Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:57 (16140): wrapper (7.7.26015): starting
09:55:57 (16140): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 09:55:57] Arguments: --nthreads 8
[2026-02-07 09:55:57] Threads: 8
[2026-02-07 09:55:57] Checking for CVMFS
[2026-02-07 09:55:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 09:55:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 09:55:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 09:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 09:55:57] 2.11.2.0 2964 67576 98268 155986 3 50 18089410 20275201 1 130560 0 16414514 99.747 6298498 26971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 09:55:57] CVMFS is ok
[2026-02-07 09:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 09:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 09:55:57] Further information can be found at the LHC@home message board.
[2026-02-07 09:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 09:55:57] Checking for apptainer binary...
[2026-02-07 09:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 09:55:57] Running /usr/bin/apptainer --version
[2026-02-07 09:55:57] apptainer version 1.3.2-1.el7
[2026-02-07 09:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 09:55:59] c-204-16.aglt2.org
[2026-02-07 09:55:59] apptainer works
[2026-02-07 09:55:59] Set ATHENA_PROC_NUMBER=8
[2026-02-07 09:55:59] Set ATHENA_CORE_NUMBER=8
[2026-02-07 09:55:59] Starting ATLAS job with PandaID=7000144993
[2026-02-07 09:55:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 12:02:41]  *** The last 200 lines of the pilot log: ***
[2026-02-07 12:02:41] 2026-02-07 17:01:50,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 12:02:41] 2026-02-07 17:01:50,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 12:02:41] 2026-02-07 17:01:50,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 12:02:41] 2026-02-07 17:01:50,426 | INFO     | fitting pss+swap vs Time
[2026-02-07 12:02:41] 2026-02-07 17:01:50,426 | INFO     | sum of square deviations: 576985702.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,427 | INFO     | sum of deviations: 19753685998.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,427 | INFO     | mean x: 1770479930.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,427 | INFO     | mean y: 2482709.4471544717
[2026-02-07 12:02:41] 2026-02-07 17:01:50,427 | INFO     | intersect: -60611678927.05908
[2026-02-07 12:02:41] 2026-02-07 17:01:50,428 | INFO     | chi2: 1.311875624996865
[2026-02-07 12:02:41] 2026-02-07 17:01:50,428 | INFO     | sum of square deviations: 509440249.5
[2026-02-07 12:02:41] 2026-02-07 17:01:50,428 | INFO     | sum of deviations: 18750812752.999996
[2026-02-07 12:02:41] 2026-02-07 17:01:50,428 | INFO     | mean x: 1770479777.5
[2026-02-07 12:02:41] 2026-02-07 17:01:50,429 | INFO     | mean y: 2480444.118644068
[2026-02-07 12:02:41] 2026-02-07 17:01:50,429 | INFO     | intersect: -65163031749.8204
[2026-02-07 12:02:41] 2026-02-07 17:01:50,429 | INFO     | chi2: 1.3131955427676445
[2026-02-07 12:02:41] 2026-02-07 17:01:50,429 | INFO     | current chi2=1.3131955427676445 (change=-0.10061302654225306 %)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,429 | INFO     | right removable region: 117
[2026-02-07 12:02:41] 2026-02-07 17:01:50,430 | INFO     | sum of square deviations: 509440249.5
[2026-02-07 12:02:41] 2026-02-07 17:01:50,430 | INFO     | sum of deviations: 3003336342.0000005
[2026-02-07 12:02:41] 2026-02-07 17:01:50,430 | INFO     | mean x: 1770480082.5
[2026-02-07 12:02:41] 2026-02-07 17:01:50,430 | INFO     | mean y: 2519753.9322033897
[2026-02-07 12:02:41] 2026-02-07 17:01:50,430 | INFO     | intersect: -10435106993.813429
[2026-02-07 12:02:41] 2026-02-07 17:01:50,431 | INFO     | chi2: 0.010069749381761603
