Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:03:05 (1758114): wrapper (7.7.26015): starting
16:03:05 (1758114): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 16:03:05] Arguments: --nthreads 12
[2026-02-07 16:03:05] Threads: 12
[2026-02-07 16:03:05] Checking for CVMFS
[2026-02-07 16:03:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 16:03:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 16:03:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 16:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 16:03:06] 2.13.3.0 4008 13868 139260 155986 1 196 36215431 46080001 10789 130560 0 58455240 99.902 21765099 18519 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-02-07 16:03:06] CVMFS is ok
[2026-02-07 16:03:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 16:03:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 16:03:06] Further information can be found at the LHC@home message board.
[2026-02-07 16:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 16:03:06] Checking for apptainer binary...
[2026-02-07 16:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 16:03:06] Running /usr/bin/apptainer --version
[2026-02-07 16:03:07] apptainer version 1.4.5-2.el9
[2026-02-07 16:03:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 16:03:07] mff2103.farm.particle.cz
[2026-02-07 16:03:07] apptainer works
[2026-02-07 16:03:07] Set ATHENA_PROC_NUMBER=12
[2026-02-07 16:03:07] Set ATHENA_CORE_NUMBER=12
[2026-02-07 16:03:07] Starting ATLAS job with PandaID=7004057759
[2026-02-07 16:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 17:32:59]  *** The last 200 lines of the pilot log: ***
[2026-02-07 17:32:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 17:32:59]  is_altstaged=None
[2026-02-07 17:32:59]  is_tar=False
[2026-02-07 17:32:59]  lfn=log.48431096._006432.job.log.tgz.1
[2026-02-07 17:32:59]  mtime=0
[2026-02-07 17:32:59]  protocol_id=None
[2026-02-07 17:32:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 17:32:59]  replicas=None
[2026-02-07 17:32:59]  scope=mc23_13p6TeV
[2026-02-07 17:32:59]  status=None
[2026-02-07 17:32:59]  status_code=0
[2026-02-07 17:32:59]  storage_token=
[2026-02-07 17:32:59]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-7004057759/log.48431096._006432.job.log.tgz.1
[2026-02-07 17:32:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/fe/log.48431096._006432.job.log.tgz.1
[2026-02-07 17:32:59]  workdir=None
[2026-02-07 17:32:59] ]
[2026-02-07 17:32:59] 2026-02-07 16:32:19,961 | INFO     | transferring file log.48431096._006432.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-7004057759/log.48431096._006432.job.log.tgz.1 to /scratch/.boinc/slot
[2026-02-07 17:32:59] 2026-02-07 16:32:19,961 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-7004057759/log.48431096._006432.job.log.tgz.1 /scratch/.boinc/slots/5/log.48431096._006432.j
[2026-02-07 17:32:59] 2026-02-07 16:32:19,983 | INFO     | adding to output.list: log.48431096._006432.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/fe/log.48431096._006432.job.log.tg
[2026-02-07 17:32:59] 2026-02-07 16:32:19,984 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 17:32:59] 2026-02-07 16:32:19,984 | INFO     | summary of transferred files:
[2026-02-07 17:32:59] 2026-02-07 16:32:19,984 | INFO     |  -- lfn=log.48431096._006432.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 17:32:59] 2026-02-07 16:32:19,985 | INFO     | stage-out finished correctly
[2026-02-07 17:32:59] 2026-02-07 16:32:21,668 | INFO     | time since job start (5317s) is within the limit (349056.0s)
[2026-02-07 17:32:59] 2026-02-07 16:32:22,271 | INFO     | monitor loop #379: job 0:7004057759 is in state 'finished'
