Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:41:08 (2556245): wrapper (7.7.26015): starting
06:41:08 (2556245): wrapper: running run_atlas (--nthreads 9)
[2026-02-07 06:41:08] Arguments: --nthreads 9
[2026-02-07 06:41:08] Threads: 9
[2026-02-07 06:41:08] Checking for CVMFS
[2026-02-07 06:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:41:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:41:08] 2.13.3.0 2295398 58593 113060 155982 0 50 27130978 37030913 1832 16776704 0 44251673 99.978 2393660 36011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 06:41:08] CVMFS is ok
[2026-02-07 06:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 06:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 06:41:08] Further information can be found at the LHC@home message board.
[2026-02-07 06:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:41:08] Checking for apptainer binary...
[2026-02-07 06:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:41:08] Running /usr/bin/apptainer --version
[2026-02-07 06:41:08] apptainer version 1.4.5-2.el9
[2026-02-07 06:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:41:08] c-205-36.aglt2.org
[2026-02-07 06:41:08] apptainer works
[2026-02-07 06:41:08] Set ATHENA_PROC_NUMBER=9
[2026-02-07 06:41:08] Set ATHENA_CORE_NUMBER=9
[2026-02-07 06:41:08] Starting ATLAS job with PandaID=6998624362
[2026-02-07 06:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 08:36:40]  *** The last 200 lines of the pilot log: ***
[2026-02-07 08:36:40] 2026-02-07 13:36:15,254 | INFO     | extracted standard info from prmon json
[2026-02-07 08:36:40] 2026-02-07 13:36:15,254 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 08:36:40] 2026-02-07 13:36:15,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 08:36:40] 2026-02-07 13:36:15,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 08:36:40] 2026-02-07 13:36:15,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 08:36:40] 2026-02-07 13:36:15,257 | INFO     | fitting pss+swap vs Time
[2026-02-07 08:36:40] 2026-02-07 13:36:15,258 | INFO     | sum of square deviations: 447383272.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,259 | INFO     | sum of deviations: 435408484.0000086
[2026-02-07 08:36:40] 2026-02-07 13:36:15,259 | INFO     | mean x: 1770467919.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,259 | INFO     | mean y: 2604043.8230088498
[2026-02-07 08:36:40] 2026-02-07 13:36:15,259 | INFO     | intersect: -1720475026.917124
[2026-02-07 08:36:40] 2026-02-07 13:36:15,259 | INFO     | chi2: 2.0698591409289255
[2026-02-07 08:36:40] 2026-02-07 13:36:15,260 | INFO     | sum of square deviations: 390582207.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,260 | INFO     | sum of deviations: 7710393472.999996
[2026-02-07 08:36:40] 2026-02-07 13:36:15,260 | INFO     | mean x: 1770467766.5
[2026-02-07 08:36:40] 2026-02-07 13:36:15,261 | INFO     | mean y: 2622858.1666666665
[2026-02-07 08:36:40] 2026-02-07 13:36:15,261 | INFO     | intersect: -34947773924.70184
[2026-02-07 08:36:40] 2026-02-07 13:36:15,261 | INFO     | chi2: 1.3775833952241898
[2026-02-07 08:36:40] 2026-02-07 13:36:15,261 | INFO     | current chi2=1.3775833952241898 (change=33.44554863738464 %)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,261 | INFO     | sum of square deviations: 338804492.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,262 | INFO     | sum of deviations: 7372640316.000001
[2026-02-07 08:36:40] 2026-02-07 13:36:15,262 | INFO     | mean x: 1770467614.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,262 | INFO     | mean y: 2621862.669902913
