02-07 10:45:21] 2026-02-07 18:44:40,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 10:45:21] 2026-02-07 18:44:40,187 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 10:45:21] 2026-02-07 18:44:40,187 | INFO     | update_server=False
[2026-02-07 10:45:21] 2026-02-07 18:44:40,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 10:45:21] 2026-02-07 18:44:40,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 10:45:21] 2026-02-07 18:44:40,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 10:45:21] 2026-02-07 18:44:40,274 | INFO     | aborting loop
[2026-02-07 10:45:21] 2026-02-07 18:44:40,335 | INFO     | all data control threads have been joined
[2026-02-07 10:45:21] 2026-02-07 18:44:40,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 10:45:21] 2026-02-07 18:44:40,759 | INFO     | all job control threads have been joined
[2026-02-07 10:45:21] 2026-02-07 18:44:41,128 | INFO     | all payload control threads have been joined
[2026-02-07 10:45:21] 2026-02-07 18:44:41,193 | INFO     | [job] retrieve thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,280 | INFO     | [job] job monitor thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,295 | INFO     | [payload] failed_post thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,341 | INFO     | [data] control thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,719 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,740 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,765 | INFO     | [job] control thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,784 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,844 | INFO     | [payload] validate_post thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:41,863 | INFO     | [job] validate thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:42,134 | INFO     | [payload] control thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:42,209 | INFO     | [data] copytool_out thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:42,270 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:42,540 | INFO     | [data] copytool_in thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:42,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 10:45:21] 2026-02-07 18:44:43,692 | INFO     | [job] queue monitor thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:44:44,726 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 10:45:21] 2026-02-07 18:45:09,351 | INFO     | PID=820618 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 10:45:21] 2026-02-07 18:45:09,351 | INFO     | .. there are 49 such processes running
[2026-02-07 10:45:21] 2026-02-07 18:45:09,353 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 10:45:21] 2026-02-07 18:45:09,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 10:45:21] 2026-02-07 18:45:09,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 10:45:21] 2026-02-07 18:45:13,462 | INFO     | [monitor] cgroup control has ended
[2026-02-07 10:45:21] 2026-02-07 18:45:15,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116112217920)>', '<ExcThread(monitor, started 140115565332224)>']
[2026-02-07 10:45:21] 2026-02-07 18:45:16,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 10:45:21] 2026-02-07 18:45:16,404 | INFO     | [monitor] control thread has ended
[2026-02-07 10:45:21] 2026-02-07 18:45:20,529 | INFO     | all workflow threads have been joined
[2026-02-07 10:45:21] 2026-02-07 18:45:20,529 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 10:45:21] 2026-02-07 18:45:20,530 | INFO     | traces error code: 0
[2026-02-07 10:45:21] 2026-02-07 18:45:20,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 10:45:21] 2026-02-07 18:45:20,924 [wrapper] ==== pilot stdout END ====
[2026-02-07 10:45:21] 2026-02-07 18:45:20,932 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 10:45:21] 2026-02-07 18:45:20,937 [wrapper] pilotpid: 820618
[2026-02-07 10:45:21] 2026-02-07 18:45:20,939 [wrapper] Pilot exit status: 0
[2026-02-07 10:45:21] 2026-02-07 18:45:20,949 [wrapper] pandaids: 7000833058
[2026-02-07 10:45:21] 2026-02-07 18:45:21,002 [wrapper] cleanup supervisor_pilot  820624 820619
[2026-02-07 10:45:21] 2026-02-07 18:45:21,005 [wrapper] Test setup, not cleaning
[2026-02-07 10:45:21] 2026-02-07 18:45:21,007 [wrapper] apfmon messages muted
[2026-02-07 10:45:21] 2026-02-07 18:45:21,008 [wrapper] ==== wrapper stdout END ====
[2026-02-07 10:45:21] 2026-02-07 18:45:21,010 [wrapper] ==== wrapper stderr END ====
[2026-02-07 10:45:21]  *** Error codes and diagnostics ***
[2026-02-07 10:45:21]     "exeErrorCode": 65,
[2026-02-07 10:45:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 10:45:21]     "pilotErrorCode": 1305,
[2026-02-07 10:45:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 10:45:21]  *** Listing of results directory ***
[2026-02-07 10:45:21] total 487484
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc    584627 Feb  7 05:33 pilot3.tar.gz
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc      5111 Feb  7 05:33 queuedata.json
[2026-02-07 10:45:21] -rwx------. 1 boinc boinc     36322 Feb  7 05:34 runpilot2-wrapper.sh
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc       100 Feb  7 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 10:45:21] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 10:40 run_atlas
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc       105 Feb  7 10:40 job.xml
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc      6594 Feb  7 10:40 init_data.xml
[2026-02-07 10:45:21] -rw-r--r--. 2 boinc boinc 495060507 Feb  7 10:40 EVNT.48442027._000069.pool.root.1
[2026-02-07 10:45:21] -rw-r--r--. 2 boinc boinc     15845 Feb  7 10:40 start_atlas.sh
[2026-02-07 10:45:21] drwxrwx--x. 2 boinc boinc      4096 Feb  7 10:40 shared
[2026-02-07 10:45:21] -rw-r--r--. 2 boinc boinc    597963 Feb  7 10:40 input.tar.gz
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc         0 Feb  7 10:40 boinc_lockfile
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc      2528 Feb  7 10:40 pandaJob.out
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc   1009502 Feb  7 10:40 agis_schedconf.cvmfs.json
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc   1513088 Feb  7 10:40 agis_ddmendpoints.agis.ALL.json
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc       444 Feb  7 10:41 workernode_map.json
[2026-02-07 10:45:21] drwx------. 5 boinc boinc      4096 Feb  7 10:41 pilot3
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc       979 Feb  7 10:42 memory_monitor_summary.json
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc     21673 Feb  7 10:42 log.48442031._003463.job.log.tgz.1
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc      7065 Feb  7 10:44 heartbeat.json
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc        95 Feb  7 10:45 pilot_heartbeat.json
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc       524 Feb  7 10:45 boinc_task_state.xml
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc        22 Feb  7 10:45 wrapper_checkpoint.txt
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc      8192 Feb  7 10:45 boinc_mmap_file
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc      4818 Feb  7 10:45 pilotlog.txt
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc     86004 Feb  7 10:45 log.48442031._003463.job.log.1
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc       188 Feb  7 10:45 output.list
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc       620 Feb  7 10:45 runtime_log
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc    122880 Feb  7 10:45 result.tar.gz
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc      8635 Feb  7 10:45 runtime_log.err
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc       643 Feb  7 10:45 OhtNDmDdx88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvPbKDmuRBsVn.diag
[2026-02-07 10:45:21] -rw-r--r--. 1 boinc boinc      2143 Feb  7 10:45 stderr.txt
[2026-02-07 10:45:21] No HITS result produced
[2026-02-07 10:45:21]  *** Contents of shared directory: ***
[2026-02-07 10:45:21] total 484180
[2026-02-07 10:45:21] -rw-r--r--. 2 boinc boinc 495060507 Feb  7 10:40 ATLAS.root_0
[2026-02-07 10:45:21] -rw-r--r--. 2 boinc boinc     15845 Feb  7 10:40 start_atlas.sh
[2026-02-07 10:45:21] -rw-r--r--. 2 boinc boinc    597963 Feb  7 10:40 input.tar.gz
[2026-02-07 10:45:21] -rw-------. 1 boinc boinc    122880 Feb  7 10:45 result.tar.gz
10:45:22 (816776): run_atlas exited; CPU time 22.018257
10:45:22 (816776): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN