Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:27:20 (2166335): wrapper (7.7.26015): starting
07:27:20 (2166335): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 07:27:20] Arguments: --nthreads 8
[2026-02-07 07:27:20] Threads: 8
[2026-02-07 07:27:20] Checking for CVMFS
[2026-02-07 07:27:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 07:27:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 07:27:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 07:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 07:27:22] 2.13.3.0 8759 63139 146200 155984 0 433 35064637 40960000 32158 16776704 0 488005729 99.706 363575850 45296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 07:27:22] CVMFS is ok
[2026-02-07 07:27:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 07:27:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 07:27:22] Further information can be found at the LHC@home message board.
[2026-02-07 07:27:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 07:27:22] Checking for apptainer binary...
[2026-02-07 07:27:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 07:27:22] Running /usr/bin/apptainer --version
[2026-02-07 07:27:22] apptainer version 1.4.5-2.el9
[2026-02-07 07:27:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 07:27:23] c-208-39.aglt2.org
[2026-02-07 07:27:23] apptainer works
[2026-02-07 07:27:23] Set ATHENA_PROC_NUMBER=8
[2026-02-07 07:27:23] Set ATHENA_CORE_NUMBER=8
[2026-02-07 07:27:23] Starting ATLAS job with PandaID=6998621229
[2026-02-07 07:27:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 08:59:32]  *** The last 200 lines of the pilot log: ***
[2026-02-07 08:59:32]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6998621229/log.48318034._010321.job.log.tgz.1
[2026-02-07 08:59:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/62/log.48318034._010321.job.log.tgz.1
[2026-02-07 08:59:32]  workdir=None
[2026-02-07 08:59:32] ]
[2026-02-07 08:59:32] 2026-02-07 13:58:34,335 | INFO     | transferring file log.48318034._010321.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6998621229/log.48318034._010321.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 08:59:32] 2026-02-07 13:58:34,335 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6998621229/log.48318034._010321.job.log.tgz.1 /tmp/boinchome/slots/1/log.48318034._010321.job
[2026-02-07 08:59:32] 2026-02-07 13:58:34,417 | INFO     | adding to output.list: log.48318034._010321.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/62/log.48318034._010321.job.log.tg
[2026-02-07 08:59:32] 2026-02-07 13:58:34,417 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 08:59:32] 2026-02-07 13:58:34,417 | INFO     | summary of transferred files:
[2026-02-07 08:59:32] 2026-02-07 13:58:34,418 | INFO     |  -- lfn=log.48318034._010321.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 08:59:32] 2026-02-07 13:58:34,418 | INFO     | stage-out finished correctly
[2026-02-07 08:59:32] 2026-02-07 13:58:34,661 | INFO     | time since job start (5359s) is within the limit (349056.0s)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,010 | WARNING  | process 2195350 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 08:59:32] 2026-02-07 13:58:35,010 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6998621229/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,011 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2938600 B
[2026-02-07 08:59:32] 2026-02-07 13:58:35,011 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15835 B
[2026-02-07 08:59:32] 2026-02-07 13:58:35,011 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 08:59:32] 2026-02-07 13:58:35,077 | INFO     | sufficient remaining disk space (164680957952 B)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,077 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,078 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6998621229: 3242938 B (within 5033164800 B limit)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,078 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6998621229/HITS.48318034._010321.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,078 | INFO     | total size of present files: 0 B (workdir size: 3242938 B)
[2026-02-07 08:59:32] 2026-02-07 13:58:35,078 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6998621229/HITS.48318034._010321.pool.root.1 since it does not exist
[2026-02-07 08:59:32] 2026-02-07 13:58:35,824 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 08:59:32] 2026-02-07 13:58:36,225 | INFO     | number of running child processes to parent process 2195350: 1
[2026-02-07 08:59:32] 2026-02-07 13:58:36,225 | INFO     | maximum number of monitored processes: 6
[2026-02-07 08:59:32] 2026-02-07 13:58:36,581 | INFO     | job 6998621229 has state=finished
[2026-02-07 08:59:32] 2026-02-07 13:58:36,581 | INFO     | preparing for final server update for job 6998621229 in state='finished'
[2026-02-07 08:59:32] 2026-02-07 13:58:36,675 | INFO     | time since job start (5361s) is within the limit (349056.0s)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,698 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,699 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6998621229/jobReport.json
[2026-02-07 08:59:32] 2026-02-07 13:58:36,756 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-07 08:59:32] 2026-02-07 13:58:36,757 | INFO     | this job has now completed (state=finished)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,757 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,757 | INFO     | log transfer has been attempted: DONE