[2026-02-07 12:02:41] 2026-02-07 17:01:50,431 | INFO     | current chi2=0.010069749381761603 (change=99.23241584873675 %)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,431 | INFO     | sum of square deviations: 447383272.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,432 | INFO     | sum of deviations: 2686643252.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,432 | INFO     | mean x: 1770480235.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,432 | INFO     | mean y: 2520562.902654867
[2026-02-07 12:02:41] 2026-02-07 17:01:50,432 | INFO     | intersect: -10629635518.610657
[2026-02-07 12:02:41] 2026-02-07 17:01:50,432 | INFO     | chi2: 0.0005949192004391661
[2026-02-07 12:02:41] 2026-02-07 17:01:50,432 | INFO     | current chi2=0.0005949192004391661 (change=94.0920158200095 %)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,433 | INFO     | sum of square deviations: 390582207.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,433 | INFO     | sum of deviations: 2063089540.0000002
[2026-02-07 12:02:41] 2026-02-07 17:01:50,433 | INFO     | mean x: 1770480387.5
[2026-02-07 12:02:41] 2026-02-07 17:01:50,433 | INFO     | mean y: 2522225.703703704
[2026-02-07 12:02:41] 2026-02-07 17:01:50,434 | INFO     | intersect: -9349310763.007935
[2026-02-07 12:02:41] 2026-02-07 17:01:50,434 | INFO     | chi2: 0.0002578697897553716
[2026-02-07 12:02:41] 2026-02-07 17:01:50,434 | INFO     | current chi2=0.0002578697897553716 (change=56.65465334367868 %)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,434 | INFO     | sum of square deviations: 338804492.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,435 | INFO     | sum of deviations: 1712365160.0000002
[2026-02-07 12:02:41] 2026-02-07 17:01:50,435 | INFO     | mean x: 1770480540.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,435 | INFO     | mean y: 2523260.1165048545
[2026-02-07 12:02:41] 2026-02-07 17:01:50,435 | INFO     | intersect: -8945732340.797981
[2026-02-07 12:02:41] 2026-02-07 17:01:50,435 | INFO     | chi2: 0.0002353835296264626
[2026-02-07 12:02:41] 2026-02-07 17:01:50,435 | INFO     | current chi2=0.0002353835296264626 (change=8.720005608350096 %)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,436 | INFO     | left removable region: 40
[2026-02-07 12:02:41] 2026-02-07 17:01:50,436 | INFO     | sum of square deviations: 141539398.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,436 | INFO     | sum of deviations: 531002803.99999994
[2026-02-07 12:02:41] 2026-02-07 17:01:50,436 | INFO     | mean x: 1770480967.0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,436 | INFO     | mean y: 2526419.012987013
[2026-02-07 12:02:41] 2026-02-07 17:01:50,436 | INFO     | intersect: -6639654989.061332
[2026-02-07 12:02:41] 2026-02-07 17:01:50,437 | INFO     | chi2: 9.64744715068692e-05
[2026-02-07 12:02:41] 2026-02-07 17:01:50,437 | INFO     | current memory leak: 3.75 B/s (using 77 data points, chi2=0.00)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,437 | INFO     | could have reported an average CPU frequency of 1695 MHz (8 samples)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,437 | INFO     | ..............................
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . Timing measurements:
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . get job = 0 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . initial setup = 8 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . payload setup = 8 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . stage-in = 0 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . payload execution = 7499 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . stage-out = 0 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | . log creation = 0 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,438 | INFO     | ..............................
