Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:42:47 (698048): wrapper (7.7.26015): starting
02:42:47 (698048): wrapper: running run_atlas (--nthreads 3)
[2026-02-08 02:42:47] Arguments: --nthreads 3
[2026-02-08 02:42:47] Threads: 3
[2026-02-08 02:42:47] Checking for CVMFS
[2026-02-08 02:42:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 02:42:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 02:42:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 02:42:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 02:42:49] 2.9.2.0 4046500 2621 80044 156002 3 50 27363940 36864000 0 130560 0 1084160 99.983 98954 19517 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-08 02:42:49] CVMFS is ok
[2026-02-08 02:42:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 02:42:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 02:42:49] Further information can be found at the LHC@home message board.
[2026-02-08 02:42:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 02:42:49] Checking for apptainer binary...
[2026-02-08 02:42:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 02:42:49] Running /usr/bin/apptainer --version
[2026-02-08 02:42:49] apptainer version 1.4.1-1.1
[2026-02-08 02:42:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 02:42:49] legendA163
[2026-02-08 02:42:49] apptainer works
[2026-02-08 02:42:49] Set ATHENA_PROC_NUMBER=3
[2026-02-08 02:42:49] Set ATHENA_CORE_NUMBER=3
[2026-02-08 02:42:49] Starting ATLAS job with PandaID=7000143932
[2026-02-08 02:42:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 04:10:12]  *** The last 200 lines of the pilot log: ***
[2026-02-08 04:10:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-08 04:10:12]  is_altstaged=None
[2026-02-08 04:10:12]  is_tar=False
[2026-02-08 04:10:12]  lfn=log.48466714._000931.job.log.tgz.1
[2026-02-08 04:10:12]  mtime=0
[2026-02-08 04:10:12]  protocol_id=None
[2026-02-08 04:10:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-08 04:10:12]  replicas=None
[2026-02-08 04:10:12]  scope=mc23_13p6TeV
[2026-02-08 04:10:12]  status=None
[2026-02-08 04:10:12]  status_code=0
[2026-02-08 04:10:12]  storage_token=
[2026-02-08 04:10:12]  surl=/local/data/boinc/slots/0/PanDA_Pilot-7000143932/log.48466714._000931.job.log.tgz.1
[2026-02-08 04:10:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/46/log.48466714._000931.job.log.tgz.1
[2026-02-08 04:10:12]  workdir=None
[2026-02-08 04:10:12] ]
[2026-02-08 04:10:12] 2026-02-08 03:09:27,167 | INFO     | transferring file log.48466714._000931.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-7000143932/log.48466714._000931.job.log.tgz.1 to /local/data/boinc/
[2026-02-08 04:10:12] 2026-02-08 03:09:27,167 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-7000143932/log.48466714._000931.job.log.tgz.1 /local/data/boinc/slots/0/log.48466714._0009
[2026-02-08 04:10:12] 2026-02-08 03:09:27,181 | INFO     | adding to output.list: log.48466714._000931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/46/log.48466714._000931.job.log.tg
[2026-02-08 04:10:12] 2026-02-08 03:09:27,182 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-08 04:10:12] 2026-02-08 03:09:27,182 | INFO     | summary of transferred files:
[2026-02-08 04:10:12] 2026-02-08 03:09:27,182 | INFO     |  -- lfn=log.48466714._000931.job.log.tgz.1, status_code=0, status=transferred
[2026-02-08 04:10:12] 2026-02-08 03:09:27,182 | INFO     | stage-out finished correctly
[2026-02-08 04:10:12] 2026-02-08 03:09:28,678 | INFO     | time since job start (5188s) is within the limit (349056.0s)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-08 04:10:12] 2026-02-08 03:09:29,495 | INFO     | job 7000143932 has state=finished
[2026-02-08 04:10:12] 2026-02-08 03:09:29,495 | INFO     | preparing for final server update for job 7000143932 in state='finished'
[2026-02-08 04:10:12] 2026-02-08 03:09:29,495 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7000143932/jobReport.json
[2026-02-08 04:10:12] 2026-02-08 03:09:29,496 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-08 04:10:12] 2026-02-08 03:09:29,497 | INFO     | this job has now completed (state=finished)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,497 | INFO     | log transfer has been attempted: DONE