[2026-02-07 08:59:32] 2026-02-07 13:58:36,757 | INFO     | job 6998621229 has finished - writing final server update
[2026-02-07 08:59:32] 2026-02-07 13:58:36,757 | INFO     | total number of processed events: 400 (read)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,800 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6998621229/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,801 | INFO     | extracted standard info from prmon json
[2026-02-07 08:59:32] 2026-02-07 13:58:36,801 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 08:59:32] 2026-02-07 13:58:36,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 08:59:32] 2026-02-07 13:58:36,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 08:59:32] 2026-02-07 13:58:36,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 08:59:32] 2026-02-07 13:58:36,802 | INFO     | fitting pss+swap vs Time
[2026-02-07 08:59:32] 2026-02-07 13:58:36,806 | INFO     | sum of square deviations: 158729203.55000016
[2026-02-07 08:59:32] 2026-02-07 13:58:36,806 | INFO     | sum of deviations: -4927363323.424998
[2026-02-07 08:59:32] 2026-02-07 13:58:36,806 | INFO     | mean x: 1770470167.575
[2026-02-07 08:59:32] 2026-02-07 13:58:36,806 | INFO     | mean y: 2563258.4875
[2026-02-07 08:59:32] 2026-02-07 13:58:36,806 | INFO     | intersect: 54962517531.67302
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | chi2: 0.037846170838839475
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | current memory leak: -31.04 B/s (using 80 data points, chi2=0.04)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | could have reported an average CPU frequency of 3779 MHz (6 samples)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | ..............................
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . Timing measurements:
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . get job = 0 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . initial setup = 40 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . payload setup = 50 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . stage-in = 0 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . payload execution = 5293 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . stage-out = 2 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | . log creation = 0 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,807 | INFO     | ..............................
[2026-02-07 08:59:32] 2026-02-07 13:58:36,903 | INFO     | 
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | job summary report
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | --------------------------------------------------
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | PanDA job id: 6998621229
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | task id: 48318034
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | errors: (none)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 08:59:32] 2026-02-07 13:58:36,905 | INFO     | pilot state: finished 
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | transexitcode: 0
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | exeerrorcode: 0
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | exeerrordiag: 
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | exitcode: 0
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | exitmsg: OK
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | cpuconsumptiontime: 25282 s
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | nevents: 400
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | neventsw: 0
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | pid: 2195350
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | pgrp: 2195350
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | corecount: 8
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | event service: False
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | sizes: {0: 2282618, 1: 2283079, 12: 2283079, 5345: 2309610, 5347: 2318608, 5348: 2318692, 5349: 2319014}
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | --------------------------------------------------
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | 
[2026-02-07 08:59:32] 2026-02-07 13:58:36,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,984 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,984 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 08:59:32] 2026-02-07 13:58:36,984 | INFO     | job 6998621229 has completed (purged errors)
[2026-02-07 08:59:32] 2026-02-07 13:58:36,984 | INFO     | overall cleanup function is called
[2026-02-07 08:59:32] 2026-02-07 13:58:38,008 | INFO     | --- collectZombieJob: --- 10, [2195350]
[2026-02-07 08:59:32] 2026-02-07 13:58:38,008 | INFO     | zombie collector waiting for pid 2195350
[2026-02-07 08:59:32] 2026-02-07 13:58:38,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 08:59:32] 2026-02-07 13:58:38,009 | INFO     | collected zombie processes
[2026-02-07 08:59:32] 2026-02-07 13:58:38,009 | INFO     | will attempt to kill all subprocesses of pid=2195350
[2026-02-07 08:59:32] 2026-02-07 13:58:39,759 | INFO     | process IDs to be killed: [2195350] (in reverse order)
[2026-02-07 08:59:32] 2026-02-07 13:58:40,065 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 08:59:32] 2026-02-07 13:58:40,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 08:59:32] 2026-02-07 13:58:40,158 | INFO     | did not find any defunct processes belonging to 2195350
