Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:40:15 (3677176): wrapper (7.7.26015): starting
07:40:15 (3677176): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 07:40:15] Arguments: --nthreads 8
[2026-02-07 07:40:15] Threads: 8
[2026-02-07 07:40:15] Checking for CVMFS
[2026-02-07 07:40:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 07:40:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 07:40:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 07:40:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 07:40:15] 2.11.3.0 278442 98609 212992 155988 1 244 28659050 45568001 17337 130560 0 559645486 99.791 335531681 22006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-07 07:40:15] CVMFS is ok
[2026-02-07 07:40:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 07:40:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 07:40:15] Further information can be found at the LHC@home message board.
[2026-02-07 07:40:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 07:40:15] Checking for apptainer binary...
[2026-02-07 07:40:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 07:40:15] Running /usr/bin/apptainer --version
[2026-02-07 07:40:15] apptainer version 1.4.1-1.el9
[2026-02-07 07:40:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 07:40:15] wns0021.triumf.lcg
[2026-02-07 07:40:15] apptainer works
[2026-02-07 07:40:15] Set ATHENA_PROC_NUMBER=8
[2026-02-07 07:40:15] Set ATHENA_CORE_NUMBER=8
[2026-02-07 07:40:15] Starting ATLAS job with PandaID=7000739753
[2026-02-07 07:40:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 07:44:40]  *** The last 200 lines of the pilot log: ***
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | INFO     | will not add max space = 0 B to job metrics
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | WARNING  | wrong length of table data, x=[1770478908.0], y=[8516.0] (must be same and length>=4)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | ..............................
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . Timing measurements:
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . get job = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . initial setup = 25 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . payload setup = 12 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . stage-in = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . payload execution = 27 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . stage-out = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | . log creation = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | ..............................
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000739753/pilotlog.txt
[2026-02-07 07:44:40] 2026-02-07 15:44:08,102 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 07:44:40] - Log from pilotlog.txt -
[2026-02-07 07:44:40] 2026-02-07 15:44:08,042 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 07:44:40] 2026-02-07 15:44:08,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | WARNING  | found no stored workdir sizes
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | INFO     | will not add max space = 0 B to job metrics
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | WARNING  | wrong length of table data, x=[1770478908.0], y=[8516.0] (must be same and length>=4)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | ..............................
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . Timing measurements:
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . get job = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . initial setup = 25 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . payload setup = 12 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . stage-in = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . payload execution = 27 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . stage-out = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | . log creation = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | ..............................
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000739753/pilotlog.txt
[2026-02-07 07:44:40] 2026-02-07 15:44:08,103 | WARNING  | 
[2026-02-07 07:44:40] [begin log extracts]
[2026-02-07 07:44:40] - Log from pilotlog.txt -
[2026-02-07 07:44:40] 2026-02-07 15:44:08,042 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 07:44:40] 2026-02-07 15:44:08,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | WARNING  | found no stored workdir sizes
[2026-02-07 07:44:40] 2026-02-07 15:44:08,043 | INFO     | will not add max space = 0 B to job metrics
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | WARNING  | wrong length of table data, x=[1770478908.0], y=[8516.0] (must be same and length>=4)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | ..............................
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . Timing measurements:
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . get job = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . initial setup = 25 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . payload setup = 12 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . stage-in = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . payload execution = 27 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,044 | INFO     | . stage-out = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | . log creation = 0 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | ..............................
