Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:45:47 (6922): wrapper (7.7.26015): starting
07:45:47 (6922): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 07:45:47] Arguments: --nthreads 12
[2026-02-07 07:45:47] Threads: 12
[2026-02-07 07:45:47] Checking for CVMFS
[2026-02-07 07:45:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 07:45:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 07:45:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 07:45:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 07:45:48] 2.11.2.0 28623 385443 97432 155984 2 49 18878729 20275201 1 130560 4 167248329 99.948 22546006 16841 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 07:45:48] CVMFS is ok
[2026-02-07 07:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 07:45:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 07:45:48] Further information can be found at the LHC@home message board.
[2026-02-07 07:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 07:45:48] Checking for apptainer binary...
[2026-02-07 07:45:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 07:45:48] Running /usr/bin/apptainer --version
[2026-02-07 07:45:48] apptainer version 1.3.2-1.el7
[2026-02-07 07:45:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 07:45:50] c-205-20.aglt2.org
[2026-02-07 07:45:50] apptainer works
[2026-02-07 07:45:50] Set ATHENA_PROC_NUMBER=12
[2026-02-07 07:45:50] Set ATHENA_CORE_NUMBER=12
[2026-02-07 07:45:50] Starting ATLAS job with PandaID=6999412240
[2026-02-07 07:45:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 09:04:23]  *** The last 200 lines of the pilot log: ***
[2026-02-07 09:04:23]  guid=d2a6c35a-e4ad-4b74-94d1-953ce4170e1f
[2026-02-07 09:04:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 09:04:23]  is_altstaged=None
[2026-02-07 09:04:23]  is_tar=False
[2026-02-07 09:04:23]  lfn=log.48318034._010593.job.log.tgz.1
[2026-02-07 09:04:23]  mtime=0
[2026-02-07 09:04:23]  protocol_id=None
[2026-02-07 09:04:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 09:04:23]  replicas=None
[2026-02-07 09:04:23]  scope=mc23_13p6TeV
[2026-02-07 09:04:23]  status=None
[2026-02-07 09:04:23]  status_code=0
[2026-02-07 09:04:23]  storage_token=
[2026-02-07 09:04:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6999412240/log.48318034._010593.job.log.tgz.1
[2026-02-07 09:04:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/f9/log.48318034._010593.job.log.tgz.1
[2026-02-07 09:04:23]  workdir=None
[2026-02-07 09:04:23] ]
[2026-02-07 09:04:23] 2026-02-07 14:03:45,460 | INFO     | transferring file log.48318034._010593.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6999412240/log.48318034._010593.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 09:04:23] 2026-02-07 14:03:45,460 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6999412240/log.48318034._010593.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318034._010593.job
[2026-02-07 09:04:23] 2026-02-07 14:03:45,482 | INFO     | adding to output.list: log.48318034._010593.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/f9/log.48318034._010593.job.log.tg
[2026-02-07 09:04:23] 2026-02-07 14:03:45,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 09:04:23] 2026-02-07 14:03:45,483 | INFO     | summary of transferred files:
[2026-02-07 09:04:23] 2026-02-07 14:03:45,484 | INFO     |  -- lfn=log.48318034._010593.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 09:04:23] 2026-02-07 14:03:45,484 | INFO     | stage-out finished correctly
[2026-02-07 09:04:23] 2026-02-07 14:03:46,208 | INFO     | time since job start (4656s) is within the limit (349056.0s)
[2026-02-07 09:04:23] 2026-02-07 14:03:46,874 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 09:04:23] 2026-02-07 14:03:47,681 | WARNING  | process 15318 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 09:04:23] 2026-02-07 14:03:47,681 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999412240/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 09:04:23] 2026-02-07 14:03:47,765 | INFO     | number of running child processes to parent process 15318: 1
[2026-02-07 09:04:23] 2026-02-07 14:03:47,765 | INFO     | maximum number of monitored processes: 6
[2026-02-07 09:04:23] 2026-02-07 14:03:48,212 | INFO     | time since job start (4658s) is within the limit (349056.0s)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,650 | INFO     | job 6999412240 has state=finished
[2026-02-07 09:04:23] 2026-02-07 14:03:49,650 | INFO     | preparing for final server update for job 6999412240 in state='finished'
[2026-02-07 09:04:23] 2026-02-07 14:03:49,656 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6999412240/jobReport.json
[2026-02-07 09:04:23] 2026-02-07 14:03:49,659 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 09:04:23] 2026-02-07 14:03:49,659 | INFO     | this job has now completed (state=finished)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,659 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,660 | INFO     | log transfer has been attempted: DONE
[2026-02-07 09:04:23] 2026-02-07 14:03:49,660 | INFO     | job 6999412240 has finished - writing final server update
[2026-02-07 09:04:23] 2026-02-07 14:03:49,660 | INFO     | total number of processed events: 400 (read)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,662 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999412240/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,663 | INFO     | extracted standard info from prmon json
[2026-02-07 09:04:23] 2026-02-07 14:03:49,663 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 09:04:23] 2026-02-07 14:03:49,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 09:04:23] 2026-02-07 14:03:49,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 09:04:23] 2026-02-07 14:03:49,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 09:04:23] 2026-02-07 14:03:49,666 | INFO     | fitting pss+swap vs Time
[2026-02-07 09:04:23] 2026-02-07 14:03:49,666 | INFO     | sum of square deviations: 101843770.0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,666 | INFO     | sum of deviations: -6516431872.0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,666 | INFO     | mean x: 1770470773.0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,667 | INFO     | mean y: 2759921.579710145
[2026-02-07 09:04:23] 2026-02-07 14:03:49,667 | INFO     | intersect: 113285606517.12186
[2026-02-07 09:04:23] 2026-02-07 14:03:49,667 | INFO     | chi2: 0.11820695458654046
[2026-02-07 09:04:23] 2026-02-07 14:03:49,667 | INFO     | current memory leak: -63.98 B/s (using 69 data points, chi2=0.12)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | ..............................
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . Timing measurements:
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . get job = 0 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . initial setup = 7 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . payload setup = 7 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . stage-in = 0 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . payload execution = 4632 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,668 | INFO     | . stage-out = 0 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,669 | INFO     | . log creation = 0 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,669 | INFO     | ..............................
[2026-02-07 09:04:23] 2026-02-07 14:03:49,747 | INFO     | 
[2026-02-07 09:04:23] 2026-02-07 14:03:49,747 | INFO     | job summary report
[2026-02-07 09:04:23] 2026-02-07 14:03:49,747 | INFO     | --------------------------------------------------
[2026-02-07 09:04:23] 2026-02-07 14:03:49,747 | INFO     | PanDA job id: 6999412240
[2026-02-07 09:04:23] 2026-02-07 14:03:49,747 | INFO     | task id: 48318034
[2026-02-07 09:04:23] 2026-02-07 14:03:49,747 | INFO     | errors: (none)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | pilot state: finished 
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | transexitcode: 0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | exeerrorcode: 0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | exeerrordiag: 
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | exitcode: 0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | exitmsg: OK
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | cpuconsumptiontime: 49518 s
[2026-02-07 09:04:23] 2026-02-07 14:03:49,748 | INFO     | nevents: 400
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | neventsw: 0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | pid: 15318
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | pgrp: 15318
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | corecount: 12
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | event service: False
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | sizes: {0: 2282846, 1: 2283052, 11: 2283080, 4643: 2309210, 4644: 2318208, 4645: 2318264, 4648: 2318586}
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | --------------------------------------------------
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | 
[2026-02-07 09:04:23] 2026-02-07 14:03:49,749 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 09:04:23] 2026-02-07 14:03:49,779 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,779 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,781 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,782 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 09:04:23] 2026-02-07 14:03:49,782 | INFO     | job 6999412240 has completed (purged errors)
[2026-02-07 09:04:23] 2026-02-07 14:03:49,782 | INFO     | overall cleanup function is called
[2026-02-07 09:04:23] 2026-02-07 14:03:50,790 | INFO     | --- collectZombieJob: --- 10, [15318]
[2026-02-07 09:04:23] 2026-02-07 14:03:50,790 | INFO     | zombie collector waiting for pid 15318
[2026-02-07 09:04:23] 2026-02-07 14:03:50,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 09:04:23] 2026-02-07 14:03:50,791 | INFO     | collected zombie processes
[2026-02-07 09:04:23] 2026-02-07 14:03:50,791 | INFO     | will attempt to kill all subprocesses of pid=15318
[2026-02-07 09:04:23] 2026-02-07 14:03:50,879 | INFO     | process IDs to be killed: [15318] (in reverse order)
[2026-02-07 09:04:23] 2026-02-07 14:03:50,931 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 09:04:23] 2026-02-07 14:03:50,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 09:04:23] 2026-02-07 14:03:50,935 | INFO     | did not find any defunct processes belonging to 15318
[2026-02-07 09:04:23] 2026-02-07 14:03:50,939 | INFO     | did not find any defunct processes belonging to 15318
[2026-02-07 09:04:23] 2026-02-07 14:03:50,939 | INFO     | ready for new job
[2026-02-07 09:04:23] 2026-02-07 14:03:50,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 09:04:23] 2026-02-07 14:03:50,940 | INFO     | **************************************
[2026-02-07 09:04:23] 2026-02-07 14:03:50,940 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 09:04:23] 2026-02-07 14:03:50,940 | INFO     | **************************************
[2026-02-07 09:04:23] 2026-02-07 14:03:50,940 | INFO     | 
[2026-02-07 09:04:23] 2026-02-07 14:03:50,941 | INFO     | architecture information:
[2026-02-07 09:04:23] 2026-02-07 14:03:50,941 | INFO     | executing command: cat /etc/os-release
[2026-02-07 09:04:23] 2026-02-07 14:03:50,956 | INFO     | cat /etc/os-release:
[2026-02-07 09:04:23] NAME="CentOS Linux"
[2026-02-07 09:04:23] VERSION="7 (Core)"
[2026-02-07 09:04:23] ID="centos"
[2026-02-07 09:04:23] ID_LIKE="rhel fedora"