[2026-02-07 17:32:59] 2026-02-07 16:32:22,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 17:32:59] 2026-02-07 16:32:23,039 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 17:32:59] 2026-02-07 16:32:23,674 | INFO     | time since job start (5319s) is within the limit (349056.0s)
[2026-02-07 17:32:59] 2026-02-07 16:32:24,777 | INFO     | monitor loop #380: job 0:7004057759 is in state 'finished'
[2026-02-07 17:32:59] 2026-02-07 16:32:24,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,493 | INFO     | job 7004057759 has state=finished
[2026-02-07 17:32:59] 2026-02-07 16:32:25,493 | INFO     | preparing for final server update for job 7004057759 in state='finished'
[2026-02-07 17:32:59] 2026-02-07 16:32:25,493 | INFO     | reading metadata from: /scratch/.boinc/slots/5/PanDA_Pilot-7004057759/jobReport.json
[2026-02-07 17:32:59] 2026-02-07 16:32:25,496 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/5/workernode_map.json
[2026-02-07 17:32:59] 2026-02-07 16:32:25,497 | INFO     | this job has now completed (state=finished)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,497 | INFO     | log transfer has been attempted: DONE
[2026-02-07 17:32:59] 2026-02-07 16:32:25,497 | INFO     | job 7004057759 has finished - writing final server update
[2026-02-07 17:32:59] 2026-02-07 16:32:25,497 | INFO     | total number of processed events: 400 (read)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,515 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-7004057759/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,516 | INFO     | extracted standard info from prmon json
[2026-02-07 17:32:59] 2026-02-07 16:32:25,516 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 17:32:59] 2026-02-07 16:32:25,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 17:32:59] 2026-02-07 16:32:25,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 17:32:59] 2026-02-07 16:32:25,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 17:32:59] 2026-02-07 16:32:25,518 | INFO     | fitting pss+swap vs Time
[2026-02-07 17:32:59] 2026-02-07 16:32:25,519 | INFO     | sum of square deviations: 158737860.0
[2026-02-07 17:32:59] 2026-02-07 16:32:25,519 | INFO     | sum of deviations: 2325926614.5
[2026-02-07 17:32:59] 2026-02-07 16:32:25,519 | INFO     | mean x: 1770479377.5
[2026-02-07 17:32:59] 2026-02-07 16:32:25,519 | INFO     | mean y: 2756240.3625
[2026-02-07 17:32:59] 2026-02-07 16:32:25,519 | INFO     | intersect: -25939417255.932854
[2026-02-07 17:32:59] 2026-02-07 16:32:25,520 | INFO     | chi2: 0.004017011205585753
[2026-02-07 17:32:59] 2026-02-07 16:32:25,520 | INFO     | current memory leak: 14.65 B/s (using 80 data points, chi2=0.00)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,520 | INFO     | could have reported an average CPU frequency of 2721 MHz (6 samples)
[2026-02-07 17:32:59] 2026-02-07 16:32:25,520 | INFO     | ..............................
[2026-02-07 17:32:59] 2026-02-07 16:32:25,520 | INFO     | . Timing measurements:
[2026-02-07 17:32:59] 2026-02-07 16:32:25,520 | INFO     | . get job = 0 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | . initial setup = 13 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | . payload setup = 16 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | . stage-in = 0 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | . payload execution = 5290 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | . stage-out = 1 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | . log creation = 0 s
[2026-02-07 17:32:59] 2026-02-07 16:32:25,521 | INFO     | ..............................