[2026-02-07 12:02:41] 2026-02-07 17:01:50,529 | INFO     | 
[2026-02-07 12:02:41] 2026-02-07 17:01:50,529 | INFO     | job summary report
[2026-02-07 12:02:41] 2026-02-07 17:01:50,529 | INFO     | --------------------------------------------------
[2026-02-07 12:02:41] 2026-02-07 17:01:50,530 | INFO     | PanDA job id: 7000144993
[2026-02-07 12:02:41] 2026-02-07 17:01:50,530 | INFO     | task id: 48466714
[2026-02-07 12:02:41] 2026-02-07 17:01:50,530 | INFO     | errors: (none)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,530 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 12:02:41] 2026-02-07 17:01:50,530 | INFO     | pilot state: finished 
[2026-02-07 12:02:41] 2026-02-07 17:01:50,530 | INFO     | transexitcode: 0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,531 | INFO     | exeerrorcode: 0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,531 | INFO     | exeerrordiag: 
[2026-02-07 12:02:41] 2026-02-07 17:01:50,531 | INFO     | exitcode: 0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,531 | INFO     | exitmsg: OK
[2026-02-07 12:02:41] 2026-02-07 17:01:50,531 | INFO     | cpuconsumptiontime: 56228 s
[2026-02-07 12:02:41] 2026-02-07 17:01:50,531 | INFO     | nevents: 400
[2026-02-07 12:02:41] 2026-02-07 17:01:50,532 | INFO     | neventsw: 0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,532 | INFO     | pid: 24348
[2026-02-07 12:02:41] 2026-02-07 17:01:50,532 | INFO     | pgrp: 24348
[2026-02-07 12:02:41] 2026-02-07 17:01:50,532 | INFO     | corecount: 8
[2026-02-07 12:02:41] 2026-02-07 17:01:50,532 | INFO     | event service: False
[2026-02-07 12:02:41] 2026-02-07 17:01:50,532 | INFO     | sizes: {0: 2282573, 1: 2283034, 11: 2283034, 7512: 2310568, 7514: 2319622, 7517: 2319760}
[2026-02-07 12:02:41] 2026-02-07 17:01:50,533 | INFO     | --------------------------------------------------
[2026-02-07 12:02:41] 2026-02-07 17:01:50,533 | INFO     | 
[2026-02-07 12:02:41] 2026-02-07 17:01:50,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 12:02:41] 2026-02-07 17:01:50,560 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,561 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,564 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,564 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 12:02:41] 2026-02-07 17:01:50,565 | INFO     | job 7000144993 has completed (purged errors)
[2026-02-07 12:02:41] 2026-02-07 17:01:50,565 | INFO     | overall cleanup function is called
[2026-02-07 12:02:41] 2026-02-07 17:01:51,572 | INFO     | --- collectZombieJob: --- 10, [24348]
[2026-02-07 12:02:41] 2026-02-07 17:01:51,573 | INFO     | zombie collector waiting for pid 24348
[2026-02-07 12:02:41] 2026-02-07 17:01:51,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 12:02:41] 2026-02-07 17:01:51,573 | INFO     | collected zombie processes
[2026-02-07 12:02:41] 2026-02-07 17:01:51,574 | INFO     | will attempt to kill all subprocesses of pid=24348
[2026-02-07 12:02:41] 2026-02-07 17:01:51,663 | INFO     | process IDs to be killed: [24348] (in reverse order)
[2026-02-07 12:02:41] 2026-02-07 17:01:51,723 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 12:02:41] 2026-02-07 17:01:51,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 12:02:41] 2026-02-07 17:01:51,728 | INFO     | did not find any defunct processes belonging to 24348
[2026-02-07 12:02:41] 2026-02-07 17:01:51,731 | INFO     | did not find any defunct processes belonging to 24348
[2026-02-07 12:02:41] 2026-02-07 17:01:51,732 | INFO     | ready for new job
[2026-02-07 12:02:41] 2026-02-07 17:01:51,732 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 12:02:41] 2026-02-07 17:01:51,734 | INFO     | **************************************
[2026-02-07 12:02:41] 2026-02-07 17:01:51,734 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 12:02:41] 2026-02-07 17:01:51,734 | INFO     | **************************************
[2026-02-07 12:02:41] 2026-02-07 17:01:51,734 | INFO     | 
[2026-02-07 12:02:41] 2026-02-07 17:01:51,735 | INFO     | architecture information:
[2026-02-07 12:02:41] 2026-02-07 17:01:51,736 | INFO     | executing command: cat /etc/os-release
[2026-02-07 12:02:41] 2026-02-07 17:01:51,754 | INFO     | cat /etc/os-release:
[2026-02-07 12:02:41] NAME="CentOS Linux"
[2026-02-07 12:02:41] VERSION="7 (Core)"
[2026-02-07 12:02:41] ID="centos"
[2026-02-07 12:02:41] ID_LIKE="rhel fedora"
[2026-02-07 12:02:41] VERSION_ID="7"
[2026-02-07 12:02:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 12:02:41] ANSI_COLOR="0;31"
[2026-02-07 12:02:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 12:02:41] HOME_URL="https://www.centos.org/"
[2026-02-07 12:02:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 12:02:41] 