[2026-02-07 08:59:32] 2026-02-07 13:58:40,212 | INFO     | did not find any defunct processes belonging to 2195350
[2026-02-07 08:59:32] 2026-02-07 13:58:40,213 | INFO     | ready for new job
[2026-02-07 08:59:32] 2026-02-07 13:58:40,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 08:59:32] 2026-02-07 13:58:40,218 | INFO     | **************************************
[2026-02-07 08:59:32] 2026-02-07 13:58:40,218 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 08:59:32] 2026-02-07 13:58:40,218 | INFO     | **************************************
[2026-02-07 08:59:32] 2026-02-07 13:58:40,218 | INFO     | 
[2026-02-07 08:59:32] 2026-02-07 13:58:40,226 | INFO     | architecture information:
[2026-02-07 08:59:32] 2026-02-07 13:58:40,227 | INFO     | executing command: cat /etc/os-release
[2026-02-07 08:59:32] 2026-02-07 13:58:40,293 | INFO     | cat /etc/os-release:
[2026-02-07 08:59:32] NAME="CentOS Linux"
[2026-02-07 08:59:32] VERSION="7 (Core)"
[2026-02-07 08:59:32] ID="centos"
[2026-02-07 08:59:32] ID_LIKE="rhel fedora"
[2026-02-07 08:59:32] VERSION_ID="7"
[2026-02-07 08:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 08:59:32] ANSI_COLOR="0;31"
[2026-02-07 08:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 08:59:32] HOME_URL="https://www.centos.org/"
[2026-02-07 08:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 08:59:32] 
[2026-02-07 08:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 08:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 08:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 08:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 08:59:32] 
[2026-02-07 08:59:32] 2026-02-07 13:58:40,294 | INFO     | **************************************
[2026-02-07 08:59:32] 2026-02-07 13:58:40,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 08:59:32] 2026-02-07 13:58:40,834 | INFO     | sufficient remaining disk space (164685152256 B)
[2026-02-07 08:59:32] 2026-02-07 13:58:40,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 08:59:32] 2026-02-07 13:58:40,835 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 08:59:32] 2026-02-07 13:58:40,835 | INFO     | update_server=False
[2026-02-07 08:59:32] 2026-02-07 13:58:40,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 08:59:32] 2026-02-07 13:58:40,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 08:59:32] 2026-02-07 13:58:41,127 | INFO     | all payload control threads have been joined
[2026-02-07 08:59:32] 2026-02-07 13:58:41,293 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 08:59:32] 2026-02-07 13:58:41,293 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 08:59:32] 2026-02-07 13:58:41,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:59:32] 2026-02-07 13:58:41,294 | INFO     | will abort loop
[2026-02-07 08:59:32] 2026-02-07 13:58:41,840 | INFO     | [job] retrieve thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:41,901 | INFO     | all data control threads have been joined
[2026-02-07 08:59:32] 2026-02-07 13:58:41,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:59:32] 2026-02-07 13:58:41,946 | INFO     | [data] copytool_in thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 08:59:32] 2026-02-07 13:58:42,035 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,133 | INFO     | [payload] control thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,232 | INFO     | all job control threads have been joined
[2026-02-07 08:59:32] 2026-02-07 13:58:42,299 | INFO     | [job] job monitor thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,358 | INFO     | [job] validate thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,397 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,530 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,683 | INFO     | [payload] failed_post thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,843 | INFO     | [data] copytool_out thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,907 | INFO     | [data] control thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:42,926 | INFO     | [job] queue monitor thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:43,128 | INFO     | [payload] validate_post thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:43,240 | INFO     | [job] control thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:46,054 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:58:51,393 | INFO     | job.realtimelogging is not enabled
[2026-02-07 08:59:32] 2026-02-07 13:58:52,399 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 08:59:32] 2026-02-07 13:59:12,517 | INFO     | PID=2180232 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 08:59:32] 2026-02-07 13:59:12,517 | INFO     | .. there are 44 such processes running
[2026-02-07 08:59:32] 2026-02-07 13:59:12,518 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 08:59:32] 2026-02-07 13:59:12,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 08:59:32] 2026-02-07 13:59:12,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 08:59:32] 2026-02-07 13:59:23,975 | INFO     | [monitor] cgroup control has ended
[2026-02-07 08:59:32] 2026-02-07 13:59:24,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887305574208)>', '<ExcThread(monitor, started 139886740891392)>']
[2026-02-07 08:59:32] 2026-02-07 13:59:25,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 08:59:32] 2026-02-07 13:59:25,596 | INFO     | [monitor] control thread has ended
[2026-02-07 08:59:32] 2026-02-07 13:59:29,702 | INFO     | all workflow threads have been joined
