Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
22:57:17 (3717282): wrapper (7.7.26015): starting
22:57:17 (3717282): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 22:57:17] Arguments: --nthreads 4
[2026-02-07 22:57:17] Threads: 4
[2026-02-07 22:57:17] Checking for CVMFS
[2026-02-07 22:57:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 22:57:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 22:57:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 22:57:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 22:57:20] 2.11.3.0 3588909 969 69024 156007 0 50 2146364 4194305 0 130560 0 289996 99.969 35194 474 http://s1unl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.59.5:3128 1
[2026-02-07 22:57:20] CVMFS is ok
[2026-02-07 22:57:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 22:57:20] Checking for apptainer binary...
[2026-02-07 22:57:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 22:57:20] Running /usr/bin/apptainer --version
[2026-02-07 22:57:20] apptainer version 1.4.5-2.fc42
[2026-02-07 22:57:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 22:57:20] R7OwensSE
[2026-02-07 22:57:20] apptainer works
[2026-02-07 22:57:20] Set ATHENA_PROC_NUMBER=4
[2026-02-07 22:57:20] Set ATHENA_CORE_NUMBER=4
[2026-02-07 22:57:20] Starting ATLAS job with PandaID=7000143904
[2026-02-07 22:57:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 01:23:06]  *** The last 200 lines of the pilot log: ***
[2026-02-08 01:23:06] 2026-02-08 07:22:43,591 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,592 | INFO     | log transfer has been attempted: DONE
[2026-02-08 01:23:06] 2026-02-08 07:22:43,592 | INFO     | job 7000143904 has finished - writing final server update
[2026-02-08 01:23:06] 2026-02-08 07:22:43,592 | INFO     | total number of processed events: 400 (read)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,595 | INFO     | using path: /data/boinc/slots/7/PanDA_Pilot-7000143904/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,596 | INFO     | extracted standard info from prmon json
[2026-02-08 01:23:06] 2026-02-08 07:22:43,596 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 01:23:06] 2026-02-08 07:22:43,596 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 01:23:06] 2026-02-08 07:22:43,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 01:23:06] 2026-02-08 07:22:43,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 01:23:06] 2026-02-08 07:22:43,598 | INFO     | fitting pss+swap vs Time
[2026-02-08 01:23:06] 2026-02-08 07:22:43,599 | INFO     | sum of square deviations: 906703512.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,599 | INFO     | sum of deviations: -3777265789.999999
[2026-02-08 01:23:06] 2026-02-08 07:22:43,600 | INFO     | mean x: 1770531019.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,600 | INFO     | mean y: 2353058.5664335666
[2026-02-08 01:23:06] 2026-02-08 07:22:43,600 | INFO     | intersect: 7378266088.230024
[2026-02-08 01:23:06] 2026-02-08 07:22:43,600 | INFO     | chi2: 2.0678214549240566
[2026-02-08 01:23:06] 2026-02-08 07:22:43,600 | INFO     | sum of square deviations: 814878534.5
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | sum of deviations: 4449100544.500003
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | mean x: 1770530866.5
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | mean y: 2366332.586956522
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | intersect: -9664436152.316654
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | chi2: 1.4174974191714333
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | current chi2=1.4174974191714333 (change=31.44971893990273 %)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,601 | INFO     | sum of square deviations: 729472282.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,602 | INFO     | sum of deviations: 4264092942.999998
[2026-02-08 01:23:06] 2026-02-08 07:22:43,602 | INFO     | mean x: 1770530714.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,602 | INFO     | mean y: 2366002.097744361
[2026-02-08 01:23:06] 2026-02-08 07:22:43,602 | INFO     | intersect: -10347180799.36955
[2026-02-08 01:23:06] 2026-02-08 07:22:43,602 | INFO     | chi2: 1.4185353476650102