[2026-02-08 04:10:12] 2026-02-08 03:09:29,497 | INFO     | job 7000143932 has finished - writing final server update
[2026-02-08 04:10:12] 2026-02-08 03:09:29,497 | INFO     | total number of processed events: 400 (read)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,498 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7000143932/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,498 | INFO     | extracted standard info from prmon json
[2026-02-08 04:10:12] 2026-02-08 03:09:29,498 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 04:10:12] 2026-02-08 03:09:29,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 04:10:12] 2026-02-08 03:09:29,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 04:10:12] 2026-02-08 03:09:29,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | fitting pss+swap vs Time
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | sum of square deviations: 147126479.5
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | sum of deviations: -16114199840.5
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | mean x: 1770517650.5
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | mean y: 2480904.423076923
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | intersect: 193920498505.66348
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | chi2: 0.15920545658574192
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | current memory leak: -109.53 B/s (using 78 data points, chi2=0.16)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | could have reported an average CPU frequency of 3683 MHz (6 samples)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | ..............................
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | . Timing measurements:
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | . get job = 0 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,499 | INFO     | . initial setup = 3 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,500 | INFO     | . payload setup = 3 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,500 | INFO     | . stage-in = 0 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,500 | INFO     | . payload execution = 5169 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,500 | INFO     | . stage-out = 0 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,500 | INFO     | . log creation = 0 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,500 | INFO     | ..............................
[2026-02-08 04:10:12] 2026-02-08 03:09:29,525 | INFO     | 
[2026-02-08 04:10:12] 2026-02-08 03:09:29,525 | INFO     | job summary report
[2026-02-08 04:10:12] 2026-02-08 03:09:29,525 | INFO     | --------------------------------------------------
[2026-02-08 04:10:12] 2026-02-08 03:09:29,525 | INFO     | PanDA job id: 7000143932
[2026-02-08 04:10:12] 2026-02-08 03:09:29,525 | INFO     | task id: 48466714
[2026-02-08 04:10:12] 2026-02-08 03:09:29,525 | INFO     | errors: (none)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | pilot state: finished 
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | transexitcode: 0
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | exeerrorcode: 0
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | exeerrordiag: 
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | exitcode: 0
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | exitmsg: OK
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | cpuconsumptiontime: 14841 s
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | nevents: 400
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | neventsw: 0
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | pid: 706539
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | pgrp: 706539
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | corecount: 3
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | event service: False
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | sizes: {0: 2283004, 11: 2283004, 5176: 2318581, 5179: 2318775}
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | --------------------------------------------------
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | 