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 07:44:40] 2026-02-07 15:44:08,045 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000739753/pilotlog.txt
[2026-02-07 07:44:40] [end log extracts]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,103 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,104 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | 
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | job summary report
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | --------------------------------------------------
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | PanDA job id: 7000739753
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | task id: 48442031
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 07:42:01,622 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | pilot state: failed 
[2026-02-07 07:44:40] 2026-02-07 15:44:08,235 | INFO     | transexitcode: 65
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | exeerrorcode: 65
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | exitcode: 65
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | cpuconsumptiontime: 14 s
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | nevents: 0
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | neventsw: 0
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | pid: 3685658
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | pgrp: 3685658
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | corecount: 8
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | event service: False
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | sizes: {0: 2281955, 1: 2282637, 2: 2282665, 3: 2283098, 14: 2283126, 43: 2306365, 44: 2306469, 45: 2310789, 46: 2310817, 162: 2310983}
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | --------------------------------------------------
[2026-02-07 07:44:40] 2026-02-07 15:44:08,236 | INFO     | 
[2026-02-07 07:44:40] 2026-02-07 15:44:08,237 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 07:44:40] 2026-02-07 15:44:08,256 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | job 7000739753 has completed (purged errors)
[2026-02-07 07:44:40] 2026-02-07 15:44:08,258 | INFO     | overall cleanup function is called
[2026-02-07 07:44:40] 2026-02-07 15:44:09,265 | INFO     | --- collectZombieJob: --- 10, [3685658]
[2026-02-07 07:44:40] 2026-02-07 15:44:09,265 | INFO     | zombie collector waiting for pid 3685658
[2026-02-07 07:44:40] 2026-02-07 15:44:09,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 07:44:40] 2026-02-07 15:44:09,265 | INFO     | collected zombie processes
[2026-02-07 07:44:40] 2026-02-07 15:44:09,266 | INFO     | will attempt to kill all subprocesses of pid=3685658
[2026-02-07 07:44:40] 2026-02-07 15:44:10,111 | INFO     | process IDs to be killed: [3685658] (in reverse order)
[2026-02-07 07:44:40] 2026-02-07 15:44:10,172 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 07:44:40] 2026-02-07 15:44:10,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 07:44:40] 2026-02-07 15:44:10,179 | INFO     | did not find any defunct processes belonging to 3685658
[2026-02-07 07:44:40] 2026-02-07 15:44:10,186 | INFO     | did not find any defunct processes belonging to 3685658
[2026-02-07 07:44:40] 2026-02-07 15:44:10,187 | INFO     | ready for new job
[2026-02-07 07:44:40] 2026-02-07 15:44:10,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 07:44:40] 2026-02-07 15:44:10,188 | INFO     | **************************************
[2026-02-07 07:44:40] 2026-02-07 15:44:10,188 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 07:44:40] 2026-02-07 15:44:10,188 | INFO     | **************************************
[2026-02-07 07:44:40] 2026-02-07 15:44:10,188 | INFO     | 
[2026-02-07 07:44:40] 2026-02-07 15:44:10,190 | INFO     | architecture information:
[2026-02-07 07:44:40] 2026-02-07 15:44:10,190 | INFO     | executing command: cat /etc/os-release
[2026-02-07 07:44:40] 2026-02-07 15:44:10,199 | INFO     | cat /etc/os-release:
[2026-02-07 07:44:40] NAME="CentOS Linux"
[2026-02-07 07:44:40] VERSION="7 (Core)"
[2026-02-07 07:44:40] ID="centos"
[2026-02-07 07:44:40] ID_LIKE="rhel fedora"
[2026-02-07 07:44:40] VERSION_ID="7"
[2026-02-07 07:44:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 07:44:40] ANSI_COLOR="0;31"
[2026-02-07 07:44:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 07:44:40] HOME_URL="https://www.centos.org/"
[2026-02-07 07:44:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 07:44:40] 
[2026-02-07 07:44:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 07:44:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 07:44:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 07:44:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 07:44:40] 
[2026-02-07 07:44:40] 2026-02-07 15:44:10,200 | INFO     | **************************************
[2026-02-07 07:44:40] 2026-02-07 15:44:10,718 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 07:44:40] 2026-02-07 15:44:10,807 | INFO     | sufficient remaining disk space (1388195086336 B)
[2026-02-07 07:44:40] 2026-02-07 15:44:10,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 07:44:40] 2026-02-07 15:44:10,808 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 07:44:40] 2026-02-07 15:44:10,808 | INFO     | update_server=False
[2026-02-07 07:44:40] 2026-02-07 15:44:10,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 07:44:40] 2026-02-07 15:44:10,987 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 07:44:40] 2026-02-07 15:44:10,987 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 07:44:40] 2026-02-07 15:44:10,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:44:40] 2026-02-07 15:44:10,988 | INFO     | will abort loop
[2026-02-07 07:44:40] 2026-02-07 15:44:11,385 | INFO     | all job control threads have been joined
[2026-02-07 07:44:40] 2026-02-07 15:44:11,583 | INFO     | all data control threads have been joined
[2026-02-07 07:44:40] 2026-02-07 15:44:11,598 | INFO     | [monitor] cgroup control has ended
[2026-02-07 07:44:40] 2026-02-07 15:44:11,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 07:44:40] 2026-02-07 15:44:11,835 | INFO     | [job] retrieve thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:11,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 07:44:40] 2026-02-07 15:44:11,989 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:11,993 | INFO     | [job] job monitor thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,007 | INFO     | all payload control threads have been joined
[2026-02-07 07:44:40] 2026-02-07 15:44:12,391 | INFO     | [job] control thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,513 | INFO     | [payload] failed_post thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,524 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,561 | INFO     | [data] copytool_in thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,597 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,602 | INFO     | [data] control thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:12,653 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:13,012 | INFO     | [payload] control thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:13,055 | INFO     | [job] validate thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:13,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:44:40] 2026-02-07 15:44:13,261 | INFO     | [payload] validate_post thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:13,930 | INFO     | [data] copytool_out thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:14,255 | INFO     | [job] queue monitor thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:15,692 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 07:44:40] 2026-02-07 15:44:17,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226760099648)>', '<ExcThread(monitor, started 140226370459392)>']
[2026-02-07 07:44:40] 2026-02-07 15:44:22,165 | INFO     | all workflow threads have been joined
[2026-02-07 07:44:40] 2026-02-07 15:44:22,165 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 07:44:40] 2026-02-07 15:44:22,165 | INFO     | traces error code: 0
[2026-02-07 07:44:40] 2026-02-07 15:44:22,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 07:44:40] 2026-02-07 15:44:40,686 | INFO     | PID=3681051 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 07:44:40] 2026-02-07 15:44:40,687 | INFO     | .. there are 26 such processes running
[2026-02-07 07:44:40] 2026-02-07 15:44:40,687 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 07:44:40] 2026-02-07 15:44:40,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 07:44:41] 2026-02-07 15:44:40,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 07:44:41] 2026-02-07 15:44:40,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 07:44:41] 2026-02-07 15:44:40,688 | INFO     | [monitor] control thread has ended
[2026-02-07 07:44:41] 2026-02-07 15:44:40,809 [wrapper] ==== pilot stdout END ====
[2026-02-07 07:44:41] 2026-02-07 15:44:40,812 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 07:44:41] 2026-02-07 15:44:40,813 [wrapper] pilotpid: 3681051
[2026-02-07 07:44:41] 2026-02-07 15:44:40,815 [wrapper] Pilot exit status: 0
[2026-02-07 07:44:41] 2026-02-07 15:44:40,824 [wrapper] pandaids: 7000739753
[2026-02-07 07:44:41] 2026-02-07 15:44:40,860 [wrapper] cleanup supervisor_pilot 3681057 3681052
[2026-02-07 07:44:41] 2026-02-07 15:44:40,865 [wrapper] Test setup, not cleaning
[2026-02-07 07:44:41] 2026-02-07 15:44:40,867 [wrapper] apfmon messages muted
[2026-02-07 07:44:41] 2026-02-07 15:44:40,872 [wrapper] ==== wrapper stdout END ====
[2026-02-07 07:44:41] 2026-02-07 15:44:40,874 [wrapper] ==== wrapper stderr END ====
[2026-02-07 07:44:41]  *** Error codes and diagnostics ***
[2026-02-07 07:44:41]     "exeErrorCode": 65,
[2026-02-07 07:44:41]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 07:44:41]     "pilotErrorCode": 1305,
[2026-02-07 07:44:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 07:44:41]  *** Listing of results directory ***
[2026-02-07 07:44:41] total 483288
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc    584627 Feb  7 03:17 pilot3.tar.gz
[2026-02-07 07:44:41] -rwx------. 1 boinc boinc     36322 Feb  7 03:18 runpilot2-wrapper.sh
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc      5111 Feb  7 03:20 queuedata.json
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc       100 Feb  7 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 07:44:41] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 07:40 run_atlas
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc       105 Feb  7 07:40 job.xml
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc      6444 Feb  7 07:40 init_data.xml
[2026-02-07 07:44:41] -rw-r--r--. 2 boinc boinc 490747297 Feb  7 07:40 EVNT.48442027._000058.pool.root.1
[2026-02-07 07:44:41] -rw-r--r--. 2 boinc boinc     15845 Feb  7 07:40 start_atlas.sh
[2026-02-07 07:44:41] drwxrwx--x. 2 boinc boinc      4096 Feb  7 07:40 shared
[2026-02-07 07:44:41] -rw-r--r--. 2 boinc boinc    597964 Feb  7 07:40 input.tar.gz
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc         0 Feb  7 07:40 boinc_lockfile
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc      2529 Feb  7 07:40 pandaJob.out
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc   1009502 Feb  7 07:40 agis_schedconf.cvmfs.json
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc   1513088 Feb  7 07:40 agis_ddmendpoints.agis.ALL.json
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc       436 Feb  7 07:41 workernode_map.json
[2026-02-07 07:44:41] drwx------. 5 boinc boinc      4096 Feb  7 07:41 pilot3
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc       523 Feb  7 07:42 boinc_task_state.xml
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc       956 Feb  7 07:42 memory_monitor_summary.json
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc     20955 Feb  7 07:42 log.48442031._002948.job.log.tgz.1
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc        95 Feb  7 07:43 pilot_heartbeat.json
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc      7001 Feb  7 07:44 heartbeat.json
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc      8192 Feb  7 07:44 boinc_mmap_file
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc        22 Feb  7 07:44 wrapper_checkpoint.txt
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc       823 Feb  7 07:44 pilotlog.txt
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc     81884 Feb  7 07:44 log.48442031._002948.job.log.1
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc       188 Feb  7 07:44 output.list
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc       620 Feb  7 07:44 runtime_log
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc    122880 Feb  7 07:44 result.tar.gz
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc      8633 Feb  7 07:44 runtime_log.err
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc       644 Feb  7 07:44 dI9MDmfVv88n9Rq4apOajLDm4fhM0noT9bVooX4SDmjqaKDmj3KCjm.diag
[2026-02-07 07:44:41] -rw-r--r--. 1 boinc boinc     21710 Feb  7 07:44 stderr.txt
[2026-02-07 07:44:41] No HITS result produced
[2026-02-07 07:44:41]  *** Contents of shared directory: ***
[2026-02-07 07:44:41] total 479972
[2026-02-07 07:44:41] -rw-r--r--. 2 boinc boinc 490747297 Feb  7 07:40 ATLAS.root_0
[2026-02-07 07:44:41] -rw-r--r--. 2 boinc boinc     15845 Feb  7 07:40 start_atlas.sh
[2026-02-07 07:44:41] -rw-r--r--. 2 boinc boinc    597964 Feb  7 07:40 input.tar.gz
[2026-02-07 07:44:41] -rw-------. 1 boinc boinc    122880 Feb  7 07:44 result.tar.gz
07:44:42 (3677176): run_atlas exited; CPU time 20.985003
07:44:42 (3677176): called boinc_finish(0)

</stderr_txt>
]]>

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