[2026-02-08 01:23:06] 2026-02-08 07:22:43,603 | INFO     | current chi2=1.4185353476650102 (change=-0.07322260199835605 %)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,603 | INFO     | right removable region: 132
[2026-02-08 01:23:06] 2026-02-08 07:22:43,603 | INFO     | sum of square deviations: 814878534.5
[2026-02-08 01:23:06] 2026-02-08 07:22:43,603 | INFO     | sum of deviations: -16553732686.999989
[2026-02-08 01:23:06] 2026-02-08 07:22:43,604 | INFO     | mean x: 1770531171.5
[2026-02-08 01:23:06] 2026-02-08 07:22:43,604 | INFO     | mean y: 2373613.3333333335
[2026-02-08 01:23:06] 2026-02-08 07:22:43,604 | INFO     | intersect: 35969574228.0796
[2026-02-08 01:23:06] 2026-02-08 07:22:43,604 | INFO     | chi2: 0.8262918082751769
[2026-02-08 01:23:06] 2026-02-08 07:22:43,604 | INFO     | current chi2=0.8262918082751769 (change=60.04046643835971 %)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,604 | INFO     | sum of square deviations: 729472282.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | sum of deviations: -8748020614.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | mean x: 1770531324.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | mean y: 2359662.5488721803
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | intersect: 21235030049.44743
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | chi2: 0.7350358361191719
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | current chi2=0.7350358361191719 (change=11.044036893757315 %)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | left removable region: 20
[2026-02-08 01:23:06] 2026-02-08 07:22:43,605 | INFO     | sum of square deviations: 435610028.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,606 | INFO     | sum of deviations: 1102149525.0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,606 | INFO     | mean x: 1770531293.5
[2026-02-08 01:23:06] 2026-02-08 07:22:43,606 | INFO     | mean y: 2369697.625
[2026-02-08 01:23:06] 2026-02-08 07:22:43,606 | INFO     | intersect: -4477302712.78301
[2026-02-08 01:23:06] 2026-02-08 07:22:43,606 | INFO     | chi2: 0.0008039861820786783
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | current memory leak: 2.53 B/s (using 112 data points, chi2=0.00)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | could have reported an average CPU frequency of 3394 MHz (8 samples)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | ..............................
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | . Timing measurements:
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | . get job = 0 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | . initial setup = 8 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | . payload setup = 6 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,607 | INFO     | . stage-in = 0 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,608 | INFO     | . payload execution = 8671 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,608 | INFO     | . stage-out = 0 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,608 | INFO     | . log creation = 0 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,608 | INFO     | ..............................
[2026-02-08 01:23:06] 2026-02-08 07:22:43,626 | INFO     | time since job start (8698s) is within the limit (349056.0s)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,744 | INFO     | 
[2026-02-08 01:23:06] 2026-02-08 07:22:43,744 | INFO     | job summary report
[2026-02-08 01:23:06] 2026-02-08 07:22:43,744 | INFO     | --------------------------------------------------
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | PanDA job id: 7000143904
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | task id: 48466714
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | errors: (none)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | pilot state: finished 
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | transexitcode: 0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | exeerrorcode: 0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | exeerrordiag: 
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | exitcode: 0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | exitmsg: OK