[2026-02-08 04:10:12] 2026-02-08 03:09:29,526 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | job 7000143932 has completed (purged errors)
[2026-02-08 04:10:12] 2026-02-08 03:09:29,542 | INFO     | overall cleanup function is called
[2026-02-08 04:10:12] 2026-02-08 03:09:30,549 | INFO     | --- collectZombieJob: --- 10, [706539]
[2026-02-08 04:10:12] 2026-02-08 03:09:30,549 | INFO     | zombie collector waiting for pid 706539
[2026-02-08 04:10:12] 2026-02-08 03:09:30,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 04:10:12] 2026-02-08 03:09:30,549 | INFO     | collected zombie processes
[2026-02-08 04:10:12] 2026-02-08 03:09:30,549 | INFO     | will attempt to kill all subprocesses of pid=706539
[2026-02-08 04:10:12] 2026-02-08 03:09:30,604 | INFO     | process IDs to be killed: [706539] (in reverse order)
[2026-02-08 04:10:12] 2026-02-08 03:09:30,634 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 04:10:12] 2026-02-08 03:09:30,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 04:10:12] 2026-02-08 03:09:30,636 | INFO     | did not find any defunct processes belonging to 706539
[2026-02-08 04:10:12] 2026-02-08 03:09:30,637 | INFO     | did not find any defunct processes belonging to 706539
[2026-02-08 04:10:12] 2026-02-08 03:09:30,637 | INFO     | ready for new job
[2026-02-08 04:10:12] 2026-02-08 03:09:30,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 04:10:12] 2026-02-08 03:09:30,638 | INFO     | **************************************
[2026-02-08 04:10:12] 2026-02-08 03:09:30,638 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 04:10:12] 2026-02-08 03:09:30,638 | INFO     | **************************************
[2026-02-08 04:10:12] 2026-02-08 03:09:30,638 | INFO     | 
[2026-02-08 04:10:12] 2026-02-08 03:09:30,639 | INFO     | architecture information:
[2026-02-08 04:10:12] 2026-02-08 03:09:30,639 | INFO     | executing command: cat /etc/os-release
[2026-02-08 04:10:12] 2026-02-08 03:09:30,648 | INFO     | cat /etc/os-release:
[2026-02-08 04:10:12] NAME="CentOS Linux"
[2026-02-08 04:10:12] VERSION="7 (Core)"
[2026-02-08 04:10:12] ID="centos"
[2026-02-08 04:10:12] ID_LIKE="rhel fedora"
[2026-02-08 04:10:12] VERSION_ID="7"
[2026-02-08 04:10:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 04:10:12] ANSI_COLOR="0;31"
[2026-02-08 04:10:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 04:10:12] HOME_URL="https://www.centos.org/"
[2026-02-08 04:10:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 04:10:12] 
[2026-02-08 04:10:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 04:10:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 04:10:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 04:10:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 04:10:12] 
[2026-02-08 04:10:12] 2026-02-08 03:09:30,648 | INFO     | **************************************
[2026-02-08 04:10:12] 2026-02-08 03:09:31,152 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 04:10:12] 2026-02-08 03:09:31,165 | INFO     | sufficient remaining disk space (374020767744 B)
[2026-02-08 04:10:12] 2026-02-08 03:09:31,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 04:10:12] 2026-02-08 03:09:31,165 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 04:10:12] 2026-02-08 03:09:31,165 | INFO     | update_server=False
[2026-02-08 04:10:12] 2026-02-08 03:09:31,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 04:10:12] 2026-02-08 03:09:31,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 04:10:12] 2026-02-08 03:09:31,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 04:10:12] 2026-02-08 03:09:31,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 04:10:12] 2026-02-08 03:09:31,572 | INFO     | all data control threads have been joined
[2026-02-08 04:10:12] 2026-02-08 03:09:31,645 | INFO     | all payload control threads have been joined
[2026-02-08 04:10:12] 2026-02-08 03:09:31,977 | INFO     | all job control threads have been joined
[2026-02-08 04:10:12] 2026-02-08 03:09:32,169 | INFO     | [job] retrieve thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,171 | INFO     | [job] queue monitor thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,382 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,578 | INFO     | [data] control thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,651 | INFO     | [payload] control thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,679 | INFO     | [job] validate thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,711 | INFO     | [payload] validate_post thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,736 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,790 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,823 | WARNING  | process 706539 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 04:10:12] 2026-02-08 03:09:32,860 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 04:10:12] 2026-02-08 03:09:32,905 | INFO     | [data] copytool_in thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:32,908 | INFO     | number of running child processes to parent process 706539: 1
[2026-02-08 04:10:12] 2026-02-08 03:09:32,908 | INFO     | maximum number of monitored processes: 6
[2026-02-08 04:10:12] 2026-02-08 03:09:32,908 | INFO     | aborting job monitoring since job object (job id=7000143932) has expired
[2026-02-08 04:10:12] 2026-02-08 03:09:32,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 04:10:12] 2026-02-08 03:09:32,908 | INFO     | will abort loop
[2026-02-08 04:10:12] 2026-02-08 03:09:32,982 | INFO     | [job] control thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:33,064 | INFO     | [payload] failed_post thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:33,172 | INFO     | [data] copytool_out thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:33,914 | INFO     | [job] job monitor thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:35,169 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:09:41,687 | INFO     | job.realtimelogging is not enabled
[2026-02-08 04:10:12] 2026-02-08 03:09:42,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 04:10:12] 2026-02-08 03:10:00,748 | INFO     | 5194s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-08 04:10:12] 2026-02-08 03:10:01,824 | INFO     | PID=702103 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-08 04:10:12] 2026-02-08 03:10:01,824 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 04:10:12] 2026-02-08 03:10:01,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 04:10:12] 2026-02-08 03:10:01,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 04:10:12] 2026-02-08 03:10:05,687 | INFO     | [monitor] cgroup control has ended
[2026-02-08 04:10:12] 2026-02-08 03:10:07,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121682429760)>', '<ExcThread(monitor, started 140120724322048)>']
[2026-02-08 04:10:12] 2026-02-08 03:10:07,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 04:10:12] 2026-02-08 03:10:07,857 | INFO     | [monitor] control thread has ended
[2026-02-08 04:10:12] 2026-02-08 03:10:12,789 | INFO     | all workflow threads have been joined
[2026-02-08 04:10:12] 2026-02-08 03:10:12,789 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 04:10:12] 2026-02-08 03:10:12,789 | INFO     | traces error code: 0
[2026-02-08 04:10:12] 2026-02-08 03:10:12,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 04:10:12] 2026-02-08 03:10:12,838 [wrapper] ==== pilot stdout END ====
[2026-02-08 04:10:12] 2026-02-08 03:10:12,841 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 04:10:12] 2026-02-08 03:10:12,843 [wrapper] pilotpid: 702103
[2026-02-08 04:10:12] 2026-02-08 03:10:12,845 [wrapper] Pilot exit status: 0
[2026-02-08 04:10:12] 2026-02-08 03:10:12,853 [wrapper] pandaids: 7000143932
[2026-02-08 04:10:12] 2026-02-08 03:10:12,873 [wrapper] cleanup supervisor_pilot  715731 702104
[2026-02-08 04:10:12] 2026-02-08 03:10:12,876 [wrapper] Test setup, not cleaning
[2026-02-08 04:10:12] 2026-02-08 03:10:12,878 [wrapper] apfmon messages muted
[2026-02-08 04:10:12] 2026-02-08 03:10:12,880 [wrapper] ==== wrapper stdout END ====
[2026-02-08 04:10:12] 2026-02-08 03:10:12,883 [wrapper] ==== wrapper stderr END ====
[2026-02-08 04:10:12]  *** Error codes and diagnostics ***
[2026-02-08 04:10:12]     "exeErrorCode": 0,
[2026-02-08 04:10:12]     "exeErrorDiag": "",
[2026-02-08 04:10:12]     "pilotErrorCode": 0,
