Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:07:55 (2714938): wrapper (7.7.26015): starting
06:07:55 (2714938): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 06:07:55] Arguments: --nthreads 8
[2026-02-07 06:07:55] Threads: 8
[2026-02-07 06:07:55] Checking for CVMFS
[2026-02-07 06:07:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:07:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:07:56] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:07:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:07:56] 2.13.3.0 11460 135090 264840 155980 3 633 21956552 32935937 25610 16776704 0 973391004 99.626 934950858 36043 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 06:07:56] CVMFS is ok
[2026-02-07 06:07:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 06:07:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 06:07:56] Further information can be found at the LHC@home message board.
[2026-02-07 06:07:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:07:56] Checking for apptainer binary...
[2026-02-07 06:07:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:07:56] Running /usr/bin/apptainer --version
[2026-02-07 06:07:56] apptainer version 1.4.5-2.el9
[2026-02-07 06:07:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:07:56] c7-3-34.aglt2.org
[2026-02-07 06:07:56] apptainer works
[2026-02-07 06:07:56] Set ATHENA_PROC_NUMBER=8
[2026-02-07 06:07:56] Set ATHENA_CORE_NUMBER=8
[2026-02-07 06:07:56] Starting ATLAS job with PandaID=6993057919
[2026-02-07 06:07:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 07:35:35]  *** The last 200 lines of the pilot log: ***
[2026-02-07 07:35:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 07:35:35]  is_altstaged=None
[2026-02-07 07:35:35]  is_tar=False
[2026-02-07 07:35:35]  lfn=log.48310589._005468.job.log.tgz.1
[2026-02-07 07:35:35]  mtime=0
[2026-02-07 07:35:35]  protocol_id=None
[2026-02-07 07:35:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 07:35:35]  replicas=None
[2026-02-07 07:35:35]  scope=mc23_13p6TeV
[2026-02-07 07:35:35]  status=None
[2026-02-07 07:35:35]  status_code=0
[2026-02-07 07:35:35]  storage_token=
[2026-02-07 07:35:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6993057919/log.48310589._005468.job.log.tgz.1
[2026-02-07 07:35:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/14/log.48310589._005468.job.log.tgz.1
[2026-02-07 07:35:35]  workdir=None
[2026-02-07 07:35:35] ]
[2026-02-07 07:35:35] 2026-02-07 12:34:47,825 | INFO     | transferring file log.48310589._005468.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6993057919/log.48310589._005468.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 07:35:35] 2026-02-07 12:34:47,825 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6993057919/log.48310589._005468.job.log.tgz.1 /tmp/boinchome/slots/1/log.48310589._005468.job
[2026-02-07 07:35:35] 2026-02-07 12:34:47,856 | INFO     | adding to output.list: log.48310589._005468.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/14/log.48310589._005468.job.log.tg
[2026-02-07 07:35:35] 2026-02-07 12:34:47,857 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 07:35:35] 2026-02-07 12:34:47,857 | INFO     | summary of transferred files:
[2026-02-07 07:35:35] 2026-02-07 12:34:47,857 | INFO     |  -- lfn=log.48310589._005468.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 07:35:35] 2026-02-07 12:34:47,857 | INFO     | stage-out finished correctly
[2026-02-07 07:35:35] 2026-02-07 12:34:48,007 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 07:35:35] 2026-02-07 12:34:48,198 | INFO     | time since job start (5189s) is within the limit (349056.0s)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,428 | INFO     | job 6993057919 has state=finished
[2026-02-07 07:35:35] 2026-02-07 12:34:48,429 | INFO     | preparing for final server update for job 6993057919 in state='finished'
[2026-02-07 07:35:35] 2026-02-07 12:34:48,429 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6993057919/jobReport.json
[2026-02-07 07:35:35] 2026-02-07 12:34:48,431 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-07 07:35:35] 2026-02-07 12:34:48,431 | INFO     | this job has now completed (state=finished)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,431 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,431 | INFO     | log transfer has been attempted: DONE
