Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:37 (4159902): wrapper (7.7.26015): starting
23:27:37 (4159902): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 23:27:37] Arguments: --nthreads 4
[2026-02-07 23:27:37] Threads: 4
[2026-02-07 23:27:37] Checking for CVMFS
[2026-02-07 23:27:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 23:27:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 23:27:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 23:27:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 23:27:38] 2.9.2.0 3652207 2508 91772 155998 2 50 24215974 36864000 0 130560 0 1430066 99.988 96037 8367 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 23:27:38] CVMFS is ok
[2026-02-07 23:27:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 23:27:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 23:27:38] Further information can be found at the LHC@home message board.
[2026-02-07 23:27:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 23:27:38] Checking for apptainer binary...
[2026-02-07 23:27:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 23:27:38] Running /usr/bin/apptainer --version
[2026-02-07 23:27:38] apptainer version 1.4.1-1.1
[2026-02-07 23:27:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 23:27:38] magicA244a
[2026-02-07 23:27:38] apptainer works
[2026-02-07 23:27:38] Set ATHENA_PROC_NUMBER=4
[2026-02-07 23:27:38] Set ATHENA_CORE_NUMBER=4
[2026-02-07 23:27:38] Starting ATLAS job with PandaID=7000144375
[2026-02-07 23:27:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 00:30:03]  *** The last 200 lines of the pilot log: ***
[2026-02-08 00:30:03] 2026-02-07 23:29:33,297 | INFO     | will attempt to kill all subprocesses of pid=4168504
[2026-02-08 00:30:03] 2026-02-07 23:29:33,341 | INFO     | process IDs to be killed: [4168504] (in reverse order)
[2026-02-08 00:30:03] 2026-02-07 23:29:33,368 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 00:30:03] 2026-02-07 23:29:33,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 00:30:03] 2026-02-07 23:29:33,370 | INFO     | did not find any defunct processes belonging to 4168504
[2026-02-08 00:30:03] 2026-02-07 23:29:33,371 | INFO     | did not find any defunct processes belonging to 4168504
[2026-02-08 00:30:03] 2026-02-07 23:29:33,371 | INFO     | ready for new job
[2026-02-08 00:30:03] 2026-02-07 23:29:33,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 00:30:03] 2026-02-07 23:29:33,372 | INFO     | **************************************
[2026-02-08 00:30:03] 2026-02-07 23:29:33,372 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-08 00:30:03] 2026-02-07 23:29:33,372 | INFO     | **************************************
[2026-02-08 00:30:03] 2026-02-07 23:29:33,372 | INFO     | 
[2026-02-08 00:30:03] 2026-02-07 23:29:33,372 | INFO     | architecture information:
[2026-02-08 00:30:03] 2026-02-07 23:29:33,372 | INFO     | executing command: cat /etc/os-release
[2026-02-08 00:30:03] 2026-02-07 23:29:33,382 | INFO     | cat /etc/os-release:
[2026-02-08 00:30:03] NAME="CentOS Linux"
[2026-02-08 00:30:03] VERSION="7 (Core)"
[2026-02-08 00:30:03] ID="centos"
[2026-02-08 00:30:03] ID_LIKE="rhel fedora"
[2026-02-08 00:30:03] VERSION_ID="7"
[2026-02-08 00:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 00:30:03] ANSI_COLOR="0;31"
[2026-02-08 00:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 00:30:03] HOME_URL="https://www.centos.org/"
[2026-02-08 00:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 00:30:03] 
[2026-02-08 00:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 00:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 00:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 00:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 00:30:03] 
[2026-02-08 00:30:03] 2026-02-07 23:29:33,382 | INFO     | **************************************
[2026-02-08 00:30:03] 2026-02-07 23:29:33,886 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-08 00:30:03] 2026-02-07 23:29:33,899 | INFO     | sufficient remaining disk space (331339530240 B)
[2026-02-08 00:30:03] 2026-02-07 23:29:33,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 00:30:03] 2026-02-07 23:29:33,899 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 00:30:03] 2026-02-07 23:29:33,900 | INFO     | update_server=False