[2026-02-08 04:10:12]     "pilotErrorDiag": "",
[2026-02-08 04:10:12]  *** Listing of results directory ***
[2026-02-08 04:10:12] total 725668
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc    584627 Feb  7 06:41 pilot3.tar.gz
[2026-02-08 04:10:12] -rwx------ 1 boinc boinc     36322 Feb  7 06:42 runpilot2-wrapper.sh
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc      5111 Feb  7 06:43 queuedata.json
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc       100 Feb  8 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 04:10:12] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 02:42 run_atlas
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc       105 Feb  8 02:42 job.xml
[2026-02-08 04:10:12] -rw-r--r-- 2 boinc boinc 535514955 Feb  8 02:42 EVNT.48466711._000019.pool.root.1
[2026-02-08 04:10:12] -rw-r--r-- 2 boinc boinc    597942 Feb  8 02:42 input.tar.gz
[2026-02-08 04:10:12] -rw-r--r-- 2 boinc boinc     15845 Feb  8 02:42 start_atlas.sh
[2026-02-08 04:10:12] drwxrwx--x 2 boinc boinc      4096 Feb  8 02:42 shared
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc         0 Feb  8 02:42 boinc_setup_complete
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc      6449 Feb  8 02:42 init_data.xml
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc         0 Feb  8 02:42 boinc_lockfile
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc      2496 Feb  8 02:42 pandaJob.out
[2026-02-08 04:10:12] -rw------- 1 boinc boinc   1009510 Feb  8 02:42 agis_schedconf.cvmfs.json
[2026-02-08 04:10:12] -rw------- 1 boinc boinc   1513088 Feb  8 02:42 agis_ddmendpoints.agis.ALL.json
[2026-02-08 04:10:12] -rw------- 1 boinc boinc       427 Feb  8 02:42 workernode_map.json
[2026-02-08 04:10:12] drwx------ 5 boinc boinc      4096 Feb  8 02:43 pilot3
[2026-02-08 04:10:12] -rw------- 1 boinc boinc 201556895 Feb  8 04:09 HITS.48466714._000931.pool.root.1
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc       530 Feb  8 04:09 boinc_task_state.xml
[2026-02-08 04:10:12] -rw------- 1 boinc boinc      1014 Feb  8 04:09 memory_monitor_summary.json
[2026-02-08 04:10:12] -rw------- 1 boinc boinc    277454 Feb  8 04:09 log.48466714._000931.job.log.tgz.1
[2026-02-08 04:10:12] -rw------- 1 boinc boinc        95 Feb  8 04:09 pilot_heartbeat.json
[2026-02-08 04:10:12] -rw------- 1 boinc boinc      6306 Feb  8 04:09 heartbeat.json
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc        27 Feb  8 04:09 wrapper_checkpoint.txt
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc      8192 Feb  8 04:09 boinc_mmap_file
[2026-02-08 04:10:12] -rw------- 1 boinc boinc      5456 Feb  8 04:10 pilotlog.txt
[2026-02-08 04:10:12] -rw------- 1 boinc boinc    755651 Feb  8 04:10 log.48466714._000931.job.log.1
[2026-02-08 04:10:12] -rw------- 1 boinc boinc       357 Feb  8 04:10 output.list
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc       620 Feb  8 04:10 runtime_log
[2026-02-08 04:10:12] -rw------- 1 boinc boinc   1054720 Feb  8 04:10 result.tar.gz
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc      8916 Feb  8 04:10 runtime_log.err
[2026-02-08 04:10:12] -rw------- 1 boinc boinc       661 Feb  8 04:10 TVEMDmgGq88n9Rq4apOajLDm4fhM0noT9bVooX4SDmHRaKDmwL2uOo.diag
[2026-02-08 04:10:12] -rw-r--r-- 1 boinc boinc     21413 Feb  8 04:10 stderr.txt
[2026-02-08 04:10:12] HITS file was successfully produced:
[2026-02-08 04:10:12] -rw------- 1 boinc boinc 201556895 Feb  8 04:09 shared/HITS.pool.root.1
[2026-02-08 04:10:12]  *** Contents of shared directory: ***
[2026-02-08 04:10:12] total 721440
[2026-02-08 04:10:12] -rw-r--r-- 2 boinc boinc 535514955 Feb  8 02:42 ATLAS.root_0
[2026-02-08 04:10:12] -rw-r--r-- 2 boinc boinc    597942 Feb  8 02:42 input.tar.gz
[2026-02-08 04:10:12] -rw-r--r-- 2 boinc boinc     15845 Feb  8 02:42 start_atlas.sh
[2026-02-08 04:10:12] -rw------- 1 boinc boinc 201556895 Feb  8 04:09 HITS.pool.root.1
[2026-02-08 04:10:12] -rw------- 1 boinc boinc   1054720 Feb  8 04:10 result.tar.gz
04:10:14 (698048): run_atlas exited; CPU time 14871.431078
04:10:14 (698048): called boinc_finish(0)

</stderr_txt>
]]>

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