[2026-02-07 07:35:35] 2026-02-07 12:34:48,432 | INFO     | job 6993057919 has finished - writing final server update
[2026-02-07 07:35:35] 2026-02-07 12:34:48,432 | INFO     | total number of processed events: 400 (read)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,653 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6993057919/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,654 | INFO     | extracted standard info from prmon json
[2026-02-07 07:35:35] 2026-02-07 12:34:48,654 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 07:35:35] 2026-02-07 12:34:48,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 07:35:35] 2026-02-07 12:34:48,694 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 07:35:35] 2026-02-07 12:34:48,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 07:35:35] 2026-02-07 12:34:48,704 | INFO     | fitting pss+swap vs Time
[2026-02-07 07:35:35] 2026-02-07 12:34:48,712 | INFO     | sum of square deviations: 147146132.6794875
[2026-02-07 07:35:35] 2026-02-07 12:34:48,712 | INFO     | sum of deviations: 1186094024.2692316
[2026-02-07 07:35:35] 2026-02-07 12:34:48,712 | INFO     | mean x: 1770465181.602564
[2026-02-07 07:35:35] 2026-02-07 12:34:48,712 | INFO     | mean y: 2512668.653846154
[2026-02-07 07:35:35] 2026-02-07 12:34:48,712 | INFO     | intersect: -14268594113.67396
[2026-02-07 07:35:35] 2026-02-07 12:34:48,713 | INFO     | chi2: 0.04777392229106419
[2026-02-07 07:35:35] 2026-02-07 12:34:48,713 | INFO     | current memory leak: 8.06 B/s (using 78 data points, chi2=0.05)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,717 | INFO     | could have reported an average CPU frequency of 3049 MHz (6 samples)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,717 | INFO     | ..............................
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . Timing measurements:
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . get job = 0 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . initial setup = 9 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . payload setup = 10 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . stage-in = 0 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . payload execution = 5160 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . stage-out = 1 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | . log creation = 0 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,718 | INFO     | ..............................
[2026-02-07 07:35:35] 2026-02-07 12:34:48,954 | INFO     | 
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | job summary report
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | --------------------------------------------------
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | PanDA job id: 6993057919
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | task id: 48310589
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | errors: (none)
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | pilot state: finished 
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | transexitcode: 0
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | exeerrorcode: 0
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | exeerrordiag: 
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | exitcode: 0
[2026-02-07 07:35:35] 2026-02-07 12:34:48,955 | INFO     | exitmsg: OK
[2026-02-07 07:35:35] 2026-02-07 12:34:48,960 | INFO     | cpuconsumptiontime: 30065 s
[2026-02-07 07:35:35] 2026-02-07 12:34:48,960 | INFO     | nevents: 400
[2026-02-07 07:35:35] 2026-02-07 12:34:48,960 | INFO     | neventsw: 0
[2026-02-07 07:35:35] 2026-02-07 12:34:48,962 | INFO     | pid: 2728595
[2026-02-07 07:35:35] 2026-02-07 12:34:48,962 | INFO     | pgrp: 2728595
[2026-02-07 07:35:35] 2026-02-07 12:34:48,962 | INFO     | corecount: 8
[2026-02-07 07:35:35] 2026-02-07 12:34:48,962 | INFO     | event service: False
[2026-02-07 07:35:35] 2026-02-07 12:34:48,963 | INFO     | sizes: {0: 2283095, 11: 2283095, 5174: 2309575, 5177: 2318629, 5178: 2318767}
[2026-02-07 07:35:35] 2026-02-07 12:34:48,963 | INFO     | --------------------------------------------------
[2026-02-07 07:35:35] 2026-02-07 12:34:48,963 | INFO     | 
[2026-02-07 07:35:35] 2026-02-07 12:34:48,963 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-07 07:35:35] 2026-02-07 12:34:49,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,016 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 07:35:35] 2026-02-07 12:34:49,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 07:35:35] 2026-02-07 12:34:49,017 | INFO     | job 6993057919 has completed (purged errors)
[2026-02-07 07:35:35] 2026-02-07 12:34:49,018 | INFO     | overall cleanup function is called
[2026-02-07 07:35:35] 2026-02-07 12:34:50,027 | INFO     | --- collectZombieJob: --- 10, [2728595]
[2026-02-07 07:35:35] 2026-02-07 12:34:50,028 | INFO     | zombie collector waiting for pid 2728595
[2026-02-07 07:35:35] 2026-02-07 12:34:50,028 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 07:35:35] 2026-02-07 12:34:50,028 | INFO     | collected zombie processes
[2026-02-07 07:35:35] 2026-02-07 12:34:50,028 | INFO     | will attempt to kill all subprocesses of pid=2728595
[2026-02-07 07:35:35] 2026-02-07 12:34:51,998 | INFO     | process IDs to be killed: [2728595] (in reverse order)
[2026-02-07 07:35:35] 2026-02-07 12:34:52,332 | WARNING  | process 2728595 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 07:35:35] 2026-02-07 12:34:52,492 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 07:35:35] 2026-02-07 12:34:52,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 07:35:35] 2026-02-07 12:34:52,587 | INFO     | did not find any defunct processes belonging to 2728595
[2026-02-07 07:35:35] 2026-02-07 12:34:52,613 | INFO     | did not find any defunct processes belonging to 2728595
[2026-02-07 07:35:35] 2026-02-07 12:34:52,614 | INFO     | ready for new job
[2026-02-07 07:35:35] 2026-02-07 12:34:52,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 07:35:35] 2026-02-07 12:34:52,615 | INFO     | **************************************
[2026-02-07 07:35:35] 2026-02-07 12:34:52,615 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-07 07:35:35] 2026-02-07 12:34:52,615 | INFO     | **************************************
[2026-02-07 07:35:35] 2026-02-07 12:34:52,616 | INFO     | 
[2026-02-07 07:35:35] 2026-02-07 12:34:52,629 | INFO     | architecture information:
[2026-02-07 07:35:35] 2026-02-07 12:34:52,632 | INFO     | executing command: cat /etc/os-release
[2026-02-07 07:35:35] 2026-02-07 12:34:52,671 | INFO     | cat /etc/os-release:
[2026-02-07 07:35:35] NAME="CentOS Linux"
[2026-02-07 07:35:35] VERSION="7 (Core)"
[2026-02-07 07:35:35] ID="centos"
[2026-02-07 07:35:35] ID_LIKE="rhel fedora"
[2026-02-07 07:35:35] VERSION_ID="7"
[2026-02-07 07:35:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 07:35:35] ANSI_COLOR="0;31"
[2026-02-07 07:35:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 07:35:35] HOME_URL="https://www.centos.org/"
[2026-02-07 07:35:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 07:35:35] 
[2026-02-07 07:35:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 07:35:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 07:35:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 07:35:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 07:35:35] 
[2026-02-07 07:35:35] 2026-02-07 12:34:52,671 | INFO     | **************************************
[2026-02-07 07:35:35] 2026-02-07 12:34:53,180 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 07:35:35] 2026-02-07 12:34:53,207 | INFO     | sufficient remaining disk space (70005030912 B)
[2026-02-07 07:35:35] 2026-02-07 12:34:53,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 07:35:35] 2026-02-07 12:34:53,207 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 07:35:35] 2026-02-07 12:34:53,207 | INFO     | update_server=False
[2026-02-07 07:35:35] 2026-02-07 12:34:53,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 07:35:35] 2026-02-07 12:34:53,256 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 07:35:35] 2026-02-07 12:34:53,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 07:35:35] 2026-02-07 12:34:53,647 | INFO     | all job control threads have been joined
[2026-02-07 07:35:35] 2026-02-07 12:34:53,844 | INFO     | number of running child processes to parent process 2728595: 1
[2026-02-07 07:35:35] 2026-02-07 12:34:53,845 | INFO     | maximum number of monitored processes: 6
[2026-02-07 07:35:35] 2026-02-07 12:34:53,845 | INFO     | aborting job monitoring since job object (job id=6993057919) has expired
[2026-02-07 07:35:35] 2026-02-07 12:34:53,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:35:35] 2026-02-07 12:34:53,845 | INFO     | will abort loop
[2026-02-07 07:35:35] 2026-02-07 12:34:53,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:35:35] 2026-02-07 12:34:54,179 | INFO     | all data control threads have been joined
[2026-02-07 07:35:35] 2026-02-07 12:34:54,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 07:35:35] 2026-02-07 12:34:54,212 | INFO     | [job] retrieve thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,667 | INFO     | all payload control threads have been joined
[2026-02-07 07:35:35] 2026-02-07 12:34:54,669 | INFO     | [job] control thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,743 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,750 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,851 | INFO     | [job] job monitor thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,861 | INFO     | [payload] failed_post thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,891 | INFO     | [job] validate thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:54,987 | INFO     | [job] queue monitor thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:55,015 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:55,065 | INFO     | [data] copytool_in thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:55,185 | INFO     | [data] control thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:55,503 | INFO     | [data] copytool_out thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:55,672 | INFO     | [payload] control thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:55,750 | INFO     | [payload] validate_post thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:34:58,201 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:35:03,821 | INFO     | job.realtimelogging is not enabled
[2026-02-07 07:35:35] 2026-02-07 12:35:04,827 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 07:35:35] 2026-02-07 12:35:21,881 | INFO     | PID=2723344 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 07:35:35] 2026-02-07 12:35:21,881 | INFO     | .. there are 25 such processes running
[2026-02-07 07:35:35] 2026-02-07 12:35:21,881 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 07:35:35] 2026-02-07 12:35:21,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 07:35:35] 2026-02-07 12:35:21,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 07:35:35] 2026-02-07 12:35:27,928 | INFO     | [monitor] cgroup control has ended
[2026-02-07 07:35:35] 2026-02-07 12:35:30,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503520933696)>', '<ExcThread(monitor, started 140503177737984)>']
[2026-02-07 07:35:35] 2026-02-07 12:35:30,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 07:35:35] 2026-02-07 12:35:30,936 | INFO     | [monitor] control thread has ended
[2026-02-07 07:35:35] 2026-02-07 12:35:35,062 | INFO     | all workflow threads have been joined
[2026-02-07 07:35:35] 2026-02-07 12:35:35,062 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 07:35:35] 2026-02-07 12:35:35,063 | INFO     | traces error code: 0
[2026-02-07 07:35:35] 2026-02-07 12:35:35,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 07:35:35] 2026-02-07 12:35:35,437 [wrapper] ==== pilot stdout END ====
[2026-02-07 07:35:35] 2026-02-07 12:35:35,439 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 07:35:35] 2026-02-07 12:35:35,442 [wrapper] pilotpid: 2723344
[2026-02-07 07:35:35] 2026-02-07 12:35:35,444 [wrapper] Pilot exit status: 0
[2026-02-07 07:35:35] 2026-02-07 12:35:35,496 [wrapper] pandaids: 6993057919
[2026-02-07 07:35:35] 2026-02-07 12:35:35,642 [wrapper] cleanup supervisor_pilot 3170139 2723345
[2026-02-07 07:35:35] 2026-02-07 12:35:35,647 [wrapper] Test setup, not cleaning
[2026-02-07 07:35:35] 2026-02-07 12:35:35,660 [wrapper] apfmon messages muted
[2026-02-07 07:35:35] 2026-02-07 12:35:35,676 [wrapper] ==== wrapper stdout END ====
[2026-02-07 07:35:35] 2026-02-07 12:35:35,700 [wrapper] ==== wrapper stderr END ====
[2026-02-07 07:35:35]  *** Error codes and diagnostics ***
[2026-02-07 07:35:35]     "exeErrorCode": 0,
[2026-02-07 07:35:35]     "exeErrorDiag": "",
[2026-02-07 07:35:35]     "pilotErrorCode": 0,