[2026-02-07 12:02:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 12:02:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 12:02:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 12:02:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 12:02:41] 
[2026-02-07 12:02:41] 2026-02-07 17:01:51,754 | INFO     | **************************************
[2026-02-07 12:02:41] 2026-02-07 17:01:52,257 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 12:02:41] 2026-02-07 17:01:52,274 | INFO     | sufficient remaining disk space (18058575872 B)
[2026-02-07 12:02:41] 2026-02-07 17:01:52,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 12:02:41] 2026-02-07 17:01:52,275 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 12:02:41] 2026-02-07 17:01:52,275 | INFO     | update_server=False
[2026-02-07 12:02:41] 2026-02-07 17:01:52,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 12:02:41] 2026-02-07 17:01:52,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 12:02:41] 2026-02-07 17:01:52,276 | INFO     | aborting loop
[2026-02-07 12:02:41] 2026-02-07 17:01:52,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 12:02:41] 2026-02-07 17:01:52,524 | INFO     | all data control threads have been joined
[2026-02-07 12:02:41] 2026-02-07 17:01:53,006 | INFO     | all job control threads have been joined
[2026-02-07 12:02:41] 2026-02-07 17:01:53,281 | INFO     | [job] retrieve thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,282 | INFO     | [job] job monitor thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,283 | INFO     | [job] queue monitor thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,321 | INFO     | all payload control threads have been joined
[2026-02-07 12:02:41] 2026-02-07 17:01:53,530 | INFO     | [data] control thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,594 | INFO     | [payload] validate_post thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,672 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,706 | INFO     | [job] validate thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:53,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 12:02:41] 2026-02-07 17:01:54,008 | INFO     | [job] control thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:54,042 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:54,081 | INFO     | [data] copytool_in thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:54,103 | INFO     | [payload] failed_post thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:54,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 12:02:41] 2026-02-07 17:01:54,326 | INFO     | [payload] control thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:54,578 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:55,723 | INFO     | [data] copytool_out thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:01:58,309 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:02:03,208 | INFO     | job.realtimelogging is not enabled
[2026-02-07 12:02:41] 2026-02-07 17:02:04,213 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 12:02:41] 2026-02-07 17:02:22,905 | INFO     | PID=19957 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 12:02:41] 2026-02-07 17:02:22,906 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 12:02:41] 2026-02-07 17:02:22,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 12:02:41] 2026-02-07 17:02:22,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 12:02:41] 2026-02-07 17:02:34,250 | INFO     | [monitor] cgroup control has ended
[2026-02-07 12:02:41] 2026-02-07 17:02:35,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240064911168)>', '<ExcThread(monitor, started 140238793991936)>']
[2026-02-07 12:02:41] 2026-02-07 17:02:35,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 12:02:41] 2026-02-07 17:02:35,961 | INFO     | [monitor] control thread has ended
[2026-02-07 12:02:41] 2026-02-07 17:02:40,693 | INFO     | all workflow threads have been joined
[2026-02-07 12:02:41] 2026-02-07 17:02:40,694 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 12:02:41] 2026-02-07 17:02:40,694 | INFO     | traces error code: 0
[2026-02-07 12:02:41] 2026-02-07 17:02:40,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 12:02:41] 2026-02-07 17:02:40,824 [wrapper] ==== pilot stdout END ====
[2026-02-07 12:02:41] 2026-02-07 17:02:40,829 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 12:02:41] 2026-02-07 17:02:40,834 [wrapper] pilotpid: 19957
[2026-02-07 12:02:41] 2026-02-07 17:02:40,839 [wrapper] Pilot exit status: 0
[2026-02-07 12:02:41] 2026-02-07 17:02:40,857 [wrapper] pandaids: 7000144993
[2026-02-07 12:02:41] 2026-02-07 17:02:40,912 [wrapper] cleanup supervisor_pilot  9548 19958
[2026-02-07 12:02:41] 2026-02-07 17:02:40,917 [wrapper] Test setup, not cleaning
[2026-02-07 12:02:41] 2026-02-07 17:02:40,922 [wrapper] apfmon messages muted
[2026-02-07 12:02:41] 2026-02-07 17:02:40,927 [wrapper] ==== wrapper stdout END ====
[2026-02-07 12:02:41] 2026-02-07 17:02:40,932 [wrapper] ==== wrapper stderr END ====
[2026-02-07 12:02:41]  *** Error codes and diagnostics ***
[2026-02-07 12:02:41]     "exeErrorCode": 0,
[2026-02-07 12:02:41]     "exeErrorDiag": "",
[2026-02-07 12:02:41]     "pilotErrorCode": 0,
[2026-02-07 12:02:41]     "pilotErrorDiag": "",
[2026-02-07 12:02:41]  *** Listing of results directory ***
[2026-02-07 12:02:41] total 719536
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 04:20 pilot3.tar.gz
[2026-02-07 12:02:41] -rwx------ 1 boincer umatlas     36322 Feb  7 04:24 runpilot2-wrapper.sh
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 04:27 queuedata.json
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas       100 Feb  7 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 12:02:41] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 09:55 run_atlas
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas       105 Feb  7 09:55 job.xml
[2026-02-07 12:02:41] -rw-r--r-- 2 boincer umatlas 530750395 Feb  7 09:55 EVNT.48466711._000028.pool.root.1
[2026-02-07 12:02:41] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 09:55 start_atlas.sh
[2026-02-07 12:02:41] drwxrwx--x 2 boincer umatlas      4096 Feb  7 09:55 shared
[2026-02-07 12:02:41] -rw-r--r-- 2 boincer umatlas    597938 Feb  7 09:55 input.tar.gz
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas         0 Feb  7 09:55 boinc_lockfile
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas      2499 Feb  7 09:55 pandaJob.out
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas        57 Feb  7 09:56 setup.sh.local
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas   1009502 Feb  7 09:56 agis_schedconf.cvmfs.json
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas   1513088 Feb  7 09:56 agis_ddmendpoints.agis.ALL.json
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas       433 Feb  7 09:56 workernode_map.json
[2026-02-07 12:02:41] drwx------ 5 boincer umatlas      4096 Feb  7 09:56 pilot3
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas 199170240 Feb  7 12:01 HITS.48466714._001394.pool.root.1
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas       530 Feb  7 12:01 boinc_task_state.xml
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas      1048 Feb  7 12:01 memory_monitor_summary.json
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas    403198 Feb  7 12:01 log.48466714._001394.job.log.tgz.1
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas      6397 Feb  7 12:01 heartbeat.json
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas        95 Feb  7 12:02 pilot_heartbeat.json
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas      5910 Feb  7 12:02 init_data.xml
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 12:02 boinc_mmap_file
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas        27 Feb  7 12:02 wrapper_checkpoint.txt
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas      4814 Feb  7 12:02 pilotlog.txt
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas   1066674 Feb  7 12:02 log.48466714._001394.job.log.1
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas       357 Feb  7 12:02 output.list
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas       620 Feb  7 12:02 runtime_log
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas   1484800 Feb  7 12:02 result.tar.gz
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas      9341 Feb  7 12:02 runtime_log.err
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas       658 Feb  7 12:02 5jjKDm0it88n9Rq4apOajLDm4fhM0noT9bVooX4SDmOjaKDmDZdMGo.diag
[2026-02-07 12:02:41] -rw-r--r-- 1 boincer umatlas     20856 Feb  7 12:02 stderr.txt
[2026-02-07 12:02:41] HITS file was successfully produced:
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas 199170240 Feb  7 12:01 shared/HITS.pool.root.1
[2026-02-07 12:02:41]  *** Contents of shared directory: ***
[2026-02-07 12:02:41] total 714876
[2026-02-07 12:02:41] -rw-r--r-- 2 boincer umatlas 530750395 Feb  7 09:55 ATLAS.root_0
[2026-02-07 12:02:41] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 09:55 start_atlas.sh
[2026-02-07 12:02:41] -rw-r--r-- 2 boincer umatlas    597938 Feb  7 09:55 input.tar.gz
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas 199170240 Feb  7 12:01 HITS.pool.root.1
[2026-02-07 12:02:41] -rw------- 1 boincer umatlas   1484800 Feb  7 12:02 result.tar.gz
12:02:42 (16140): run_atlas exited; CPU time 56191.128106
12:02:42 (16140): called boinc_finish(0)

</stderr_txt>
]]>

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