[2026-02-08 00:30:03] 2026-02-07 23:29:33,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 00:30:03] 2026-02-07 23:29:33,900 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 00:30:03] 2026-02-07 23:29:33,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 00:30:03] 2026-02-07 23:29:33,911 | INFO     | all data control threads have been joined
[2026-02-08 00:30:03] 2026-02-07 23:29:33,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 00:30:03] 2026-02-07 23:29:33,985 | INFO     | aborting loop
[2026-02-08 00:30:03] 2026-02-07 23:29:34,233 | INFO     | all job control threads have been joined
[2026-02-08 00:30:03] 2026-02-07 23:29:34,381 | INFO     | all payload control threads have been joined
[2026-02-08 00:30:03] 2026-02-07 23:29:34,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 00:30:03] 2026-02-07 23:29:34,905 | INFO     | [job] retrieve thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:34,906 | INFO     | [job] queue monitor thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:34,916 | INFO     | [data] control thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:34,991 | INFO     | [job] job monitor thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,233 | INFO     | [payload] validate_post thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,238 | INFO     | [job] control thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,326 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,331 | INFO     | [job] validate thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,387 | INFO     | [payload] control thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,388 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,454 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,588 | INFO     | [data] copytool_in thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:35,739 | INFO     | [payload] failed_post thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:36,308 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:36,662 | INFO     | [data] copytool_out thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:37,907 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 00:30:03] 2026-02-07 23:29:53,356 | INFO     | [monitor] cgroup control has ended
[2026-02-08 00:30:03] 2026-02-07 23:29:55,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677560440640)>', '<ExcThread(monitor, started 140676486395648)>']
[2026-02-08 00:30:03] 2026-02-07 23:30:00,132 | INFO     | all workflow threads have been joined
[2026-02-08 00:30:03] 2026-02-07 23:30:00,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 00:30:03] 2026-02-07 23:30:00,132 | INFO     | traces error code: 0
[2026-02-08 00:30:03] 2026-02-07 23:30:00,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 00:30:03] 2026-02-07 23:30:03,651 | INFO     | PID=4164003 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 00:30:03] 2026-02-07 23:30:03,651 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 00:30:03] 2026-02-07 23:30:03,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 00:30:03] 2026-02-07 23:30:03,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 00:30:03] 2026-02-07 23:30:03,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 00:30:03] 2026-02-07 23:30:03,651 | INFO     | [monitor] control thread has ended
[2026-02-08 00:30:03] 2026-02-07 23:30:03,702 [wrapper] ==== pilot stdout END ====
[2026-02-08 00:30:03] 2026-02-07 23:30:03,704 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 00:30:03] 2026-02-07 23:30:03,707 [wrapper] pilotpid: 4164003
[2026-02-08 00:30:03] 2026-02-07 23:30:03,709 [wrapper] Pilot exit status: 0
[2026-02-08 00:30:03] 2026-02-07 23:30:03,717 [wrapper] pandaids: 7000144375
[2026-02-08 00:30:03] 2026-02-07 23:30:03,735 [wrapper] cleanup supervisor_pilot 4173909 4164004
[2026-02-08 00:30:03] 2026-02-07 23:30:03,737 [wrapper] Test setup, not cleaning
[2026-02-08 00:30:03] 2026-02-07 23:30:03,740 [wrapper] apfmon messages muted
[2026-02-08 00:30:03] 2026-02-07 23:30:03,742 [wrapper] ==== wrapper stdout END ====
[2026-02-08 00:30:03] 2026-02-07 23:30:03,745 [wrapper] ==== wrapper stderr END ====
[2026-02-08 00:30:03]  *** Error codes and diagnostics ***