[2026-02-07 08:59:32] 2026-02-07 13:59:29,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 08:59:32] 2026-02-07 13:59:29,703 | INFO     | traces error code: 0
[2026-02-07 08:59:32] 2026-02-07 13:59:29,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 08:59:32] 2026-02-07 13:59:30,313 [wrapper] ==== pilot stdout END ====
[2026-02-07 08:59:32] 2026-02-07 13:59:30,335 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 08:59:32] 2026-02-07 13:59:30,351 [wrapper] pilotpid: 2180232
[2026-02-07 08:59:32] 2026-02-07 13:59:30,380 [wrapper] Pilot exit status: 0
[2026-02-07 08:59:32] 2026-02-07 13:59:30,538 [wrapper] pandaids: 6998621229
[2026-02-07 08:59:32] 2026-02-07 13:59:31,168 [wrapper] cleanup supervisor_pilot 3015044 2180233
[2026-02-07 08:59:32] 2026-02-07 13:59:31,194 [wrapper] Test setup, not cleaning
[2026-02-07 08:59:32] 2026-02-07 13:59:31,220 [wrapper] apfmon messages muted
[2026-02-07 08:59:32] 2026-02-07 13:59:31,265 [wrapper] ==== wrapper stdout END ====
[2026-02-07 08:59:32] 2026-02-07 13:59:31,306 [wrapper] ==== wrapper stderr END ====
[2026-02-07 08:59:32]  *** Error codes and diagnostics ***
[2026-02-07 08:59:32]     "exeErrorCode": 0,
[2026-02-07 08:59:32]     "exeErrorDiag": "",
[2026-02-07 08:59:32]     "pilotErrorCode": 0,
[2026-02-07 08:59:32]     "pilotErrorDiag": "",
[2026-02-07 08:59:32]  *** Listing of results directory ***
[2026-02-07 08:59:32] total 676708
[2026-02-07 08:59:32] -rwx------. 1 boincer umatlas     36322 Feb  6 22:50 runpilot2-wrapper.sh
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 22:53 pilot3.tar.gz
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 22:53 queuedata.json
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas       100 Feb  7 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 08:59:32] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 07:27 run_atlas
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas       105 Feb  7 07:27 job.xml
[2026-02-07 08:59:32] -rw-r--r--. 2 boincer umatlas 498481853 Feb  7 07:27 EVNT.48318032._000197.pool.root.1
[2026-02-07 08:59:32] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 07:27 start_atlas.sh
[2026-02-07 08:59:32] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 07:27 shared
[2026-02-07 08:59:32] -rw-r--r--. 2 boincer umatlas    597964 Feb  7 07:27 input.tar.gz
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas         0 Feb  7 07:27 boinc_lockfile
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas      2536 Feb  7 07:27 pandaJob.out
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas        57 Feb  7 07:27 setup.sh.local
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas   1009494 Feb  7 07:28 agis_schedconf.cvmfs.json
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas   1513088 Feb  7 07:28 agis_ddmendpoints.agis.ALL.json
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas       432 Feb  7 07:29 workernode_map.json
[2026-02-07 08:59:32] drwx------. 5 boincer umatlas      4096 Feb  7 07:29 pilot3
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas      7184 Feb  7 08:55 init_data.xml
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas 188430304 Feb  7 08:57 HITS.48318034._010321.pool.root.1
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas       530 Feb  7 08:57 boinc_task_state.xml
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas        95 Feb  7 08:58 pilot_heartbeat.json
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas      1063 Feb  7 08:58 memory_monitor_summary.json
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas    322272 Feb  7 08:58 log.48318034._010321.job.log.tgz.1
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas      6361 Feb  7 08:58 heartbeat.json
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 08:59 boinc_mmap_file
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas      5079 Feb  7 08:59 pilotlog.txt
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas        27 Feb  7 08:59 wrapper_checkpoint.txt
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas    724978 Feb  7 08:59 log.48318034._010321.job.log.1
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas       357 Feb  7 08:59 output.list
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas       620 Feb  7 08:59 runtime_log
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas   1064960 Feb  7 08:59 result.tar.gz
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas      9341 Feb  7 08:59 runtime_log.err
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas       657 Feb  7 08:59 KBkKDmTWo88n9Rq4apOajLDm4fhM0noT9bVooX4SDmOHaKDmSA8gem.diag
[2026-02-07 08:59:32] -rw-r--r--. 1 boincer umatlas     22524 Feb  7 08:59 stderr.txt
[2026-02-07 08:59:32] HITS file was successfully produced:
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas 188430304 Feb  7 08:57 shared/HITS.pool.root.1
[2026-02-07 08:59:32]  *** Contents of shared directory: ***
[2026-02-07 08:59:32] total 672464
[2026-02-07 08:59:32] -rw-r--r--. 2 boincer umatlas 498481853 Feb  7 07:27 ATLAS.root_0
[2026-02-07 08:59:32] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 07:27 start_atlas.sh
[2026-02-07 08:59:32] -rw-r--r--. 2 boincer umatlas    597964 Feb  7 07:27 input.tar.gz
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas 188430304 Feb  7 08:57 HITS.pool.root.1
[2026-02-07 08:59:32] -rw-------. 1 boincer umatlas   1064960 Feb  7 08:59 result.tar.gz
08:59:55 (2166335): run_atlas exited; CPU time 25467.241770
08:59:55 (2166335): called boinc_finish(0)

</stderr_txt>
]]>

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