[2026-02-07 17:32:59] 2026-02-07 16:32:25,680 | INFO     | time since job start (5321s) is within the limit (349056.0s)
[2026-02-07 17:32:59] 2026-02-07 16:32:26,003 | INFO     | 
[2026-02-07 17:32:59] 2026-02-07 16:32:26,003 | INFO     | job summary report
[2026-02-07 17:32:59] 2026-02-07 16:32:26,003 | INFO     | --------------------------------------------------
[2026-02-07 17:32:59] 2026-02-07 16:32:26,003 | INFO     | PanDA job id: 7004057759
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | task id: 48431096
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | errors: (none)
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | pilot state: finished 
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | transexitcode: 0
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | exeerrorcode: 0
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | exeerrordiag: 
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | exitcode: 0
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | exitmsg: OK
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | cpuconsumptiontime: 55438 s
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | nevents: 400
[2026-02-07 17:32:59] 2026-02-07 16:32:26,004 | INFO     | neventsw: 0
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | pid: 1768373
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | pgrp: 1768373
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | corecount: 12
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | event service: False
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | sizes: {0: 2282650, 1: 2283111, 5311: 2309627, 5314: 2318627, 5317: 2318683, 5320: 2318877}
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | --------------------------------------------------
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | 
[2026-02-07 17:32:59] 2026-02-07 16:32:26,005 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-02-07 17:32:59] 2026-02-07 16:32:26,080 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 17:32:59] 2026-02-07 16:32:26,083 | INFO     | job 7004057759 has completed (purged errors)
[2026-02-07 17:32:59] 2026-02-07 16:32:26,083 | INFO     | overall cleanup function is called
[2026-02-07 17:32:59] 2026-02-07 16:32:27,097 | INFO     | --- collectZombieJob: --- 10, [1768373]
[2026-02-07 17:32:59] 2026-02-07 16:32:27,098 | INFO     | zombie collector waiting for pid 1768373
[2026-02-07 17:32:59] 2026-02-07 16:32:27,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 17:32:59] 2026-02-07 16:32:27,098 | INFO     | collected zombie processes
[2026-02-07 17:32:59] 2026-02-07 16:32:27,098 | INFO     | will attempt to kill all subprocesses of pid=1768373
[2026-02-07 17:32:59] 2026-02-07 16:32:27,552 | INFO     | process IDs to be killed: [1768373] (in reverse order)
[2026-02-07 17:32:59] 2026-02-07 16:32:27,699 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 17:32:59] 2026-02-07 16:32:27,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 17:32:59] 2026-02-07 16:32:27,715 | INFO     | did not find any defunct processes belonging to 1768373
[2026-02-07 17:32:59] 2026-02-07 16:32:27,729 | INFO     | did not find any defunct processes belonging to 1768373
[2026-02-07 17:32:59] 2026-02-07 16:32:27,729 | INFO     | ready for new job
[2026-02-07 17:32:59] 2026-02-07 16:32:27,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 17:32:59] 2026-02-07 16:32:27,732 | INFO     | **************************************
[2026-02-07 17:32:59] 2026-02-07 16:32:27,732 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 17:32:59] 2026-02-07 16:32:27,732 | INFO     | **************************************
[2026-02-07 17:32:59] 2026-02-07 16:32:27,732 | INFO     | 
[2026-02-07 17:32:59] 2026-02-07 16:32:27,738 | INFO     | architecture information:
[2026-02-07 17:32:59] 2026-02-07 16:32:27,739 | INFO     | executing command: cat /etc/os-release
[2026-02-07 17:32:59] 2026-02-07 16:32:27,762 | INFO     | cat /etc/os-release:
[2026-02-07 17:32:59] NAME="CentOS Linux"
[2026-02-07 17:32:59] VERSION="7 (Core)"
[2026-02-07 17:32:59] ID="centos"
[2026-02-07 17:32:59] ID_LIKE="rhel fedora"
[2026-02-07 17:32:59] VERSION_ID="7"
[2026-02-07 17:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 17:32:59] ANSI_COLOR="0;31"
[2026-02-07 17:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 17:32:59] HOME_URL="https://www.centos.org/"
[2026-02-07 17:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 17:32:59] 