[2026-02-08 00:30:03]     "exeErrorCode": 0,
[2026-02-08 00:30:03]     "exeErrorDiag": "",
[2026-02-08 00:30:03]     "pilotErrorCode": 0,
[2026-02-08 00:30:03]     "pilotErrorDiag": "",
[2026-02-08 00:30:03]  *** Listing of results directory ***
[2026-02-08 00:30:03] total 722144
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc    584627 Feb  7 06:41 pilot3.tar.gz
[2026-02-08 00:30:03] -rwx------ 1 boinc boinc     36322 Feb  7 06:42 runpilot2-wrapper.sh
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc      5111 Feb  7 06:45 queuedata.json
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc       100 Feb  7 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 00:30:03] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 23:27 run_atlas
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc       105 Feb  7 23:27 job.xml
[2026-02-08 00:30:03] -rw-r--r-- 2 boinc boinc 539985367 Feb  7 23:27 EVNT.48466711._000024.pool.root.1
[2026-02-08 00:30:03] -rw-r--r-- 2 boinc boinc    597942 Feb  7 23:27 input.tar.gz
[2026-02-08 00:30:03] drwxrwx--x 2 boinc boinc      4096 Feb  7 23:27 shared
[2026-02-08 00:30:03] -rw-r--r-- 2 boinc boinc     15845 Feb  7 23:27 start_atlas.sh
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc         0 Feb  7 23:27 boinc_setup_complete
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc      6438 Feb  7 23:27 init_data.xml
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc         0 Feb  7 23:27 boinc_lockfile
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc      2498 Feb  7 23:27 pandaJob.out
[2026-02-08 00:30:03] -rw------- 1 boinc boinc   1009502 Feb  7 23:27 agis_schedconf.cvmfs.json
[2026-02-08 00:30:03] -rw------- 1 boinc boinc   1513088 Feb  7 23:27 agis_ddmendpoints.agis.ALL.json
[2026-02-08 00:30:03] -rw------- 1 boinc boinc       427 Feb  7 23:27 workernode_map.json
[2026-02-08 00:30:03] drwx------ 5 boinc boinc      4096 Feb  7 23:27 pilot3
[2026-02-08 00:30:03] -rw------- 1 boinc boinc        95 Feb  8 00:29 pilot_heartbeat.json
[2026-02-08 00:30:03] -rw------- 1 boinc boinc 193872994 Feb  8 00:29 HITS.48466714._001199.pool.root.1
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc       530 Feb  8 00:29 boinc_task_state.xml
[2026-02-08 00:30:03] -rw------- 1 boinc boinc      1016 Feb  8 00:29 memory_monitor_summary.json
[2026-02-08 00:30:03] -rw------- 1 boinc boinc    289924 Feb  8 00:29 log.48466714._001199.job.log.tgz.1
[2026-02-08 00:30:03] -rw------- 1 boinc boinc      6311 Feb  8 00:29 heartbeat.json
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc        27 Feb  8 00:30 wrapper_checkpoint.txt
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc      8192 Feb  8 00:30 boinc_mmap_file
[2026-02-08 00:30:03] -rw------- 1 boinc boinc       747 Feb  8 00:30 pilotlog.txt
[2026-02-08 00:30:03] -rw------- 1 boinc boinc    557342 Feb  8 00:30 log.48466714._001199.job.log.1
[2026-02-08 00:30:03] -rw------- 1 boinc boinc       357 Feb  8 00:30 output.list
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc       620 Feb  8 00:30 runtime_log
[2026-02-08 00:30:03] -rw------- 1 boinc boinc    860160 Feb  8 00:30 result.tar.gz
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc      8916 Feb  8 00:30 runtime_log.err
[2026-02-08 00:30:03] -rw------- 1 boinc boinc       661 Feb  8 00:30 dFgLDmtGq88n9Rq4apOajLDm4fhM0noT9bVooX4SDmHSaKDmffywZn.diag
[2026-02-08 00:30:03] -rw-r--r-- 1 boinc boinc     10195 Feb  8 00:30 stderr.txt
[2026-02-08 00:30:03] HITS file was successfully produced:
[2026-02-08 00:30:03] -rw------- 1 boinc boinc 193872994 Feb  8 00:29 shared/HITS.pool.root.1
[2026-02-08 00:30:03]  *** Contents of shared directory: ***
[2026-02-08 00:30:03] total 718112
[2026-02-08 00:30:03] -rw-r--r-- 2 boinc boinc 539985367 Feb  7 23:27 ATLAS.root_0
[2026-02-08 00:30:03] -rw-r--r-- 2 boinc boinc    597942 Feb  7 23:27 input.tar.gz
[2026-02-08 00:30:03] -rw-r--r-- 2 boinc boinc     15845 Feb  7 23:27 start_atlas.sh
[2026-02-08 00:30:03] -rw------- 1 boinc boinc 193872994 Feb  8 00:29 HITS.pool.root.1
[2026-02-08 00:30:03] -rw------- 1 boinc boinc    860160 Feb  8 00:30 result.tar.gz
00:30:05 (4159902): run_atlas exited; CPU time 13839.500644
00:30:05 (4159902): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN