Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:24:11 (1238045): wrapper (7.7.26015): starting
08:24:11 (1238045): wrapper: running run_atlas (--nthreads 10)
[2026-02-07 08:24:11] Arguments: --nthreads 10
[2026-02-07 08:24:11] Threads: 10
[2026-02-07 08:24:11] Checking for CVMFS
[2026-02-07 08:24:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 08:24:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 08:24:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 08:24:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 08:24:13] 2.13.3.0 9582 135204 223532 155985 0 220 26720688 40960001 34019 16776704 0 1554434719 99.736 1106051007 48867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 08:24:13] CVMFS is ok
[2026-02-07 08:24:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 08:24:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 08:24:13] Further information can be found at the LHC@home message board.
[2026-02-07 08:24:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 08:24:13] Checking for apptainer binary...
[2026-02-07 08:24:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 08:24:13] Running /usr/bin/apptainer --version
[2026-02-07 08:24:15] apptainer version 1.4.5-2.el9
[2026-02-07 08:24:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 08:24:18] c8-7-4.aglt2.org
[2026-02-07 08:24:18] apptainer works
[2026-02-07 08:24:18] Set ATHENA_PROC_NUMBER=10
[2026-02-07 08:24:18] Set ATHENA_CORE_NUMBER=10
[2026-02-07 08:24:18] Starting ATLAS job with PandaID=6999411203
[2026-02-07 08:24:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 09:48:39]  *** The last 200 lines of the pilot log: ***
[2026-02-07 09:48:39]  guid=cc47c9ec-7eb0-46cb-a33d-95981f265313
[2026-02-07 09:48:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 09:48:39]  is_altstaged=None
[2026-02-07 09:48:39]  is_tar=False
[2026-02-07 09:48:39]  lfn=log.48310749._007058.job.log.tgz.1
[2026-02-07 09:48:39]  mtime=0
[2026-02-07 09:48:39]  protocol_id=None
[2026-02-07 09:48:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 09:48:39]  replicas=None
[2026-02-07 09:48:39]  scope=mc23_13p6TeV
[2026-02-07 09:48:39]  status=None
[2026-02-07 09:48:39]  status_code=0
[2026-02-07 09:48:39]  storage_token=
[2026-02-07 09:48:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6999411203/log.48310749._007058.job.log.tgz.1
[2026-02-07 09:48:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/3c/log.48310749._007058.job.log.tgz.1
[2026-02-07 09:48:39]  workdir=None
[2026-02-07 09:48:39] ]
[2026-02-07 09:48:39] 2026-02-07 14:47:59,617 | INFO     | transferring file log.48310749._007058.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6999411203/log.48310749._007058.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 09:48:39] 2026-02-07 14:47:59,617 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6999411203/log.48310749._007058.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310749._007058.job
[2026-02-07 09:48:39] 2026-02-07 14:47:59,676 | INFO     | adding to output.list: log.48310749._007058.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/3c/log.48310749._007058.job.log.tg
[2026-02-07 09:48:39] 2026-02-07 14:47:59,677 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 09:48:39] 2026-02-07 14:47:59,677 | INFO     | summary of transferred files:
[2026-02-07 09:48:39] 2026-02-07 14:47:59,677 | INFO     |  -- lfn=log.48310749._007058.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 09:48:39] 2026-02-07 14:47:59,677 | INFO     | stage-out finished correctly
[2026-02-07 09:48:39] 2026-02-07 14:47:59,868 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 09:48:39] 2026-02-07 14:47:59,927 | INFO     | time since job start (4899s) is within the limit (349056.0s)
[2026-02-07 09:48:39] 2026-02-07 14:48:01,098 | WARNING  | process 1257592 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 09:48:39] 2026-02-07 14:48:01,098 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999411203/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 09:48:39] 2026-02-07 14:48:01,932 | INFO     | time since job start (4901s) is within the limit (349056.0s)
[2026-02-07 09:48:39] 2026-02-07 14:48:02,437 | INFO     | number of running child processes to parent process 1257592: 1
[2026-02-07 09:48:39] 2026-02-07 14:48:02,437 | INFO     | maximum number of monitored processes: 6
[2026-02-07 09:48:39] 2026-02-07 14:48:02,992 | INFO     | job 6999411203 has state=finished
[2026-02-07 09:48:39] 2026-02-07 14:48:02,993 | INFO     | preparing for final server update for job 6999411203 in state='finished'
[2026-02-07 09:48:39] 2026-02-07 14:48:02,993 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6999411203/jobReport.json
[2026-02-07 09:48:39] 2026-02-07 14:48:02,994 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 09:48:39] 2026-02-07 14:48:02,995 | INFO     | this job has now completed (state=finished)
[2026-02-07 09:48:39] 2026-02-07 14:48:02,995 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 09:48:39] 2026-02-07 14:48:02,995 | INFO     | log transfer has been attempted: DONE
[2026-02-07 09:48:39] 2026-02-07 14:48:02,995 | INFO     | job 6999411203 has finished - writing final server update