[2026-02-07 17:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 17:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 17:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 17:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 17:32:59] 
[2026-02-07 17:32:59] 2026-02-07 16:32:27,763 | INFO     | **************************************
[2026-02-07 17:32:59] 2026-02-07 16:32:28,266 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-02-07 17:32:59] 2026-02-07 16:32:28,288 | INFO     | sufficient remaining disk space (1662374641664 B)
[2026-02-07 17:32:59] 2026-02-07 16:32:28,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 17:32:59] 2026-02-07 16:32:28,288 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 17:32:59] 2026-02-07 16:32:28,288 | INFO     | update_server=False
[2026-02-07 17:32:59] 2026-02-07 16:32:28,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 17:32:59] 2026-02-07 16:32:28,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:32:59] 2026-02-07 16:32:28,289 | INFO     | aborting loop
[2026-02-07 17:32:59] 2026-02-07 16:32:28,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 17:32:59] 2026-02-07 16:32:28,468 | INFO     | all job control threads have been joined
[2026-02-07 17:32:59] 2026-02-07 16:32:28,677 | INFO     | all data control threads have been joined
[2026-02-07 17:32:59] 2026-02-07 16:32:29,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 17:32:59] 2026-02-07 16:32:29,270 | INFO     | all payload control threads have been joined
[2026-02-07 17:32:59] 2026-02-07 16:32:29,293 | INFO     | [job] retrieve thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:29,294 | INFO     | [job] job monitor thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:29,413 | INFO     | [payload] validate_post thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:29,414 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:29,434 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:29,473 | INFO     | [job] control thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:29,684 | INFO     | [data] control thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,031 | INFO     | [job] validate thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,211 | INFO     | [payload] failed_post thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,265 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,277 | INFO     | [payload] control thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,295 | INFO     | [data] copytool_out thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,389 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:30,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:32:59] 2026-02-07 16:32:30,786 | INFO     | [data] copytool_in thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:31,639 | INFO     | [job] queue monitor thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:33,186 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 17:32:59] 2026-02-07 16:32:53,045 | INFO     | [monitor] cgroup control has ended
[2026-02-07 17:32:59] 2026-02-07 16:32:53,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140063871731520)>', '<ExcThread(monitor, started 140063480461056)>']
[2026-02-07 17:32:59] 2026-02-07 16:32:58,403 | INFO     | all workflow threads have been joined
[2026-02-07 17:32:59] 2026-02-07 16:32:58,403 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 17:32:59] 2026-02-07 16:32:58,404 | INFO     | traces error code: 0
[2026-02-07 17:32:59] 2026-02-07 16:32:58,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 17:32:59] 2026-02-07 16:32:59,305 | INFO     | PID=1762333 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 17:32:59] 2026-02-07 16:32:59,306 | INFO     | .. there are 20 such processes running
[2026-02-07 17:32:59] 2026-02-07 16:32:59,306 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 17:32:59] 2026-02-07 16:32:59,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 17:32:59] 2026-02-07 16:32:59,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 17:32:59] 2026-02-07 16:32:59,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 17:32:59] 2026-02-07 16:32:59,306 | INFO     | [monitor] control thread has ended
[2026-02-07 17:32:59] 2026-02-07 16:32:59,466 [wrapper] ==== pilot stdout END ====
[2026-02-07 17:32:59] 2026-02-07 16:32:59,470 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 17:32:59] 2026-02-07 16:32:59,473 [wrapper] pilotpid: 1762333
[2026-02-07 17:32:59] 2026-02-07 16:32:59,475 [wrapper] Pilot exit status: 0
[2026-02-07 17:32:59] 2026-02-07 16:32:59,491 [wrapper] pandaids: 7004057759
[2026-02-07 17:32:59] 2026-02-07 16:32:59,591 [wrapper] cleanup supervisor_pilot 1905346 1762334
