Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:02:57 (1354459): wrapper (7.7.26015): starting
02:02:57 (1354459): wrapper: running run_atlas (--nthreads 3)
[2026-02-08 02:02:57] Arguments: --nthreads 3
[2026-02-08 02:02:57] Threads: 3
[2026-02-08 02:02:57] Checking for CVMFS
[2026-02-08 02:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-08 02:02:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-08 02:02:58] Running cvmfs_config stat atlas.cern.ch
[2026-02-08 02:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-08 02:02:58] 2.9.2.0 916499 2670 81740 156001 3 50 19598801 36864000 0 130560 0 1200839 99.984 100298 14590 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-08 02:02:58] CVMFS is ok
[2026-02-08 02:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 02:02:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 02:02:58] Further information can be found at the LHC@home message board.
[2026-02-08 02:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 02:02:58] Checking for apptainer binary...
[2026-02-08 02:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-08 02:02:58] Running /usr/bin/apptainer --version
[2026-02-08 02:02:58] apptainer version 1.4.1-1.1
[2026-02-08 02:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 02:02:58] thA325a
[2026-02-08 02:02:58] apptainer works
[2026-02-08 02:02:58] Set ATHENA_PROC_NUMBER=3
[2026-02-08 02:02:58] Set ATHENA_CORE_NUMBER=3
[2026-02-08 02:02:58] Starting ATLAS job with PandaID=7004224372
[2026-02-08 02:02:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 03:31:21]  *** The last 200 lines of the pilot log: ***
[2026-02-08 03:31:21] 2026-02-08 02:30:55,581 | WARNING  | process 1362927 can no longer be monitored (due to stat problems) - aborting
[2026-02-08 03:31:21] 2026-02-08 02:30:55,615 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 03:31:21] 2026-02-08 02:30:55,658 | INFO     | number of running child processes to parent process 1362927: 1
[2026-02-08 03:31:21] 2026-02-08 02:30:55,658 | INFO     | maximum number of monitored processes: 6
[2026-02-08 03:31:21] 2026-02-08 02:30:55,658 | INFO     | aborting job monitoring since job object (job id=7004224372) has expired
[2026-02-08 03:31:21] 2026-02-08 02:30:55,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 03:31:21] 2026-02-08 02:30:55,659 | INFO     | will abort loop
[2026-02-08 03:31:21] 2026-02-08 02:30:55,752 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 03:31:21] 2026-02-08 02:30:56,664 | INFO     | [job] job monitor thread has finished
[2026-02-08 03:31:21] 2026-02-08 02:31:01,924 | INFO     | job.realtimelogging is not enabled
[2026-02-08 03:31:21] 2026-02-08 02:31:02,929 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 03:31:21] 2026-02-08 02:31:14,019 | INFO     | [monitor] cgroup control has ended
[2026-02-08 03:31:21] 2026-02-08 02:31:15,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635935741760)>', '<ExcThread(monitor, started 139635065865984)>']
[2026-02-08 03:31:21] 2026-02-08 02:31:20,069 | INFO     | all workflow threads have been joined
[2026-02-08 03:31:21] 2026-02-08 02:31:20,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 03:31:21] 2026-02-08 02:31:20,069 | INFO     | traces error code: 0
[2026-02-08 03:31:21] 2026-02-08 02:31:20,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 03:31:21] 2026-02-08 02:31:21,753 | INFO     | PID=1358495 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 03:31:21] 2026-02-08 02:31:21,753 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 03:31:21] 2026-02-08 02:31:21,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 03:31:21] 2026-02-08 02:31:21,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 03:31:21] 2026-02-08 02:31:21,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 03:31:21] 2026-02-08 02:31:21,753 | INFO     | [monitor] control thread has ended
[2026-02-08 03:31:21] 2026-02-08 02:31:21,800 [wrapper] ==== pilot stdout END ====
[2026-02-08 03:31:21] 2026-02-08 02:31:21,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 03:31:21] 2026-02-08 02:31:21,805 [wrapper] pilotpid: 1358495
[2026-02-08 03:31:21] 2026-02-08 02:31:21,807 [wrapper] Pilot exit status: 0
[2026-02-08 03:31:21] 2026-02-08 02:31:21,814 [wrapper] pandaids: 7004224372
[2026-02-08 03:31:21] 2026-02-08 02:31:21,831 [wrapper] cleanup supervisor_pilot 1368539 1358496
[2026-02-08 03:31:21] 2026-02-08 02:31:21,833 [wrapper] Test setup, not cleaning
[2026-02-08 03:31:21] 2026-02-08 02:31:21,835 [wrapper] apfmon messages muted