[2026-02-07 09:48:39] 2026-02-07 14:48:02,995 | INFO     | total number of processed events: 400 (read)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,020 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999411203/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,020 | INFO     | extracted standard info from prmon json
[2026-02-07 09:48:39] 2026-02-07 14:48:03,020 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 09:48:39] 2026-02-07 14:48:03,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 09:48:39] 2026-02-07 14:48:03,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 09:48:39] 2026-02-07 14:48:03,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | fitting pss+swap vs Time
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | sum of square deviations: 115716699.65277782
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | sum of deviations: 4093568140.583333
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | mean x: 1770473354.5694444
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | mean y: 2600772.0833333335
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | intersect: -62629269474.51333
[2026-02-07 09:48:39] 2026-02-07 14:48:03,026 | INFO     | chi2: 0.7926609236867672
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | current memory leak: 35.38 B/s (using 72 data points, chi2=0.79)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | could have reported an average CPU frequency of 3772 MHz (6 samples)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | ..............................
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . Timing measurements:
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . get job = 0 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . initial setup = 44 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . payload setup = 59 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . stage-in = 0 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . payload execution = 4819 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . stage-out = 3 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | . log creation = 0 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,027 | INFO     | ..............................
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | 
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | job summary report
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | --------------------------------------------------
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | PanDA job id: 6999411203
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | task id: 48310749
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | errors: (none)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | pilot state: finished 
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | transexitcode: 0
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | exeerrorcode: 0
[2026-02-07 09:48:39] 2026-02-07 14:48:03,147 | INFO     | exeerrordiag: 
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | exitcode: 0
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | exitmsg: OK
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | cpuconsumptiontime: 21555 s
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | nevents: 400
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | neventsw: 0
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | pid: 1257592
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | pgrp: 1257592
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | corecount: 10
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | event service: False
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | sizes: {0: 2282607, 1: 2282635, 2: 2283068, 13: 2283096, 4882: 2309364, 4886: 2318546, 4889: 2318684}
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | --------------------------------------------------
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | 
[2026-02-07 09:48:39] 2026-02-07 14:48:03,148 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | job 6999411203 has completed (purged errors)
[2026-02-07 09:48:39] 2026-02-07 14:48:03,221 | INFO     | overall cleanup function is called
[2026-02-07 09:48:39] 2026-02-07 14:48:04,228 | INFO     | --- collectZombieJob: --- 10, [1257592]
[2026-02-07 09:48:39] 2026-02-07 14:48:04,229 | INFO     | zombie collector waiting for pid 1257592
[2026-02-07 09:48:39] 2026-02-07 14:48:04,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 09:48:39] 2026-02-07 14:48:04,229 | INFO     | collected zombie processes
[2026-02-07 09:48:39] 2026-02-07 14:48:04,229 | INFO     | will attempt to kill all subprocesses of pid=1257592
[2026-02-07 09:48:39] 2026-02-07 14:48:05,368 | INFO     | process IDs to be killed: [1257592] (in reverse order)
[2026-02-07 09:48:39] 2026-02-07 14:48:05,705 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 09:48:39] 2026-02-07 14:48:05,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 09:48:39] 2026-02-07 14:48:05,776 | INFO     | did not find any defunct processes belonging to 1257592
[2026-02-07 09:48:39] 2026-02-07 14:48:05,802 | INFO     | did not find any defunct processes belonging to 1257592
[2026-02-07 09:48:39] 2026-02-07 14:48:05,802 | INFO     | ready for new job
[2026-02-07 09:48:39] 2026-02-07 14:48:05,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 09:48:39] 2026-02-07 14:48:05,804 | INFO     | **************************************
[2026-02-07 09:48:39] 2026-02-07 14:48:05,804 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 09:48:39] 2026-02-07 14:48:05,804 | INFO     | **************************************
[2026-02-07 09:48:39] 2026-02-07 14:48:05,804 | INFO     | 
[2026-02-07 09:48:39] 2026-02-07 14:48:05,809 | INFO     | architecture information:
[2026-02-07 09:48:39] 2026-02-07 14:48:05,809 | INFO     | executing command: cat /etc/os-release
[2026-02-07 09:48:39] 2026-02-07 14:48:05,869 | INFO     | cat /etc/os-release:
[2026-02-07 09:48:39] NAME="CentOS Linux"
[2026-02-07 09:48:39] VERSION="7 (Core)"
[2026-02-07 09:48:39] ID="centos"
[2026-02-07 09:48:39] ID_LIKE="rhel fedora"
[2026-02-07 09:48:39] VERSION_ID="7"
[2026-02-07 09:48:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 09:48:39] ANSI_COLOR="0;31"
[2026-02-07 09:48:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 09:48:39] HOME_URL="https://www.centos.org/"
[2026-02-07 09:48:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 09:48:39] 
[2026-02-07 09:48:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 09:48:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 09:48:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 09:48:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 09:48:39] 
[2026-02-07 09:48:39] 2026-02-07 14:48:05,869 | INFO     | **************************************
[2026-02-07 09:48:39] 2026-02-07 14:48:06,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 09:48:39] 2026-02-07 14:48:06,435 | INFO     | sufficient remaining disk space (163770793984 B)
[2026-02-07 09:48:39] 2026-02-07 14:48:06,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 09:48:39] 2026-02-07 14:48:06,436 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 09:48:39] 2026-02-07 14:48:06,436 | INFO     | update_server=False
[2026-02-07 09:48:39] 2026-02-07 14:48:06,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 09:48:39] 2026-02-07 14:48:06,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 09:48:39] 2026-02-07 14:48:06,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 09:48:39] 2026-02-07 14:48:06,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 09:48:39] 2026-02-07 14:48:06,439 | INFO     | aborting loop
[2026-02-07 09:48:39] 2026-02-07 14:48:07,289 | INFO     | all data control threads have been joined
[2026-02-07 09:48:39] 2026-02-07 14:48:07,442 | INFO     | [job] retrieve thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:07,444 | INFO     | [job] job monitor thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:07,472 | INFO     | all payload control threads have been joined
[2026-02-07 09:48:39] 2026-02-07 14:48:07,539 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:07,551 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:07,935 | INFO     | all job control threads have been joined
[2026-02-07 09:48:39] 2026-02-07 14:48:08,053 | INFO     | [data] copytool_in thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,054 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,089 | INFO     | [job] validate thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,113 | INFO     | [payload] validate_post thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 09:48:39] 2026-02-07 14:48:08,295 | INFO     | [data] control thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,443 | INFO     | [data] copytool_out thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,479 | INFO     | [payload] control thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,775 | INFO     | [payload] failed_post thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,777 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:08,941 | INFO     | [job] control thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:09,183 | INFO     | [job] queue monitor thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:10,446 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 09:48:39] 2026-02-07 14:48:28,440 | INFO     | [monitor] cgroup control has ended
[2026-02-07 09:48:39] 2026-02-07 14:48:30,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698315437888)>', '<ExcThread(monitor, started 139697829439232)>']
[2026-02-07 09:48:39] 2026-02-07 14:48:35,466 | INFO     | all workflow threads have been joined
[2026-02-07 09:48:39] 2026-02-07 14:48:35,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 09:48:39] 2026-02-07 14:48:35,467 | INFO     | traces error code: 0
[2026-02-07 09:48:39] 2026-02-07 14:48:35,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 09:48:39] 2026-02-07 14:48:37,354 | INFO     | PID=1250194 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 09:48:39] 2026-02-07 14:48:37,354 | INFO     | .. there are 43 such processes running
[2026-02-07 09:48:39] 2026-02-07 14:48:37,364 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 09:48:39] 2026-02-07 14:48:37,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 09:48:39] 2026-02-07 14:48:37,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 09:48:39] 2026-02-07 14:48:37,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 09:48:39] 2026-02-07 14:48:37,364 | INFO     | [monitor] control thread has ended
[2026-02-07 09:48:39] 2026-02-07 14:48:37,813 [wrapper] ==== pilot stdout END ====
[2026-02-07 09:48:39] 2026-02-07 14:48:37,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 09:48:39] 2026-02-07 14:48:37,857 [wrapper] pilotpid: 1250194
[2026-02-07 09:48:39] 2026-02-07 14:48:37,882 [wrapper] Pilot exit status: 0
[2026-02-07 09:48:39] 2026-02-07 14:48:38,003 [wrapper] pandaids: 6999411203
[2026-02-07 09:48:39] 2026-02-07 14:48:38,430 [wrapper] cleanup supervisor_pilot 1618880 1250195
[2026-02-07 09:48:39] 2026-02-07 14:48:38,460 [wrapper] Test setup, not cleaning
[2026-02-07 09:48:39] 2026-02-07 14:48:38,479 [wrapper] apfmon messages muted
[2026-02-07 09:48:39] 2026-02-07 14:48:38,499 [wrapper] ==== wrapper stdout END ====
[2026-02-07 09:48:39] 2026-02-07 14:48:38,510 [wrapper] ==== wrapper stderr END ====
[2026-02-07 09:48:39]  *** Error codes and diagnostics ***
[2026-02-07 09:48:39]     "exeErrorCode": 0,
[2026-02-07 09:48:39]     "exeErrorDiag": "",
[2026-02-07 09:48:39]     "pilotErrorCode": 0,
[2026-02-07 09:48:39]     "pilotErrorDiag": "",
[2026-02-07 09:48:39]  *** Listing of results directory ***
[2026-02-07 09:48:39] total 669188
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas      5111 Feb  7 00:41 queuedata.json
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas    584627 Feb  7 00:41 pilot3.tar.gz
[2026-02-07 09:48:39] -rwx------. 1 boincer umatlas     36322 Feb  7 00:41 runpilot2-wrapper.sh
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas       100 Feb  7 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 09:48:39] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 08:24 run_atlas
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas       105 Feb  7 08:24 job.xml
[2026-02-07 09:48:39] -rw-r--r--. 2 boincer umatlas 496873501 Feb  7 08:24 EVNT.48310747._000133.pool.root.1
[2026-02-07 09:48:39] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 08:24 shared
[2026-02-07 09:48:39] -rw-r--r--. 2 boincer umatlas    597949 Feb  7 08:24 input.tar.gz
[2026-02-07 09:48:39] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 08:24 start_atlas.sh
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas         0 Feb  7 08:24 boinc_lockfile
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas      2524 Feb  7 08:24 pandaJob.out
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas        57 Feb  7 08:24 setup.sh.local
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas   1009510 Feb  7 08:25 agis_schedconf.cvmfs.json
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas   1513088 Feb  7 08:25 agis_ddmendpoints.agis.ALL.json
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas       430 Feb  7 08:26 workernode_map.json
[2026-02-07 09:48:39] drwx------. 5 boincer umatlas      4096 Feb  7 08:26 pilot3
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas      7171 Feb  7 09:45 init_data.xml
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas 182382657 Feb  7 09:45 HITS.48310749._007058.pool.root.1
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas       530 Feb  7 09:46 boinc_task_state.xml
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas      1055 Feb  7 09:47 memory_monitor_summary.json
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas    371194 Feb  7 09:47 log.48310749._007058.job.log.tgz.1
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas      6361 Feb  7 09:48 heartbeat.json
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas       823 Feb  7 09:48 pilotlog.txt
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas        95 Feb  7 09:48 pilot_heartbeat.json
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 09:48 boinc_mmap_file
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas        27 Feb  7 09:48 wrapper_checkpoint.txt
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas    655095 Feb  7 09:48 log.48310749._007058.job.log.1
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas       357 Feb  7 09:48 output.list
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas       620 Feb  7 09:48 runtime_log
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas   1044480 Feb  7 09:48 result.tar.gz
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas      9333 Feb  7 09:48 runtime_log.err
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas       655 Feb  7 09:48 1wKLDmlFq88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6faKDm7bWNGn.diag
[2026-02-07 09:48:39] -rw-r--r--. 1 boincer umatlas     21437 Feb  7 09:48 stderr.txt
[2026-02-07 09:48:39] HITS file was successfully produced:
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas 182382657 Feb  7 09:45 shared/HITS.pool.root.1
[2026-02-07 09:48:39]  *** Contents of shared directory: ***
[2026-02-07 09:48:39] total 664968
[2026-02-07 09:48:39] -rw-r--r--. 2 boincer umatlas 496873501 Feb  7 08:24 ATLAS.root_0
[2026-02-07 09:48:39] -rw-r--r--. 2 boincer umatlas    597949 Feb  7 08:24 input.tar.gz
[2026-02-07 09:48:39] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 08:24 start_atlas.sh
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas 182382657 Feb  7 09:45 HITS.pool.root.1
[2026-02-07 09:48:39] -rw-------. 1 boincer umatlas   1044480 Feb  7 09:48 result.tar.gz
09:48:40 (1238045): run_atlas exited; CPU time 21727.389544
09:48:40 (1238045): called boinc_finish(0)

</stderr_txt>
]]>

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