[2026-02-07 08:36:40] 2026-02-07 13:36:15,262 | INFO     | intersect: -38524083707.54056
[2026-02-07 08:36:40] 2026-02-07 13:36:15,263 | INFO     | chi2: 1.3802311046805384
[2026-02-07 08:36:40] 2026-02-07 13:36:15,263 | INFO     | current chi2=1.3802311046805384 (change=-0.19219957684795785 %)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,263 | INFO     | right removable region: 102
[2026-02-07 08:36:40] 2026-02-07 13:36:15,263 | INFO     | sum of square deviations: 390582207.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,264 | INFO     | sum of deviations: -15116668091.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,264 | INFO     | mean x: 1770468071.5
[2026-02-07 08:36:40] 2026-02-07 13:36:15,264 | INFO     | mean y: 2644850.1481481483
[2026-02-07 08:36:40] 2026-02-07 13:36:15,264 | INFO     | intersect: 68524911668.560486
[2026-02-07 08:36:40] 2026-02-07 13:36:15,265 | INFO     | chi2: 0.7988920125680243
[2026-02-07 08:36:40] 2026-02-07 13:36:15,265 | INFO     | current chi2=0.7988920125680243 (change=61.40355656233244 %)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,265 | INFO     | sum of square deviations: 338804492.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,266 | INFO     | sum of deviations: -12822092030.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,266 | INFO     | mean x: 1770468224.0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,266 | INFO     | mean y: 2637887.2524271845
[2026-02-07 08:36:40] 2026-02-07 13:36:15,266 | INFO     | intersect: 67006196105.47893
[2026-02-07 08:36:40] 2026-02-07 13:36:15,266 | INFO     | chi2: 0.7775547245340934
[2026-02-07 08:36:40] 2026-02-07 13:36:15,266 | INFO     | current chi2=0.7775547245340934 (change=2.6708601035254618 %)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,267 | INFO     | left removable region: 20
[2026-02-07 08:36:40] 2026-02-07 13:36:15,267 | INFO     | sum of square deviations: 170944600.5
[2026-02-07 08:36:40] 2026-02-07 13:36:15,267 | INFO     | sum of deviations: -647669330.0000002
[2026-02-07 08:36:40] 2026-02-07 13:36:15,267 | INFO     | mean x: 1770468193.5
[2026-02-07 08:36:40] 2026-02-07 13:36:15,267 | INFO     | mean y: 2641297.8780487804
[2026-02-07 08:36:40] 2026-02-07 13:36:15,268 | INFO     | intersect: 6710533476.493282
[2026-02-07 08:36:40] 2026-02-07 13:36:15,268 | INFO     | chi2: 0.019698968656659988
[2026-02-07 08:36:40] 2026-02-07 13:36:15,268 | INFO     | current memory leak: -3.79 B/s (using 82 data points, chi2=0.02)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,268 | INFO     | could have reported an average CPU frequency of 2675 MHz (7 samples)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | ..............................
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . Timing measurements:
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . get job = 0 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . initial setup = 6 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . payload setup = 5 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . stage-in = 0 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . payload execution = 6870 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,269 | INFO     | . stage-out = 1 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,270 | INFO     | . log creation = 0 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,270 | INFO     | ..............................
[2026-02-07 08:36:40] 2026-02-07 13:36:15,313 | INFO     | time since job start (6892s) is within the limit (349056.0s)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,374 | INFO     | 
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | job summary report
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | --------------------------------------------------
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | PanDA job id: 6998624362
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | task id: 48431113
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | errors: (none)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | pilot state: finished 
[2026-02-07 08:36:40] 2026-02-07 13:36:15,375 | INFO     | transexitcode: 0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | exeerrorcode: 0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | exeerrordiag: 
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | exitcode: 0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | exitmsg: OK
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | cpuconsumptiontime: 57364 s
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | nevents: 400
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | neventsw: 0
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | pid: 2564374
[2026-02-07 08:36:40] 2026-02-07 13:36:15,376 | INFO     | pgrp: 2564374
[2026-02-07 08:36:40] 2026-02-07 13:36:15,377 | INFO     | corecount: 9
[2026-02-07 08:36:40] 2026-02-07 13:36:15,377 | INFO     | event service: False
[2026-02-07 08:36:40] 2026-02-07 13:36:15,377 | INFO     | sizes: {0: 2282743, 1: 2283147, 11: 2283147, 6879: 2310476, 6881: 2319668}
[2026-02-07 08:36:40] 2026-02-07 13:36:15,377 | INFO     | --------------------------------------------------
[2026-02-07 08:36:40] 2026-02-07 13:36:15,377 | INFO     | 
[2026-02-07 08:36:40] 2026-02-07 13:36:15,377 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-07 08:36:40] 2026-02-07 13:36:15,394 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,394 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,394 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,394 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 08:36:40] 2026-02-07 13:36:15,396 | INFO     | job 6998624362 has completed (purged errors)
[2026-02-07 08:36:40] 2026-02-07 13:36:15,397 | INFO     | overall cleanup function is called
[2026-02-07 08:36:40] 2026-02-07 13:36:16,405 | INFO     | --- collectZombieJob: --- 10, [2564374]
[2026-02-07 08:36:40] 2026-02-07 13:36:16,406 | INFO     | zombie collector waiting for pid 2564374
[2026-02-07 08:36:40] 2026-02-07 13:36:16,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 08:36:40] 2026-02-07 13:36:16,406 | INFO     | collected zombie processes
[2026-02-07 08:36:40] 2026-02-07 13:36:16,406 | INFO     | will attempt to kill all subprocesses of pid=2564374
[2026-02-07 08:36:40] 2026-02-07 13:36:16,599 | INFO     | process IDs to be killed: [2564374] (in reverse order)
[2026-02-07 08:36:40] 2026-02-07 13:36:16,653 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 08:36:40] 2026-02-07 13:36:16,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 08:36:40] 2026-02-07 13:36:16,658 | INFO     | did not find any defunct processes belonging to 2564374
[2026-02-07 08:36:40] 2026-02-07 13:36:16,663 | INFO     | did not find any defunct processes belonging to 2564374
[2026-02-07 08:36:40] 2026-02-07 13:36:16,663 | INFO     | ready for new job
[2026-02-07 08:36:40] 2026-02-07 13:36:16,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 08:36:40] 2026-02-07 13:36:16,665 | INFO     | **************************************
[2026-02-07 08:36:40] 2026-02-07 13:36:16,665 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 08:36:40] 2026-02-07 13:36:16,665 | INFO     | **************************************
[2026-02-07 08:36:40] 2026-02-07 13:36:16,665 | INFO     | 
[2026-02-07 08:36:40] 2026-02-07 13:36:16,667 | INFO     | architecture information:
[2026-02-07 08:36:40] 2026-02-07 13:36:16,668 | INFO     | executing command: cat /etc/os-release
[2026-02-07 08:36:40] 2026-02-07 13:36:16,681 | INFO     | cat /etc/os-release:
[2026-02-07 08:36:40] NAME="CentOS Linux"
[2026-02-07 08:36:40] VERSION="7 (Core)"
[2026-02-07 08:36:40] ID="centos"
[2026-02-07 08:36:40] ID_LIKE="rhel fedora"
[2026-02-07 08:36:40] VERSION_ID="7"
[2026-02-07 08:36:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 08:36:40] ANSI_COLOR="0;31"
[2026-02-07 08:36:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 08:36:40] HOME_URL="https://www.centos.org/"
[2026-02-07 08:36:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 08:36:40] 
[2026-02-07 08:36:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 08:36:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 08:36:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 08:36:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 08:36:40] 
[2026-02-07 08:36:40] 2026-02-07 13:36:16,681 | INFO     | **************************************
[2026-02-07 08:36:40] 2026-02-07 13:36:17,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 08:36:40] 2026-02-07 13:36:17,198 | INFO     | sufficient remaining disk space (38444990464 B)
[2026-02-07 08:36:40] 2026-02-07 13:36:17,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 08:36:40] 2026-02-07 13:36:17,199 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 08:36:40] 2026-02-07 13:36:17,199 | INFO     | update_server=False
[2026-02-07 08:36:40] 2026-02-07 13:36:17,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 08:36:40] 2026-02-07 13:36:17,200 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-07 08:36:40] 2026-02-07 13:36:17,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:36:40] 2026-02-07 13:36:17,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 08:36:40] 2026-02-07 13:36:17,200 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 08:36:40] 2026-02-07 13:36:17,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 08:36:40] 2026-02-07 13:36:17,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 08:36:40] 2026-02-07 13:36:17,375 | INFO     | all data control threads have been joined
[2026-02-07 08:36:40] 2026-02-07 13:36:17,462 | INFO     | all payload control threads have been joined
[2026-02-07 08:36:40] 2026-02-07 13:36:18,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 08:36:40] 2026-02-07 13:36:18,205 | INFO     | [job] retrieve thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,206 | INFO     | [job] queue monitor thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,346 | INFO     | [payload] failed_post thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,381 | INFO     | [data] control thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,439 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,467 | INFO     | [payload] control thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,559 | INFO     | all job control threads have been joined
[2026-02-07 08:36:40] 2026-02-07 13:36:18,671 | INFO     | [data] copytool_in thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,821 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:18,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:19,243 | INFO     | [payload] validate_post thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:19,321 | INFO     | [job] validate thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:19,541 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:19,565 | INFO     | [job] control thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:20,000 | WARNING  | process 2564374 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 08:36:40] 2026-02-07 13:36:20,148 | INFO     | [data] copytool_out thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:20,160 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 08:36:40] 2026-02-07 13:36:20,350 | INFO     | number of running child processes to parent process 2564374: 1
[2026-02-07 08:36:40] 2026-02-07 13:36:20,350 | INFO     | maximum number of monitored processes: 6
[2026-02-07 08:36:40] 2026-02-07 13:36:20,351 | INFO     | aborting job monitoring since job object (job id=6998624362) has expired
[2026-02-07 08:36:40] 2026-02-07 13:36:20,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 08:36:40] 2026-02-07 13:36:20,351 | INFO     | will abort loop
[2026-02-07 08:36:40] 2026-02-07 13:36:21,203 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:21,356 | INFO     | [job] job monitor thread has finished
[2026-02-07 08:36:40] 2026-02-07 13:36:32,713 | INFO     | [monitor] cgroup control has ended
[2026-02-07 08:36:40] 2026-02-07 13:36:34,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195242927936)>', '<ExcThread(monitor, started 140194728613632)>']
[2026-02-07 08:36:40] 2026-02-07 13:36:35,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 08:36:40] 2026-02-07 13:36:35,288 | INFO     | [monitor] control thread has ended
[2026-02-07 08:36:40] 2026-02-07 13:36:39,849 | INFO     | all workflow threads have been joined
[2026-02-07 08:36:40] 2026-02-07 13:36:39,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 08:36:40] 2026-02-07 13:36:39,850 | INFO     | traces error code: 0
[2026-02-07 08:36:40] 2026-02-07 13:36:39,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 08:36:40] 2026-02-07 13:36:39,956 [wrapper] ==== pilot stdout END ====
[2026-02-07 08:36:40] 2026-02-07 13:36:39,959 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 08:36:40] 2026-02-07 13:36:39,961 [wrapper] pilotpid: 2560002
[2026-02-07 08:36:40] 2026-02-07 13:36:39,963 [wrapper] Pilot exit status: 0
[2026-02-07 08:36:40] 2026-02-07 13:36:39,973 [wrapper] pandaids: 6998624362
[2026-02-07 08:36:40] 2026-02-07 13:36:40,009 [wrapper] cleanup supervisor_pilot 2662844 2560003
[2026-02-07 08:36:40] 2026-02-07 13:36:40,012 [wrapper] Test setup, not cleaning
[2026-02-07 08:36:40] 2026-02-07 13:36:40,015 [wrapper] apfmon messages muted
[2026-02-07 08:36:40] 2026-02-07 13:36:40,017 [wrapper] ==== wrapper stdout END ====
[2026-02-07 08:36:40] 2026-02-07 13:36:40,019 [wrapper] ==== wrapper stderr END ====
[2026-02-07 08:36:40]  *** Error codes and diagnostics ***
[2026-02-07 08:36:40]     "exeErrorCode": 0,
[2026-02-07 08:36:40]     "exeErrorDiag": "",
[2026-02-07 08:36:40]     "pilotErrorCode": 0,
[2026-02-07 08:36:40]     "pilotErrorDiag": "",
[2026-02-07 08:36:40]  *** Listing of results directory ***
[2026-02-07 08:36:40] total 887736
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 22:47 pilot3.tar.gz
[2026-02-07 08:36:40] -rwx------. 1 boincer umatlas     36322 Feb  6 22:48 runpilot2-wrapper.sh
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 22:49 queuedata.json
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas       100 Feb  7 06:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 08:36:40] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 06:41 run_atlas
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas       105 Feb  7 06:41 job.xml
[2026-02-07 08:36:40] -rw-r--r--. 2 boincer umatlas 648291387 Feb  7 06:41 EVNT.48431111._000079.pool.root.1
[2026-02-07 08:36:40] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 06:41 start_atlas.sh
[2026-02-07 08:36:40] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 06:41 shared
[2026-02-07 08:36:40] -rw-r--r--. 2 boincer umatlas    597955 Feb  7 06:41 input.tar.gz
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas         0 Feb  7 06:41 boinc_lockfile
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas      2545 Feb  7 06:41 pandaJob.out
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas   1009494 Feb  7 06:41 agis_schedconf.cvmfs.json
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas   1513088 Feb  7 06:41 agis_ddmendpoints.agis.ALL.json
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas       435 Feb  7 06:41 workernode_map.json
[2026-02-07 08:36:40] drwx------. 5 boincer umatlas      4096 Feb  7 06:41 pilot3
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas      6530 Feb  7 08:31 init_data.xml
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas       530 Feb  7 08:35 boinc_task_state.xml
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas 254013781 Feb  7 08:35 HITS.48431113._003980.pool.root.1
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas        95 Feb  7 08:35 pilot_heartbeat.json
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas      1034 Feb  7 08:36 memory_monitor_summary.json
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas    397042 Feb  7 08:36 log.48431113._003980.job.log.tgz.1
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas      6374 Feb  7 08:36 heartbeat.json
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 08:36 boinc_mmap_file
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas        27 Feb  7 08:36 wrapper_checkpoint.txt
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas      5069 Feb  7 08:36 pilotlog.txt
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas   1002739 Feb  7 08:36 log.48431113._003980.job.log.1
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas       357 Feb  7 08:36 output.list
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas       620 Feb  7 08:36 runtime_log
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas   1413120 Feb  7 08:36 result.tar.gz
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas      8816 Feb  7 08:36 runtime_log.err
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas       652 Feb  7 08:36 ebBODmOUo88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQWaKDmH68U3m.diag
[2026-02-07 08:36:40] -rw-r--r--. 1 boincer umatlas     20991 Feb  7 08:36 stderr.txt
[2026-02-07 08:36:40] HITS file was successfully produced:
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas 254013781 Feb  7 08:35 shared/HITS.pool.root.1
[2026-02-07 08:36:40]  *** Contents of shared directory: ***
[2026-02-07 08:36:40] total 883152
[2026-02-07 08:36:40] -rw-r--r--. 2 boincer umatlas 648291387 Feb  7 06:41 ATLAS.root_0
[2026-02-07 08:36:40] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 06:41 start_atlas.sh
[2026-02-07 08:36:40] -rw-r--r--. 2 boincer umatlas    597955 Feb  7 06:41 input.tar.gz
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas 254013781 Feb  7 08:35 HITS.pool.root.1
[2026-02-07 08:36:40] -rw-------. 1 boincer umatlas   1413120 Feb  7 08:36 result.tar.gz
08:36:42 (2556245): run_atlas exited; CPU time 57526.290825
08:36:42 (2556245): called boinc_finish(0)

</stderr_txt>
]]>

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