[2026-02-08 03:31:21] 2026-02-08 02:31:21,837 [wrapper] ==== wrapper stdout END ====
[2026-02-08 03:31:21] 2026-02-08 02:31:21,839 [wrapper] ==== wrapper stderr END ====
[2026-02-08 03:31:21]  *** Error codes and diagnostics ***
[2026-02-08 03:31:21]     "exeErrorCode": 0,
[2026-02-08 03:31:21]     "exeErrorDiag": "",
[2026-02-08 03:31:21]     "pilotErrorCode": 0,
[2026-02-08 03:31:21]     "pilotErrorDiag": "",
[2026-02-08 03:31:21]  *** Listing of results directory ***
[2026-02-08 03:31:21] total 671956
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc      5111 Feb  6 17:59 queuedata.json
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-08 03:31:21] -rwx------ 1 boinc boinc     36322 Feb  6 17:59 runpilot2-wrapper.sh
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc       100 Feb  8 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 03:31:21] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 02:02 run_atlas
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc       105 Feb  8 02:02 job.xml
[2026-02-08 03:31:21] -rw-r--r-- 2 boinc boinc 496471350 Feb  8 02:02 EVNT.48317889._000283.pool.root.1
[2026-02-08 03:31:21] -rw-r--r-- 2 boinc boinc    597938 Feb  8 02:02 input.tar.gz
[2026-02-08 03:31:21] -rw-r--r-- 2 boinc boinc     15845 Feb  8 02:02 start_atlas.sh
[2026-02-08 03:31:21] drwxrwx--x 2 boinc boinc      4096 Feb  8 02:02 shared
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc         0 Feb  8 02:02 boinc_setup_complete
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc      6440 Feb  8 02:02 init_data.xml
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc         0 Feb  8 02:02 boinc_lockfile
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc      2522 Feb  8 02:02 pandaJob.out
[2026-02-08 03:31:21] -rw------- 1 boinc boinc   1009502 Feb  8 02:03 agis_schedconf.cvmfs.json
[2026-02-08 03:31:21] -rw------- 1 boinc boinc   1513088 Feb  8 02:03 agis_ddmendpoints.agis.ALL.json
[2026-02-08 03:31:21] -rw------- 1 boinc boinc       427 Feb  8 02:03 workernode_map.json
[2026-02-08 03:31:21] drwx------ 5 boinc boinc      4096 Feb  8 02:03 pilot3
[2026-02-08 03:31:21] -rw------- 1 boinc boinc 185658750 Feb  8 03:30 HITS.48317892._014988.pool.root.1
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc       530 Feb  8 03:30 boinc_task_state.xml
[2026-02-08 03:31:21] -rw------- 1 boinc boinc        95 Feb  8 03:30 pilot_heartbeat.json
[2026-02-08 03:31:21] -rw------- 1 boinc boinc      1019 Feb  8 03:30 memory_monitor_summary.json
[2026-02-08 03:31:21] -rw------- 1 boinc boinc    252660 Feb  8 03:30 log.48317892._014988.job.log.tgz.1
[2026-02-08 03:31:21] -rw------- 1 boinc boinc      6309 Feb  8 03:30 heartbeat.json
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc      8192 Feb  8 03:31 boinc_mmap_file
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc        27 Feb  8 03:31 wrapper_checkpoint.txt
[2026-02-08 03:31:21] -rw------- 1 boinc boinc       747 Feb  8 03:31 pilotlog.txt
[2026-02-08 03:31:21] -rw------- 1 boinc boinc    766757 Feb  8 03:31 log.48317892._014988.job.log.1
[2026-02-08 03:31:21] -rw------- 1 boinc boinc       357 Feb  8 03:31 output.list
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc       620 Feb  8 03:31 runtime_log
[2026-02-08 03:31:21] -rw------- 1 boinc boinc   1034240 Feb  8 03:31 result.tar.gz
[2026-02-08 03:31:21] -rw------- 1 boinc boinc       658 Feb  8 03:31 zTrKDmAMe88n9Rq4apOajLDm4fhM0noT9bVooX4SDmevYKDmOn2bHo.diag
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc      8901 Feb  8 03:31 runtime_log.err
[2026-02-08 03:31:21] -rw-r--r-- 1 boinc boinc      5943 Feb  8 03:31 stderr.txt
[2026-02-08 03:31:21] HITS file was successfully produced:
[2026-02-08 03:31:21] -rw------- 1 boinc boinc 185658750 Feb  8 03:30 shared/HITS.pool.root.1
[2026-02-08 03:31:21]  *** Contents of shared directory: ***
[2026-02-08 03:31:21] total 667760
[2026-02-08 03:31:21] -rw-r--r-- 2 boinc boinc 496471350 Feb  8 02:02 ATLAS.root_0
[2026-02-08 03:31:21] -rw-r--r-- 2 boinc boinc    597938 Feb  8 02:02 input.tar.gz
[2026-02-08 03:31:21] -rw-r--r-- 2 boinc boinc     15845 Feb  8 02:02 start_atlas.sh
[2026-02-08 03:31:21] -rw------- 1 boinc boinc 185658750 Feb  8 03:30 HITS.pool.root.1
[2026-02-08 03:31:21] -rw------- 1 boinc boinc   1034240 Feb  8 03:31 result.tar.gz
03:31:23 (1354459): run_atlas exited; CPU time 15111.082368
03:31:23 (1354459): called boinc_finish(0)

</stderr_txt>
]]>

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