Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:35:36 (1356631): wrapper (7.7.26015): starting
07:35:36 (1356631): wrapper: running run_atlas (--nthreads 10)
[2026-02-07 07:35:36] Arguments: --nthreads 10
[2026-02-07 07:35:36] Threads: 10
[2026-02-07 07:35:36] Checking for CVMFS
[2026-02-07 07:35:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 07:35:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 07:35:37] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 07:35:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 07:35:38] 2.13.3.0 14106 135128 224932 155984 2 646 25272597 40960001 46451 16776704 0 1494083484 99.727 1084855299 48439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 07:35:38] CVMFS is ok
[2026-02-07 07:35:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 07:35:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 07:35:38] Further information can be found at the LHC@home message board.
[2026-02-07 07:35:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 07:35:38] Checking for apptainer binary...
[2026-02-07 07:35:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 07:35:38] Running /usr/bin/apptainer --version
[2026-02-07 07:35:38] apptainer version 1.4.5-2.el9
[2026-02-07 07:35:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 07:35:38] c8-7-5.aglt2.org
[2026-02-07 07:35:38] apptainer works
[2026-02-07 07:35:38] Set ATHENA_PROC_NUMBER=10
[2026-02-07 07:35:38] Set ATHENA_CORE_NUMBER=10
[2026-02-07 07:35:39] Starting ATLAS job with PandaID=6999412178
[2026-02-07 07:35:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 08:57:39]  *** The last 200 lines of the pilot log: ***
[2026-02-07 08:57:39]  guid=c4861a23-334b-4157-b117-e57affa875ad
[2026-02-07 08:57:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 08:57:39]  is_altstaged=None
[2026-02-07 08:57:39]  is_tar=False
[2026-02-07 08:57:39]  lfn=log.48318034._010531.job.log.tgz.1
[2026-02-07 08:57:39]  mtime=0
[2026-02-07 08:57:39]  protocol_id=None
[2026-02-07 08:57:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 08:57:39]  replicas=None
[2026-02-07 08:57:39]  scope=mc23_13p6TeV
[2026-02-07 08:57:39]  status=None
[2026-02-07 08:57:39]  status_code=0
[2026-02-07 08:57:39]  storage_token=
[2026-02-07 08:57:39]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6999412178/log.48318034._010531.job.log.tgz.1
[2026-02-07 08:57:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/c0/log.48318034._010531.job.log.tgz.1
[2026-02-07 08:57:39]  workdir=None
[2026-02-07 08:57:39] ]
[2026-02-07 08:57:39] 2026-02-07 13:55:02,763 | INFO     | transferring file log.48318034._010531.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6999412178/log.48318034._010531.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 08:57:39] 2026-02-07 13:55:02,793 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6999412178/log.48318034._010531.job.log.tgz.1 /tmp/boinchome/slots/5/log.48318034._010531.job
[2026-02-07 08:57:39] 2026-02-07 13:55:02,871 | INFO     | adding to output.list: log.48318034._010531.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/c0/log.48318034._010531.job.log.tg
[2026-02-07 08:57:39] 2026-02-07 13:55:02,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 08:57:39] 2026-02-07 13:55:02,871 | INFO     | summary of transferred files:
[2026-02-07 08:57:39] 2026-02-07 13:55:02,872 | INFO     |  -- lfn=log.48318034._010531.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 08:57:39] 2026-02-07 13:55:02,872 | INFO     | stage-out finished correctly
[2026-02-07 08:57:39] 2026-02-07 13:55:03,860 | INFO     | monitor loop #292: job 0:6999412178 is in state 'finished'
[2026-02-07 08:57:39] 2026-02-07 13:55:03,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 08:57:39] 2026-02-07 13:55:04,094 | INFO     | time since job start (4670s) is within the limit (349056.0s)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,102 | INFO     | time since job start (4672s) is within the limit (349056.0s)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 08:57:39] 2026-02-07 13:55:06,372 | INFO     | monitor loop #293: job 0:6999412178 is in state 'finished'
[2026-02-07 08:57:39] 2026-02-07 13:55:06,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,533 | INFO     | job 6999412178 has state=finished
[2026-02-07 08:57:39] 2026-02-07 13:55:06,533 | INFO     | preparing for final server update for job 6999412178 in state='finished'
[2026-02-07 08:57:39] 2026-02-07 13:55:06,533 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6999412178/jobReport.json
[2026-02-07 08:57:39] 2026-02-07 13:55:06,535 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-02-07 08:57:39] 2026-02-07 13:55:06,535 | INFO     | this job has now completed (state=finished)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,535 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,535 | INFO     | log transfer has been attempted: DONE
[2026-02-07 08:57:39] 2026-02-07 13:55:06,535 | INFO     | job 6999412178 has finished - writing final server update
[2026-02-07 08:57:39] 2026-02-07 13:55:06,535 | INFO     | total number of processed events: 400 (read)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,603 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6999412178/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,604 | INFO     | extracted standard info from prmon json
[2026-02-07 08:57:39] 2026-02-07 13:55:06,604 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 08:57:39] 2026-02-07 13:55:06,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 08:57:39] 2026-02-07 13:55:06,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 08:57:39] 2026-02-07 13:55:06,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | fitting pss+swap vs Time
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | sum of square deviations: 101848286.86956538
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | sum of deviations: -4067666803.0434785
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | mean x: 1770470284.0434783
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | mean y: 2643136.347826087
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | intersect: 70712553155.76361
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | chi2: 0.03344592754615188
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | current memory leak: -39.94 B/s (using 69 data points, chi2=0.03)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,632 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | ..............................
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . Timing measurements:
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . get job = 0 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . initial setup = 35 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . payload setup = 39 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . stage-in = 0 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . payload execution = 4617 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . stage-out = 3 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | . log creation = 0 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,633 | INFO     | ..............................
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | 
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | job summary report
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | --------------------------------------------------
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | PanDA job id: 6999412178
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | task id: 48318034
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | errors: (none)
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | pilot state: finished 
[2026-02-07 08:57:39] 2026-02-07 13:55:06,987 | INFO     | transexitcode: 0
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | exeerrorcode: 0
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | exeerrordiag: 
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | exitcode: 0
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | exitmsg: OK
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | cpuconsumptiontime: 22482 s
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | nevents: 400
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | neventsw: 0
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | pid: 1378204
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | pgrp: 1378204
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | corecount: 10
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | event service: False
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | sizes: {0: 2282564, 1: 2283081, 2: 2283081, 4662: 2309321, 4666: 2318319, 4670: 2318697}
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | --------------------------------------------------
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | 
[2026-02-07 08:57:39] 2026-02-07 13:55:06,988 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | job 6999412178 has completed (purged errors)
[2026-02-07 08:57:39] 2026-02-07 13:55:07,195 | INFO     | overall cleanup function is called
[2026-02-07 08:57:39] 2026-02-07 13:55:08,349 | INFO     | --- collectZombieJob: --- 10, [1378204]
[2026-02-07 08:57:39] 2026-02-07 13:55:08,349 | INFO     | zombie collector waiting for pid 1378204
[2026-02-07 08:57:39] 2026-02-07 13:55:08,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 08:57:39] 2026-02-07 13:55:08,349 | INFO     | collected zombie processes
[2026-02-07 08:57:39] 2026-02-07 13:55:08,349 | INFO     | will attempt to kill all subprocesses of pid=1378204
[2026-02-07 08:57:39] 2026-02-07 13:55:11,948 | INFO     | process IDs to be killed: [1378204] (in reverse order)
[2026-02-07 08:57:39] 2026-02-07 13:55:12,340 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 08:57:39] 2026-02-07 13:55:12,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 08:57:39] 2026-02-07 13:55:12,634 | INFO     | did not find any defunct processes belonging to 1378204
[2026-02-07 08:57:39] 2026-02-07 13:55:13,552 | INFO     | did not find any defunct processes belonging to 1378204
[2026-02-07 08:57:39] 2026-02-07 13:55:13,553 | INFO     | ready for new job
[2026-02-07 08:57:39] 2026-02-07 13:55:13,553 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 08:57:39] 2026-02-07 13:55:13,558 | INFO     | **************************************
[2026-02-07 08:57:39] 2026-02-07 13:55:13,558 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 08:57:39] 2026-02-07 13:55:13,558 | INFO     | **************************************
[2026-02-07 08:57:39] 2026-02-07 13:55:13,558 | INFO     | 
[2026-02-07 08:57:39] 2026-02-07 13:55:13,574 | INFO     | architecture information:
[2026-02-07 08:57:39] 2026-02-07 13:55:13,582 | INFO     | executing command: cat /etc/os-release
[2026-02-07 08:57:39] 2026-02-07 13:55:13,617 | INFO     | cat /etc/os-release:
[2026-02-07 08:57:39] NAME="CentOS Linux"
[2026-02-07 08:57:39] VERSION="7 (Core)"
[2026-02-07 08:57:39] ID="centos"
[2026-02-07 08:57:39] ID_LIKE="rhel fedora"
[2026-02-07 08:57:39] VERSION_ID="7"
[2026-02-07 08:57:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 08:57:39] ANSI_COLOR="0;31"
[2026-02-07 08:57:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 08:57:39] HOME_URL="https://www.centos.org/"
[2026-02-07 08:57:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 08:57:39] 
[2026-02-07 08:57:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 08:57:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 08:57:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 08:57:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 08:57:39] 
[2026-02-07 08:57:39] 2026-02-07 13:55:13,618 | INFO     | **************************************
[2026-02-07 08:57:39] 2026-02-07 13:55:14,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-07 08:57:39] 2026-02-07 13:55:14,207 | INFO     | sufficient remaining disk space (163906060288 B)
[2026-02-07 08:57:39] 2026-02-07 13:55:14,208 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 08:57:39] 2026-02-07 13:55:14,208 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 08:57:39] 2026-02-07 13:55:14,208 | INFO     | update_server=False
[2026-02-07 08:57:39] 2026-02-07 13:55:14,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 08:57:39] 2026-02-07 13:55:14,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 08:57:39] 2026-02-07 13:55:14,480 | INFO     | all data control threads have been joined
[2026-02-07 08:57:39] 2026-02-07 13:55:14,789 | INFO     | all payload control threads have been joined
[2026-02-07 08:57:39] 2026-02-07 13:55:15,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:57:39] 2026-02-07 13:55:15,077 | INFO     | aborting loop
[2026-02-07 08:57:39] 2026-02-07 13:55:15,214 | INFO     | [job] retrieve thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,485 | INFO     | [data] control thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,565 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,567 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,567 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,567 | INFO     | [job] validate thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,717 | INFO     | [payload] failed_post thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,795 | INFO     | [payload] control thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:15,857 | INFO     | all job control threads have been joined
[2026-02-07 08:57:39] 2026-02-07 13:55:15,861 | INFO     | [data] copytool_in thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:16,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:57:39] 2026-02-07 13:55:16,085 | INFO     | [job] job monitor thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:16,214 | INFO     | [data] copytool_out thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:16,586 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:16,796 | INFO     | [payload] validate_post thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:16,875 | INFO     | [job] control thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:17,098 | INFO     | [job] queue monitor thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:17,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 08:57:39] 2026-02-07 13:55:21,113 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 08:57:39] 2026-02-07 13:55:22,070 | INFO     | [monitor] cgroup control has ended
[2026-02-07 08:57:39] 2026-02-07 13:55:23,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140326940665664)>', '<ExcThread(monitor, started 140326312343296)>']
[2026-02-07 08:57:39] 2026-02-07 13:55:28,625 | INFO     | all workflow threads have been joined
[2026-02-07 08:57:39] 2026-02-07 13:55:28,625 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 08:57:39] 2026-02-07 13:55:28,625 | INFO     | traces error code: 0
[2026-02-07 08:57:39] 2026-02-07 13:55:28,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 08:57:39] 2026-02-07 13:55:52,618 | INFO     | PID=1363360 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 08:57:39] 2026-02-07 13:55:52,618 | INFO     | .. there are 67 such processes running
[2026-02-07 08:57:39] 2026-02-07 13:55:52,627 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 08:57:39] 2026-02-07 13:55:52,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 08:57:39] 2026-02-07 13:55:52,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 08:57:39] 2026-02-07 13:55:52,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 08:57:39] 2026-02-07 13:55:52,627 | INFO     | [monitor] control thread has ended
[2026-02-07 08:57:39] 2026-02-07 13:55:53,091 [wrapper] ==== pilot stdout END ====
[2026-02-07 08:57:39] 2026-02-07 13:55:53,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 08:57:39] 2026-02-07 13:55:53,227 [wrapper] pilotpid: 1363360
[2026-02-07 08:57:39] 2026-02-07 13:55:53,237 [wrapper] Pilot exit status: 0
[2026-02-07 08:57:39] 2026-02-07 13:55:53,360 [wrapper] pandaids: 6999412178
[2026-02-07 08:57:39] 2026-02-07 13:55:53,877 [wrapper] cleanup supervisor_pilot 2255844 1363361
[2026-02-07 08:57:39] 2026-02-07 13:55:53,908 [wrapper] Test setup, not cleaning
[2026-02-07 08:57:39] 2026-02-07 13:55:53,926 [wrapper] apfmon messages muted
[2026-02-07 08:57:39] 2026-02-07 13:55:53,946 [wrapper] ==== wrapper stdout END ====
[2026-02-07 08:57:39] 2026-02-07 13:55:53,961 [wrapper] ==== wrapper stderr END ====
[2026-02-07 08:57:39]  *** Error codes and diagnostics ***
[2026-02-07 08:57:39]     "exeErrorCode": 0,
[2026-02-07 08:57:39]     "exeErrorDiag": "",
[2026-02-07 08:57:39]     "pilotErrorCode": 0,
[2026-02-07 08:57:39]     "pilotErrorDiag": "",
[2026-02-07 08:57:39]  *** Listing of results directory ***
[2026-02-07 08:57:39] total 668572
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas    584627 Feb  7 00:41 pilot3.tar.gz
[2026-02-07 08:57:39] -rwx------. 1 boincer umatlas     36322 Feb  7 00:42 runpilot2-wrapper.sh
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas      5111 Feb  7 00:43 queuedata.json
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas       100 Feb  7 07:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 08:57:39] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 07:35 run_atlas
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas       105 Feb  7 07:35 job.xml
[2026-02-07 08:57:39] -rw-r--r--. 2 boincer umatlas 497088045 Feb  7 07:35 EVNT.48318032._000200.pool.root.1
[2026-02-07 08:57:39] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 07:35 start_atlas.sh
[2026-02-07 08:57:39] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 07:35 shared
[2026-02-07 08:57:39] -rw-r--r--. 2 boincer umatlas    597959 Feb  7 07:35 input.tar.gz
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas         0 Feb  7 07:35 boinc_lockfile
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas      2537 Feb  7 07:35 pandaJob.out
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas        57 Feb  7 07:35 setup.sh.local
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas   1009494 Feb  7 07:36 agis_schedconf.cvmfs.json
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas   1513088 Feb  7 07:36 agis_ddmendpoints.agis.ALL.json
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas       430 Feb  7 07:37 workernode_map.json
[2026-02-07 08:57:39] drwx------. 5 boincer umatlas      4096 Feb  7 07:37 pilot3
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas 181578188 Feb  7 08:53 HITS.48318034._010531.pool.root.1
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas       531 Feb  7 08:53 boinc_task_state.xml
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas      1053 Feb  7 08:54 memory_monitor_summary.json
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas    383518 Feb  7 08:55 log.48318034._010531.job.log.tgz.1
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas      6374 Feb  7 08:55 heartbeat.json
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas        95 Feb  7 08:55 pilot_heartbeat.json
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas       823 Feb  7 08:55 pilotlog.txt
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas    622080 Feb  7 08:55 log.48318034._010531.job.log.1
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas       357 Feb  7 08:55 output.list
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas       620 Feb  7 08:55 runtime_log
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas   1024000 Feb  7 08:55 result.tar.gz
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas      9333 Feb  7 08:55 runtime_log.err
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas       655 Feb  7 08:55 g65NDmCGq88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9haKDm8s40Cn.diag
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas      7172 Feb  7 08:57 init_data.xml
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 08:57 boinc_mmap_file
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas        27 Feb  7 08:57 wrapper_checkpoint.txt
[2026-02-07 08:57:39] -rw-r--r--. 1 boincer umatlas     21421 Feb  7 08:57 stderr.txt
[2026-02-07 08:57:39] HITS file was successfully produced:
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas 181578188 Feb  7 08:53 shared/HITS.pool.root.1
[2026-02-07 08:57:39]  *** Contents of shared directory: ***
[2026-02-07 08:57:39] total 664372
[2026-02-07 08:57:39] -rw-r--r--. 2 boincer umatlas 497088045 Feb  7 07:35 ATLAS.root_0
[2026-02-07 08:57:39] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 07:35 start_atlas.sh
[2026-02-07 08:57:39] -rw-r--r--. 2 boincer umatlas    597959 Feb  7 07:35 input.tar.gz
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas 181578188 Feb  7 08:53 HITS.pool.root.1
[2026-02-07 08:57:39] -rw-------. 1 boincer umatlas   1024000 Feb  7 08:55 result.tar.gz
08:57:40 (1356631): run_atlas exited; CPU time 22654.425216
08:57:40 (1356631): called boinc_finish(0)

</stderr_txt>
]]>

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