[2026-02-08 01:23:06] 2026-02-08 07:22:43,745 | INFO     | cpuconsumptiontime: 33380 s
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | nevents: 400
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | neventsw: 0
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | pid: 3725961
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | pgrp: 3725961
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | corecount: 4
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | event service: False
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | sizes: {0: 2282994, 11: 2282994, 8682: 2310915, 8684: 2319907, 8686: 2320151, 8687: 2320345}
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | --------------------------------------------------
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | 
[2026-02-08 01:23:06] 2026-02-08 07:22:43,746 | INFO     | executing command: ls -lF /data/boinc/slots/7
[2026-02-08 01:23:06] 2026-02-08 07:22:43,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,778 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 01:23:06] 2026-02-08 07:22:43,779 | INFO     | job 7000143904 has completed (purged errors)
[2026-02-08 01:23:06] 2026-02-08 07:22:43,780 | INFO     | overall cleanup function is called
[2026-02-08 01:23:06] 2026-02-08 07:22:44,788 | INFO     | --- collectZombieJob: --- 10, [3725961]
[2026-02-08 01:23:06] 2026-02-08 07:22:44,788 | INFO     | zombie collector waiting for pid 3725961
[2026-02-08 01:23:06] 2026-02-08 07:22:44,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 01:23:06] 2026-02-08 07:22:44,788 | INFO     | collected zombie processes
[2026-02-08 01:23:06] 2026-02-08 07:22:44,788 | INFO     | will attempt to kill all subprocesses of pid=3725961
[2026-02-08 01:23:06] 2026-02-08 07:22:44,890 | INFO     | process IDs to be killed: [3725961] (in reverse order)
[2026-02-08 01:23:06] 2026-02-08 07:22:44,987 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 01:23:06] 2026-02-08 07:22:44,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 01:23:06] 2026-02-08 07:22:44,991 | INFO     | did not find any defunct processes belonging to 3725961
[2026-02-08 01:23:06] 2026-02-08 07:22:44,995 | INFO     | did not find any defunct processes belonging to 3725961
[2026-02-08 01:23:06] 2026-02-08 07:22:44,996 | INFO     | ready for new job
[2026-02-08 01:23:06] 2026-02-08 07:22:44,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 01:23:06] 2026-02-08 07:22:44,998 | INFO     | **************************************
[2026-02-08 01:23:06] 2026-02-08 07:22:44,998 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 01:23:06] 2026-02-08 07:22:44,998 | INFO     | **************************************
[2026-02-08 01:23:06] 2026-02-08 07:22:44,998 | INFO     | 
[2026-02-08 01:23:06] 2026-02-08 07:22:44,999 | INFO     | architecture information:
[2026-02-08 01:23:06] 2026-02-08 07:22:45,001 | INFO     | executing command: cat /etc/os-release
[2026-02-08 01:23:06] 2026-02-08 07:22:45,025 | INFO     | cat /etc/os-release:
[2026-02-08 01:23:06] NAME="CentOS Linux"
[2026-02-08 01:23:06] VERSION="7 (Core)"
[2026-02-08 01:23:06] ID="centos"
[2026-02-08 01:23:06] ID_LIKE="rhel fedora"
[2026-02-08 01:23:06] VERSION_ID="7"
[2026-02-08 01:23:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 01:23:06] ANSI_COLOR="0;31"
[2026-02-08 01:23:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 01:23:06] HOME_URL="https://www.centos.org/"
[2026-02-08 01:23:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 01:23:06] 
[2026-02-08 01:23:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 01:23:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 01:23:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 01:23:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 01:23:06] 
[2026-02-08 01:23:06] 2026-02-08 07:22:45,026 | INFO     | **************************************
[2026-02-08 01:23:06] 2026-02-08 07:22:45,528 | INFO     | executing command: df -mP /data/boinc/slots/7
[2026-02-08 01:23:06] 2026-02-08 07:22:45,550 | INFO     | sufficient remaining disk space (408224268288 B)
[2026-02-08 01:23:06] 2026-02-08 07:22:45,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 01:23:06] 2026-02-08 07:22:45,551 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 01:23:06] 2026-02-08 07:22:45,551 | INFO     | update_server=False
[2026-02-08 01:23:06] 2026-02-08 07:22:45,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 01:23:06] 2026-02-08 07:22:45,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:23:06] 2026-02-08 07:22:45,552 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-08 01:23:06] 2026-02-08 07:22:45,552 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 01:23:06] 2026-02-08 07:22:45,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 01:23:06] 2026-02-08 07:22:45,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 01:23:06] 2026-02-08 07:22:45,591 | INFO     | all data control threads have been joined
[2026-02-08 01:23:06] 2026-02-08 07:22:46,092 | INFO     | all payload control threads have been joined
[2026-02-08 01:23:06] 2026-02-08 07:22:46,093 | INFO     | all job control threads have been joined
[2026-02-08 01:23:06] 2026-02-08 07:22:46,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 01:23:06] 2026-02-08 07:22:46,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 01:23:06] 2026-02-08 07:22:46,490 | INFO     | aborting loop
[2026-02-08 01:23:06] 2026-02-08 07:22:46,556 | INFO     | [job] queue monitor thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:46,557 | INFO     | [job] retrieve thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:46,597 | INFO     | [data] control thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:46,750 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:46,963 | INFO     | [data] copytool_in thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,037 | INFO     | [payload] failed_post thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,098 | INFO     | [payload] control thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,098 | INFO     | [job] control thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,252 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,494 | INFO     | [job] job monitor thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,803 | INFO     | [payload] validate_post thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,848 | INFO     | [job] validate thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:47,854 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:48,011 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:48,171 | INFO     | [data] copytool_out thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:48,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 01:23:06] 2026-02-08 07:22:52,986 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 01:23:06] 2026-02-08 07:22:59,246 | INFO     | [monitor] cgroup control has ended
[2026-02-08 01:23:06] 2026-02-08 07:23:01,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712886814528)>', '<ExcThread(monitor, started 140712230242048)>']
[2026-02-08 01:23:06] 2026-02-08 07:23:01,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 01:23:06] 2026-02-08 07:23:01,633 | INFO     | [monitor] control thread has ended
[2026-02-08 01:23:06] 2026-02-08 07:23:06,165 | INFO     | all workflow threads have been joined
[2026-02-08 01:23:06] 2026-02-08 07:23:06,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 01:23:06] 2026-02-08 07:23:06,166 | INFO     | traces error code: 0
[2026-02-08 01:23:06] 2026-02-08 07:23:06,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 01:23:06] 2026-02-08 07:23:06,318 [wrapper] ==== pilot stdout END ====
[2026-02-08 01:23:06] 2026-02-08 07:23:06,323 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 01:23:06] 2026-02-08 07:23:06,326 [wrapper] pilotpid: 3721449
[2026-02-08 01:23:06] 2026-02-08 07:23:06,328 [wrapper] Pilot exit status: 0
[2026-02-08 01:23:06] 2026-02-08 07:23:06,340 [wrapper] pandaids: 7000143904
[2026-02-08 01:23:06] 2026-02-08 07:23:06,379 [wrapper] cleanup supervisor_pilot 3735752 3721450
[2026-02-08 01:23:06] 2026-02-08 07:23:06,382 [wrapper] Test setup, not cleaning
[2026-02-08 01:23:06] 2026-02-08 07:23:06,385 [wrapper] apfmon messages muted
[2026-02-08 01:23:06] 2026-02-08 07:23:06,387 [wrapper] ==== wrapper stdout END ====
[2026-02-08 01:23:06] 2026-02-08 07:23:06,390 [wrapper] ==== wrapper stderr END ====
[2026-02-08 01:23:06]  *** Error codes and diagnostics ***
[2026-02-08 01:23:06]     "exeErrorCode": 0,
[2026-02-08 01:23:06]     "exeErrorDiag": "",
[2026-02-08 01:23:06]     "pilotErrorCode": 0,
[2026-02-08 01:23:06]     "pilotErrorDiag": "",
[2026-02-08 01:23:06]  *** Listing of results directory ***
[2026-02-08 01:23:06] total 720284
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc    602657 Feb  3 05:11 pilot3.tar.gz
[2026-02-08 01:23:06] -rwx------ 1 boinc boinc     36322 Feb  6 23:42 runpilot2-wrapper.sh
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc      5111 Feb  6 23:43 queuedata.json
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc       100 Feb  7 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 01:23:06] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 22:57 run_atlas
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc       105 Feb  7 22:57 job.xml
[2026-02-08 01:23:06] -rw-r--r-- 2 boinc boinc 535514955 Feb  7 22:57 EVNT.48466711._000019.pool.root.1
[2026-02-08 01:23:06] -rw-r--r-- 2 boinc boinc    616285 Feb  7 22:57 input.tar.gz
[2026-02-08 01:23:06] -rw-r--r-- 2 boinc boinc     15845 Feb  7 22:57 start_atlas.sh
[2026-02-08 01:23:06] drwxrwx--x 2 boinc boinc      4096 Feb  7 22:57 shared
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc         0 Feb  7 22:57 boinc_setup_complete
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc      9286 Feb  7 22:57 init_data.xml
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc         0 Feb  7 22:57 boinc_lockfile
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc      2494 Feb  7 22:57 pandaJob.out
[2026-02-08 01:23:06] -rw------- 1 boinc boinc   1009518 Feb  7 22:57 agis_schedconf.cvmfs.json
[2026-02-08 01:23:06] -rw------- 1 boinc boinc   1513088 Feb  7 22:57 agis_ddmendpoints.agis.ALL.json
[2026-02-08 01:23:06] -rw------- 1 boinc boinc       426 Feb  7 22:57 workernode_map.json
[2026-02-08 01:23:06] drwx------ 7 boinc boinc      4096 Feb  7 22:57 pilot3
[2026-02-08 01:23:06] -rw------- 1 boinc boinc        95 Feb  8 01:21 pilot_heartbeat.json
[2026-02-08 01:23:06] -rw------- 1 boinc boinc 194994108 Feb  8 01:22 HITS.48466714._000903.pool.root.1
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc       530 Feb  8 01:22 boinc_task_state.xml
[2026-02-08 01:23:06] -rw------- 1 boinc boinc      1015 Feb  8 01:22 memory_monitor_summary.json
[2026-02-08 01:23:06] -rw------- 1 boinc boinc    306643 Feb  8 01:22 log.48466714._000903.job.log.tgz.1
[2026-02-08 01:23:06] -rw------- 1 boinc boinc      6283 Feb  8 01:22 heartbeat.json
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc      8192 Feb  8 01:23 boinc_mmap_file
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc        27 Feb  8 01:23 wrapper_checkpoint.txt
[2026-02-08 01:23:06] -rw------- 1 boinc boinc      4546 Feb  8 01:23 pilotlog.txt
[2026-02-08 01:23:06] -rw------- 1 boinc boinc   1234062 Feb  8 01:23 log.48466714._000903.job.log.1
[2026-02-08 01:23:06] -rw------- 1 boinc boinc       357 Feb  8 01:23 output.list
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc       620 Feb  8 01:23 runtime_log
[2026-02-08 01:23:06] -rw------- 1 boinc boinc   1556480 Feb  8 01:23 result.tar.gz
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc      8729 Feb  8 01:23 runtime_log.err
[2026-02-08 01:23:06] -rw------- 1 boinc boinc       643 Feb  8 01:23 GSfLDmgGq88n9Rq4apOajLDm4fhM0noT9bVooX4SDm2QaKDmnOn1Nm.diag
[2026-02-08 01:23:06] -rw-r--r-- 1 boinc boinc     20643 Feb  8 01:23 stderr.txt
[2026-02-08 01:23:06] HITS file was successfully produced:
[2026-02-08 01:23:06] -rw------- 1 boinc boinc 194994108 Feb  8 01:22 shared/HITS.pool.root.1
[2026-02-08 01:23:06]  *** Contents of shared directory: ***
[2026-02-08 01:23:06] total 715536
[2026-02-08 01:23:06] -rw-r--r-- 2 boinc boinc 535514955 Feb  7 22:57 ATLAS.root_0
[2026-02-08 01:23:06] -rw-r--r-- 2 boinc boinc    616285 Feb  7 22:57 input.tar.gz
[2026-02-08 01:23:06] -rw-r--r-- 2 boinc boinc     15845 Feb  7 22:57 start_atlas.sh
[2026-02-08 01:23:06] -rw------- 1 boinc boinc 194994108 Feb  8 01:22 HITS.pool.root.1
[2026-02-08 01:23:06] -rw------- 1 boinc boinc   1556480 Feb  8 01:23 result.tar.gz
01:23:08 (3717282): run_atlas exited; CPU time 33470.393581
01:23:08 (3717282): called boinc_finish(0)

</stderr_txt>
]]>

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