[2026-02-07 07:35:35]     "pilotErrorDiag": "",
[2026-02-07 07:35:35]  *** Listing of results directory ***
[2026-02-07 07:35:35] total 660064
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 02:02 pilot3.tar.gz
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 02:05 queuedata.json
[2026-02-07 07:35:35] -rwx------. 1 boincer umatlas     36322 Jan 30 02:06 runpilot2-wrapper.sh
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas       100 Feb  7 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 07:35:35] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 06:07 run_atlas
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas       105 Feb  7 06:07 job.xml
[2026-02-07 07:35:35] -rw-r--r--. 2 boincer umatlas 489841664 Feb  7 06:07 EVNT.48310585._000107.pool.root.1
[2026-02-07 07:35:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 06:07 start_atlas.sh
[2026-02-07 07:35:35] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 06:07 shared
[2026-02-07 07:35:35] -rw-r--r--. 2 boincer umatlas    597765 Feb  7 06:07 input.tar.gz
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas         0 Feb  7 06:07 boinc_lockfile
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas      2529 Feb  7 06:07 pandaJob.out
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas        57 Feb  7 06:07 setup.sh.local
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas   1009488 Feb  7 06:08 agis_schedconf.cvmfs.json
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas   1513088 Feb  7 06:08 agis_ddmendpoints.agis.ALL.json
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas       428 Feb  7 06:08 workernode_map.json
[2026-02-07 07:35:35] drwx------. 5 boincer umatlas      4096 Feb  7 06:08 pilot3
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas      6944 Feb  7 07:27 init_data.xml
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas 179953970 Feb  7 07:33 HITS.48310589._005468.pool.root.1
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas       531 Feb  7 07:33 boinc_task_state.xml
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas      1042 Feb  7 07:34 memory_monitor_summary.json
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas    351299 Feb  7 07:34 log.48310589._005468.job.log.tgz.1
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas      6345 Feb  7 07:34 heartbeat.json
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas        95 Feb  7 07:34 pilot_heartbeat.json
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 07:35 boinc_mmap_file
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas        27 Feb  7 07:35 wrapper_checkpoint.txt
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas      5299 Feb  7 07:35 pilotlog.txt
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas    731148 Feb  7 07:35 log.48310589._005468.job.log.1
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas       357 Feb  7 07:35 output.list
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas       620 Feb  7 07:35 runtime_log
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas   1095680 Feb  7 07:35 result.tar.gz
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas      9336 Feb  7 07:35 runtime_log.err
[2026-02-07 07:35:35] -rw-------. 1 boincer umatlas       654 Feb  7 07:35 qhuNDm7kx58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmJjKKDmaKupDo.diag
[2026-02-07 07:35:35] -rw-r--r--. 1 boincer umatlas     21423 Feb  7 07:35 stderr.txt
[2026-02-07 07:35:35] HITS file was successfully produced:
[2026-02-07 07:35:36] -rw-------. 1 boincer umatlas 179953970 Feb  7 07:33 shared/HITS.pool.root.1
[2026-02-07 07:35:36]  *** Contents of shared directory: ***
[2026-02-07 07:35:36] total 655784
[2026-02-07 07:35:36] -rw-r--r--. 2 boincer umatlas 489841664 Feb  7 06:07 ATLAS.root_0
[2026-02-07 07:35:36] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 06:07 start_atlas.sh
[2026-02-07 07:35:36] -rw-r--r--. 2 boincer umatlas    597765 Feb  7 06:07 input.tar.gz
[2026-02-07 07:35:36] -rw-------. 1 boincer umatlas 179953970 Feb  7 07:33 HITS.pool.root.1
[2026-02-07 07:35:36] -rw-------. 1 boincer umatlas   1095680 Feb  7 07:35 result.tar.gz
07:35:37 (2714938): run_atlas exited; CPU time 30279.802933
07:35:37 (2714938): called boinc_finish(0)

</stderr_txt>
]]>

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