[2026-02-07 17:32:59] 2026-02-07 16:32:59,596 [wrapper] Test setup, not cleaning
[2026-02-07 17:32:59] 2026-02-07 16:32:59,600 [wrapper] apfmon messages muted
[2026-02-07 17:32:59] 2026-02-07 16:32:59,605 [wrapper] ==== wrapper stdout END ====
[2026-02-07 17:32:59] 2026-02-07 16:32:59,611 [wrapper] ==== wrapper stderr END ====
[2026-02-07 17:32:59]  *** Error codes and diagnostics ***
[2026-02-07 17:32:59]     "exeErrorCode": 0,
[2026-02-07 17:32:59]     "exeErrorDiag": "",
[2026-02-07 17:32:59]     "pilotErrorCode": 0,
[2026-02-07 17:32:59]     "pilotErrorDiag": "",
[2026-02-07 17:32:59]  *** Listing of results directory ***
[2026-02-07 17:32:59] total 945840
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-07 17:32:59] -rwx------ 1 boinc boinc     36322 Feb  6 17:59 runpilot2-wrapper.sh
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc      5111 Feb  6 18:00 queuedata.json
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc       100 Feb  7 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 17:32:59] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 16:03 run_atlas
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc       105 Feb  7 16:03 job.xml
[2026-02-07 17:32:59] -rw-r--r-- 2 boinc boinc 678760933 Feb  7 16:03 EVNT.48431094._000277.pool.root.1
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc      6676 Feb  7 16:03 init_data.xml
[2026-02-07 17:32:59] -rw-r--r-- 2 boinc boinc     15845 Feb  7 16:03 start_atlas.sh
[2026-02-07 17:32:59] drwxrwx--x 2 boinc boinc      4096 Feb  7 16:03 shared
[2026-02-07 17:32:59] -rw-r--r-- 2 boinc boinc    597957 Feb  7 16:03 input.tar.gz
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc         0 Feb  7 16:03 boinc_lockfile
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc      2554 Feb  7 16:03 pandaJob.out
[2026-02-07 17:32:59] -rw------- 1 boinc boinc   1009502 Feb  7 16:03 agis_schedconf.cvmfs.json
[2026-02-07 17:32:59] -rw------- 1 boinc boinc   1513088 Feb  7 16:03 agis_ddmendpoints.agis.ALL.json
[2026-02-07 17:32:59] -rw------- 1 boinc boinc       436 Feb  7 16:03 workernode_map.json
[2026-02-07 17:32:59] drwx------ 5 boinc boinc      4096 Feb  7 16:03 pilot3
[2026-02-07 17:32:59] -rw------- 1 boinc boinc 283458373 Feb  7 17:31 HITS.48431096._006432.pool.root.1
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc       531 Feb  7 17:31 boinc_task_state.xml
[2026-02-07 17:32:59] -rw------- 1 boinc boinc        95 Feb  7 17:32 pilot_heartbeat.json
[2026-02-07 17:32:59] -rw------- 1 boinc boinc      1023 Feb  7 17:32 memory_monitor_summary.json
[2026-02-07 17:32:59] -rw------- 1 boinc boinc    428902 Feb  7 17:32 log.48431096._006432.job.log.tgz.1
[2026-02-07 17:32:59] -rw------- 1 boinc boinc      6342 Feb  7 17:32 heartbeat.json
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc      8192 Feb  7 17:32 boinc_mmap_file
[2026-02-07 17:32:59] -rw------- 1 boinc boinc       823 Feb  7 17:32 pilotlog.txt
[2026-02-07 17:32:59] -rw------- 1 boinc boinc    763198 Feb  7 17:32 log.48431096._006432.job.log.1
[2026-02-07 17:32:59] -rw------- 1 boinc boinc       357 Feb  7 17:32 output.list
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc        27 Feb  7 17:32 wrapper_checkpoint.txt
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc       620 Feb  7 17:32 runtime_log
[2026-02-07 17:32:59] -rw------- 1 boinc boinc   1208320 Feb  7 17:32 result.tar.gz
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc      8879 Feb  7 17:32 runtime_log.err
[2026-02-07 17:32:59] -rw------- 1 boinc boinc       664 Feb  7 17:32 cweKDmfMe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHNZKDmAh2nGo.diag
[2026-02-07 17:32:59] -rw-r--r-- 1 boinc boinc     21470 Feb  7 17:32 stderr.txt
[2026-02-07 17:32:59] HITS file was successfully produced:
[2026-02-07 17:32:59] -rw------- 1 boinc boinc 283458373 Feb  7 17:31 shared/HITS.pool.root.1
[2026-02-07 17:32:59]  *** Contents of shared directory: ***
[2026-02-07 17:32:59] total 941460
[2026-02-07 17:32:59] -rw-r--r-- 2 boinc boinc 678760933 Feb  7 16:03 ATLAS.root_0
[2026-02-07 17:32:59] -rw-r--r-- 2 boinc boinc     15845 Feb  7 16:03 start_atlas.sh
[2026-02-07 17:32:59] -rw-r--r-- 2 boinc boinc    597957 Feb  7 16:03 input.tar.gz
[2026-02-07 17:32:59] -rw------- 1 boinc boinc 283458373 Feb  7 17:31 HITS.pool.root.1
[2026-02-07 17:32:59] -rw------- 1 boinc boinc   1208320 Feb  7 17:32 result.tar.gz
17:33:01 (1758114): run_atlas exited; CPU time 55584.198745
17:33:01 (1758114): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN