Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:11:24 (610465): wrapper (7.7.26015): starting
06:11:24 (610465): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 06:11:24] Arguments: --nthreads 12
[2026-02-07 06:11:24] Threads: 12
[2026-02-07 06:11:24] Checking for CVMFS
[2026-02-07 06:11:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:11:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:11:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:11:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:11:25] 2.11.5.0 1525032 98420 242372 155985 0 855 26287932 45568001 26794 130560 0 847350742 99.831 500856236 19853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-02-07 06:11:25] CVMFS is ok
[2026-02-07 06:11:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 06:11:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 06:11:25] Further information can be found at the LHC@home message board.
[2026-02-07 06:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:11:25] Checking for apptainer binary...
[2026-02-07 06:11:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:11:25] Running /usr/bin/apptainer --version
[2026-02-07 06:11:25] apptainer version 1.4.1-1.el9
[2026-02-07 06:11:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:11:25] wns0053.triumf.lcg
[2026-02-07 06:11:25] apptainer works
[2026-02-07 06:11:25] Set ATHENA_PROC_NUMBER=12
[2026-02-07 06:11:25] Set ATHENA_CORE_NUMBER=12
[2026-02-07 06:11:25] Starting ATLAS job with PandaID=7000488784
[2026-02-07 06:11:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 06:15:48]  *** The last 200 lines of the pilot log: ***
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | could have reported an average CPU frequency of 2632 MHz (4 samples)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | ..............................
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . Timing measurements:
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . get job = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . initial setup = 10 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . payload setup = 10 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . stage-in = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . payload execution = 34 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . stage-out = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . log creation = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | ..............................
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000488784/pilotlog.txt
[2026-02-07 06:15:48] 2026-02-07 14:14:41,537 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 06:15:48] - Log from pilotlog.txt -
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | found no stored workdir sizes
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | INFO     | will not add max space = 0 B to job metrics
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | WARNING  | wrong length of table data, x=[1770473533.0], y=[2520.0] (must be same and length>=4)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | could have reported an average CPU frequency of 2632 MHz (4 samples)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | ..............................
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . Timing measurements:
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . get job = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . initial setup = 10 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . payload setup = 10 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . stage-in = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . payload execution = 34 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . stage-out = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . log creation = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | ..............................
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000488784/pilotlog.txt
[2026-02-07 06:15:48] 2026-02-07 14:14:41,538 | WARNING  | 
[2026-02-07 06:15:48] [begin log extracts]
[2026-02-07 06:15:48] - Log from pilotlog.txt -
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | WARNING  | found no stored workdir sizes
[2026-02-07 06:15:48] 2026-02-07 14:14:41,520 | INFO     | will not add max space = 0 B to job metrics
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | WARNING  | wrong length of table data, x=[1770473533.0], y=[2520.0] (must be same and length>=4)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | could have reported an average CPU frequency of 2632 MHz (4 samples)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | ..............................
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . Timing measurements:
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . get job = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . initial setup = 10 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . payload setup = 10 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . stage-in = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . payload execution = 34 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . stage-out = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,521 | INFO     | . log creation = 0 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | ..............................
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 06:15:48] 2026-02-07 14:14:41,522 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000488784/pilotlog.txt
[2026-02-07 06:15:48] [end log extracts]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,538 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,538 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | 
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | job summary report
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | --------------------------------------------------
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | PanDA job id: 7000488784
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | task id: 48318034
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 06:12:33,941 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | pilot state: failed 
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | transexitcode: 65
[2026-02-07 06:15:48] 2026-02-07 14:14:41,857 | INFO     | exeerrorcode: 65
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | exitcode: 65
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | cpuconsumptiontime: 13 s
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | nevents: 0
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | neventsw: 0
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | pid: 620716
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | pgrp: 620716
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | corecount: 12
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | event service: False
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | sizes: {0: 2283053, 11: 2283053, 48: 2306305, 49: 2310625, 168: 2310763}
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | --------------------------------------------------
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | 
[2026-02-07 06:15:48] 2026-02-07 14:14:41,858 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 06:15:48] 2026-02-07 14:14:41,889 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,890 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 06:15:48] 2026-02-07 14:14:41,891 | INFO     | job 7000488784 has completed (purged errors)
[2026-02-07 06:15:48] 2026-02-07 14:14:41,891 | INFO     | overall cleanup function is called
[2026-02-07 06:15:48] 2026-02-07 14:14:42,434 | INFO     | PID=614128 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 06:15:48] 2026-02-07 14:14:42,434 | INFO     | .. there are 35 such processes running
[2026-02-07 06:15:48] 2026-02-07 14:14:42,898 | INFO     | --- collectZombieJob: --- 10, [620716]
[2026-02-07 06:15:48] 2026-02-07 14:14:42,898 | INFO     | zombie collector waiting for pid 620716
[2026-02-07 06:15:48] 2026-02-07 14:14:42,898 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 06:15:48] 2026-02-07 14:14:42,898 | INFO     | collected zombie processes
[2026-02-07 06:15:48] 2026-02-07 14:14:42,898 | INFO     | will attempt to kill all subprocesses of pid=620716
[2026-02-07 06:15:48] 2026-02-07 14:14:43,192 | INFO     | process IDs to be killed: [620716] (in reverse order)
[2026-02-07 06:15:48] 2026-02-07 14:14:43,314 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 06:15:48] 2026-02-07 14:14:43,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 06:15:48] 2026-02-07 14:14:43,333 | INFO     | did not find any defunct processes belonging to 620716
[2026-02-07 06:15:48] 2026-02-07 14:14:43,341 | INFO     | did not find any defunct processes belonging to 620716
[2026-02-07 06:15:48] 2026-02-07 14:14:43,341 | INFO     | ready for new job
[2026-02-07 06:15:48] 2026-02-07 14:14:43,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 06:15:48] 2026-02-07 14:14:43,343 | INFO     | **************************************
[2026-02-07 06:15:48] 2026-02-07 14:14:43,343 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 06:15:48] 2026-02-07 14:14:43,343 | INFO     | **************************************
[2026-02-07 06:15:48] 2026-02-07 14:14:43,343 | INFO     | 
[2026-02-07 06:15:48] 2026-02-07 14:14:43,345 | INFO     | architecture information:
[2026-02-07 06:15:48] 2026-02-07 14:14:43,345 | INFO     | executing command: cat /etc/os-release
[2026-02-07 06:15:48] 2026-02-07 14:14:43,417 | INFO     | cat /etc/os-release:
[2026-02-07 06:15:48] NAME="CentOS Linux"
[2026-02-07 06:15:48] VERSION="7 (Core)"
[2026-02-07 06:15:48] ID="centos"
[2026-02-07 06:15:48] ID_LIKE="rhel fedora"
[2026-02-07 06:15:48] VERSION_ID="7"
[2026-02-07 06:15:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 06:15:48] ANSI_COLOR="0;31"
[2026-02-07 06:15:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 06:15:48] HOME_URL="https://www.centos.org/"
[2026-02-07 06:15:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 06:15:48] 
[2026-02-07 06:15:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 06:15:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 06:15:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 06:15:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 06:15:48] 
[2026-02-07 06:15:48] 2026-02-07 14:14:43,417 | INFO     | **************************************
[2026-02-07 06:15:48] 2026-02-07 14:14:43,921 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 06:15:48] 2026-02-07 14:14:43,998 | INFO     | sufficient remaining disk space (1995657183232 B)
[2026-02-07 06:15:48] 2026-02-07 14:14:43,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 06:15:48] 2026-02-07 14:14:43,999 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 06:15:48] 2026-02-07 14:14:43,999 | INFO     | update_server=False
[2026-02-07 06:15:48] 2026-02-07 14:14:43,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 06:15:48] 2026-02-07 14:14:44,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 06:15:48] 2026-02-07 14:14:44,377 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 06:15:48] 2026-02-07 14:14:44,377 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 06:15:48] 2026-02-07 14:14:44,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 06:15:48] 2026-02-07 14:14:44,377 | INFO     | will abort loop
[2026-02-07 06:15:48] 2026-02-07 14:14:44,750 | INFO     | all payload control threads have been joined
[2026-02-07 06:15:48] 2026-02-07 14:14:44,980 | INFO     | all data control threads have been joined
[2026-02-07 06:15:48] 2026-02-07 14:14:45,012 | INFO     | [job] retrieve thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,029 | INFO     | [data] copytool_in thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,099 | INFO     | all job control threads have been joined
[2026-02-07 06:15:48] 2026-02-07 14:14:45,191 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,251 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,378 | INFO     | [payload] failed_post thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,383 | INFO     | [job] job monitor thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,756 | INFO     | [payload] control thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:45,986 | INFO     | [data] control thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,014 | INFO     | [data] copytool_out thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,063 | INFO     | [job] validate thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,105 | INFO     | [job] control thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,134 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,237 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,411 | INFO     | [payload] validate_post thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:46,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 06:15:48] 2026-02-07 14:14:46,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 06:15:48] 2026-02-07 14:14:47,614 | INFO     | [job] queue monitor thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:14:50,610 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 06:15:48] 2026-02-07 14:15:14,800 | INFO     | PID=614128 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 06:15:48] 2026-02-07 14:15:14,800 | INFO     | .. there are 35 such processes running
[2026-02-07 06:15:48] 2026-02-07 14:15:14,800 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 06:15:48] 2026-02-07 14:15:14,800 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 06:15:48] 2026-02-07 14:15:14,800 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 06:15:48] 2026-02-07 14:15:42,509 | INFO     | [monitor] cgroup control has ended
[2026-02-07 06:15:48] 2026-02-07 14:15:42,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590231660352)>', '<ExcThread(monitor, started 140589664278272)>']
[2026-02-07 06:15:48] 2026-02-07 14:15:42,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 06:15:48] 2026-02-07 14:15:42,973 | INFO     | [monitor] control thread has ended
[2026-02-07 06:15:48] 2026-02-07 14:15:47,783 | INFO     | all workflow threads have been joined
[2026-02-07 06:15:48] 2026-02-07 14:15:47,783 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 06:15:48] 2026-02-07 14:15:47,783 | INFO     | traces error code: 0
[2026-02-07 06:15:48] 2026-02-07 14:15:47,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 06:15:48] 2026-02-07 14:15:47,946 [wrapper] ==== pilot stdout END ====
[2026-02-07 06:15:48] 2026-02-07 14:15:47,948 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 06:15:48] 2026-02-07 14:15:47,950 [wrapper] pilotpid: 614128
[2026-02-07 06:15:48] 2026-02-07 14:15:47,952 [wrapper] Pilot exit status: 0
[2026-02-07 06:15:48] 2026-02-07 14:15:47,962 [wrapper] pandaids: 7000488784
[2026-02-07 06:15:48] 2026-02-07 14:15:48,013 [wrapper] cleanup supervisor_pilot  614134 614129
[2026-02-07 06:15:48] 2026-02-07 14:15:48,015 [wrapper] Test setup, not cleaning
[2026-02-07 06:15:48] 2026-02-07 14:15:48,017 [wrapper] apfmon messages muted
[2026-02-07 06:15:48] 2026-02-07 14:15:48,019 [wrapper] ==== wrapper stdout END ====
[2026-02-07 06:15:48] 2026-02-07 14:15:48,022 [wrapper] ==== wrapper stderr END ====
[2026-02-07 06:15:48]  *** Error codes and diagnostics ***
[2026-02-07 06:15:48]     "exeErrorCode": 65,
[2026-02-07 06:15:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 06:15:48]     "pilotErrorCode": 1305,
[2026-02-07 06:15:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 06:15:48]  *** Listing of results directory ***
[2026-02-07 06:15:48] total 495788
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc    584627 Feb  7 01:20 pilot3.tar.gz
[2026-02-07 06:15:48] -rwx------. 1 boinc boinc     36322 Feb  7 01:21 runpilot2-wrapper.sh
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc      5111 Feb  7 01:24 queuedata.json
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc       100 Feb  7 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 06:15:48] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 06:11 run_atlas
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc       105 Feb  7 06:11 job.xml
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc      6593 Feb  7 06:11 init_data.xml
[2026-02-07 06:15:48] -rw-r--r--. 2 boinc boinc 503537909 Feb  7 06:11 EVNT.48318032._000216.pool.root.1
[2026-02-07 06:15:48] -rw-r--r--. 2 boinc boinc     15845 Feb  7 06:11 start_atlas.sh
[2026-02-07 06:15:48] drwxrwx--x. 2 boinc boinc      4096 Feb  7 06:11 shared
[2026-02-07 06:15:48] -rw-r--r--. 2 boinc boinc    597952 Feb  7 06:11 input.tar.gz
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc         0 Feb  7 06:11 boinc_lockfile
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc      2538 Feb  7 06:11 pandaJob.out
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc   1009510 Feb  7 06:11 agis_schedconf.cvmfs.json
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc   1513088 Feb  7 06:11 agis_ddmendpoints.agis.ALL.json
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc       445 Feb  7 06:11 workernode_map.json
[2026-02-07 06:15:48] drwx------. 5 boinc boinc      4096 Feb  7 06:11 pilot3
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc       522 Feb  7 06:12 boinc_task_state.xml
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc       966 Feb  7 06:12 memory_monitor_summary.json
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc     21015 Feb  7 06:12 log.48318034._011403.job.log.tgz.1
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc        95 Feb  7 06:14 pilot_heartbeat.json
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc      7036 Feb  7 06:14 heartbeat.json
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc      8192 Feb  7 06:15 boinc_mmap_file
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc      5004 Feb  7 06:15 pilotlog.txt
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc        22 Feb  7 06:15 wrapper_checkpoint.txt
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc     82443 Feb  7 06:15 log.48318034._011403.job.log.1
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc       188 Feb  7 06:15 output.list
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc       620 Feb  7 06:15 runtime_log
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc    122880 Feb  7 06:15 result.tar.gz
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc      8635 Feb  7 06:15 runtime_log.err
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc       644 Feb  7 06:15 8rnLDmwgt88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0zaKDmeLPjrm.diag
[2026-02-07 06:15:48] -rw-r--r--. 1 boinc boinc     21716 Feb  7 06:15 stderr.txt
[2026-02-07 06:15:48] No HITS result produced
[2026-02-07 06:15:48]  *** Contents of shared directory: ***
[2026-02-07 06:15:48] total 492464
[2026-02-07 06:15:48] -rw-r--r--. 2 boinc boinc 503537909 Feb  7 06:11 ATLAS.root_0
[2026-02-07 06:15:48] -rw-r--r--. 2 boinc boinc     15845 Feb  7 06:11 start_atlas.sh
[2026-02-07 06:15:48] -rw-r--r--. 2 boinc boinc    597952 Feb  7 06:11 input.tar.gz
[2026-02-07 06:15:48] -rw-------. 1 boinc boinc    122880 Feb  7 06:15 result.tar.gz
06:15:49 (610465): run_atlas exited; CPU time 18.120181
06:15:49 (610465): called boinc_finish(0)

</stderr_txt>
]]>

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