[2026-02-07 09:04:23] VERSION_ID="7"
[2026-02-07 09:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 09:04:23] ANSI_COLOR="0;31"
[2026-02-07 09:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 09:04:23] HOME_URL="https://www.centos.org/"
[2026-02-07 09:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 09:04:23] 
[2026-02-07 09:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 09:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 09:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 09:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 09:04:23] 
[2026-02-07 09:04:23] 2026-02-07 14:03:50,956 | INFO     | **************************************
[2026-02-07 09:04:23] 2026-02-07 14:03:51,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 09:04:23] 2026-02-07 14:03:51,476 | INFO     | sufficient remaining disk space (28785508352 B)
[2026-02-07 09:04:23] 2026-02-07 14:03:51,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 09:04:23] 2026-02-07 14:03:51,476 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 09:04:23] 2026-02-07 14:03:51,476 | INFO     | update_server=False
[2026-02-07 09:04:23] 2026-02-07 14:03:51,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 09:04:23] 2026-02-07 14:03:51,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 09:04:23] 2026-02-07 14:03:51,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 09:04:23] 2026-02-07 14:03:51,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 09:04:23] 2026-02-07 14:03:51,478 | INFO     | aborting loop
[2026-02-07 09:04:23] 2026-02-07 14:03:52,032 | INFO     | all data control threads have been joined
[2026-02-07 09:04:23] 2026-02-07 14:03:52,103 | INFO     | all payload control threads have been joined
[2026-02-07 09:04:23] 2026-02-07 14:03:52,479 | INFO     | [job] queue monitor thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:52,482 | INFO     | [job] retrieve thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:52,483 | INFO     | [job] job monitor thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:52,647 | INFO     | [payload] failed_post thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:52,798 | INFO     | all job control threads have been joined
[2026-02-07 09:04:23] 2026-02-07 14:03:52,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 09:04:23] 2026-02-07 14:03:53,037 | INFO     | [data] control thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,108 | INFO     | [payload] control thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,142 | INFO     | [job] validate thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,168 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,272 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,483 | INFO     | [data] copytool_out thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,751 | INFO     | [payload] validate_post thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,802 | INFO     | [job] control thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,862 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:53,970 | INFO     | [data] copytool_in thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:03:56,962 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:04:02,339 | INFO     | job.realtimelogging is not enabled
[2026-02-07 09:04:23] 2026-02-07 14:04:03,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 09:04:23] 2026-02-07 14:04:17,440 | INFO     | [monitor] cgroup control has ended
[2026-02-07 09:04:23] 2026-02-07 14:04:18,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938493970240)>', '<ExcThread(monitor, started 139937642948352)>']
[2026-02-07 09:04:23] 2026-02-07 14:04:21,402 | INFO     | PID=10934 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 09:04:23] 2026-02-07 14:04:21,403 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 09:04:23] 2026-02-07 14:04:21,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 09:04:23] 2026-02-07 14:04:21,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 09:04:23] 2026-02-07 14:04:21,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 09:04:23] 2026-02-07 14:04:21,403 | INFO     | [monitor] control thread has ended
[2026-02-07 09:04:23] 2026-02-07 14:04:23,090 | INFO     | all workflow threads have been joined
[2026-02-07 09:04:23] 2026-02-07 14:04:23,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 09:04:23] 2026-02-07 14:04:23,091 | INFO     | traces error code: 0
[2026-02-07 09:04:23] 2026-02-07 14:04:23,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 09:04:23] 2026-02-07 14:04:23,184 [wrapper] ==== pilot stdout END ====
[2026-02-07 09:04:23] 2026-02-07 14:04:23,188 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 09:04:23] 2026-02-07 14:04:23,191 [wrapper] pilotpid: 10934
[2026-02-07 09:04:23] 2026-02-07 14:04:23,195 [wrapper] Pilot exit status: 0
[2026-02-07 09:04:23] 2026-02-07 14:04:23,210 [wrapper] pandaids: 6999412240
[2026-02-07 09:04:23] 2026-02-07 14:04:23,249 [wrapper] cleanup supervisor_pilot  5146 10949
[2026-02-07 09:04:23] 2026-02-07 14:04:23,253 [wrapper] Test setup, not cleaning
[2026-02-07 09:04:23] 2026-02-07 14:04:23,257 [wrapper] apfmon messages muted
[2026-02-07 09:04:23] 2026-02-07 14:04:23,261 [wrapper] ==== wrapper stdout END ====
[2026-02-07 09:04:23] 2026-02-07 14:04:23,265 [wrapper] ==== wrapper stderr END ====
[2026-02-07 09:04:23]  *** Error codes and diagnostics ***
[2026-02-07 09:04:23]     "exeErrorCode": 0,
[2026-02-07 09:04:23]     "exeErrorDiag": "",
[2026-02-07 09:04:23]     "pilotErrorCode": 0,
[2026-02-07 09:04:23]     "pilotErrorDiag": "",
[2026-02-07 09:04:23]  *** Listing of results directory ***
[2026-02-07 09:04:23] total 678648
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 00:41 pilot3.tar.gz
[2026-02-07 09:04:23] -rwx------ 1 boincer umatlas     36322 Feb  7 00:42 runpilot2-wrapper.sh
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 00:43 queuedata.json
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas       100 Feb  7 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 09:04:23] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 07:45 run_atlas
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas       105 Feb  7 07:45 job.xml
[2026-02-07 09:04:23] -rw-r--r-- 2 boincer umatlas 502130739 Feb  7 07:45 EVNT.48318032._000202.pool.root.1
[2026-02-07 09:04:23] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 07:45 start_atlas.sh
[2026-02-07 09:04:23] drwxrwx--x 2 boincer umatlas      4096 Feb  7 07:45 shared
[2026-02-07 09:04:23] -rw-r--r-- 2 boincer umatlas    597951 Feb  7 07:45 input.tar.gz
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas         0 Feb  7 07:45 boinc_lockfile
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas      2536 Feb  7 07:45 pandaJob.out
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas        57 Feb  7 07:45 setup.sh.local
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas   1009494 Feb  7 07:46 agis_schedconf.cvmfs.json
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas   1513088 Feb  7 07:46 agis_ddmendpoints.agis.ALL.json
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas       445 Feb  7 07:46 workernode_map.json
[2026-02-07 09:04:23] drwx------ 5 boincer umatlas      4096 Feb  7 07:46 pilot3
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas      5953 Feb  7 09:00 init_data.xml
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas 186767082 Feb  7 09:03 HITS.48318034._010593.pool.root.1
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas       530 Feb  7 09:03 boinc_task_state.xml
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas      1043 Feb  7 09:03 memory_monitor_summary.json
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas    372989 Feb  7 09:03 log.48318034._010593.job.log.tgz.1
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas      6432 Feb  7 09:03 heartbeat.json
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 09:04 boinc_mmap_file
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas        27 Feb  7 09:04 wrapper_checkpoint.txt
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas        95 Feb  7 09:04 pilot_heartbeat.json
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas      4814 Feb  7 09:04 pilotlog.txt
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas    675930 Feb  7 09:04 log.48318034._010593.job.log.1
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas       357 Feb  7 09:04 output.list
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas       620 Feb  7 09:04 runtime_log
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas   1064960 Feb  7 09:04 result.tar.gz
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas      9343 Feb  7 09:04 runtime_log.err
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas       659 Feb  7 09:04 ejVLDmEGq88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtiaKDm9jy8Um.diag
[2026-02-07 09:04:23] -rw-r--r-- 1 boincer umatlas     21377 Feb  7 09:04 stderr.txt
[2026-02-07 09:04:23] HITS file was successfully produced:
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas 186767082 Feb  7 09:03 shared/HITS.pool.root.1
[2026-02-07 09:04:23]  *** Contents of shared directory: ***
[2026-02-07 09:04:23] total 674396
[2026-02-07 09:04:23] -rw-r--r-- 2 boincer umatlas 502130739 Feb  7 07:45 ATLAS.root_0
[2026-02-07 09:04:23] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 07:45 start_atlas.sh
[2026-02-07 09:04:23] -rw-r--r-- 2 boincer umatlas    597951 Feb  7 07:45 input.tar.gz
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas 186767082 Feb  7 09:03 HITS.pool.root.1
[2026-02-07 09:04:23] -rw------- 1 boincer umatlas   1064960 Feb  7 09:04 result.tar.gz
09:04:25 (6922): run_atlas exited; CPU time 49502.096082
09:04:25 (6922): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN