Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
09:52:37 (3436374): wrapper (7.7.26015): starting
09:52:37 (3436374): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 09:52:37] Arguments: --nthreads 4
[2026-02-07 09:52:37] Threads: 4
[2026-02-07 09:52:37] Checking for CVMFS
[2026-02-07 09:52:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 09:52:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 09:52:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 09:52:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 09:52:38] 2.13.1.0 2692303 1431 84044 155977 0 188 8953512 10240000 951 130560 0 1569186 99.992 56402 271 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-07 09:52:38] CVMFS is ok
[2026-02-07 09:52:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 09:52:38] Checking for apptainer binary...
[2026-02-07 09:52:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 09:52:38] Running /usr/bin/apptainer --version
[2026-02-07 09:52:38] apptainer version 1.4.5
[2026-02-07 09:52:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 09:52:39] peachesvl
[2026-02-07 09:52:39] apptainer works
[2026-02-07 09:52:39] Set ATHENA_PROC_NUMBER=4
[2026-02-07 09:52:39] Set ATHENA_CORE_NUMBER=4
[2026-02-07 09:52:39] Starting ATLAS job with PandaID=6998620411
[2026-02-07 09:52:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 11:24:33]  *** The last 200 lines of the pilot log: ***
[2026-02-07 11:24:33]  is_tar=False
[2026-02-07 11:24:33]  lfn=log.48318010._011042.job.log.tgz.1
[2026-02-07 11:24:33]  mtime=0
[2026-02-07 11:24:33]  protocol_id=None
[2026-02-07 11:24:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 11:24:33]  replicas=None
[2026-02-07 11:24:33]  scope=mc23_13p6TeV
[2026-02-07 11:24:33]  status=None
[2026-02-07 11:24:33]  status_code=0
[2026-02-07 11:24:33]  storage_token=
[2026-02-07 11:24:33]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6998620411/log.48318010._011042.job.log.tgz.1
[2026-02-07 11:24:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/89/log.48318010._011042.job.log.tgz.1
[2026-02-07 11:24:33]  workdir=None
[2026-02-07 11:24:33] ]
[2026-02-07 11:24:33] 2026-02-07 10:23:59,210 | INFO     | transferring file log.48318010._011042.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6998620411/log.48318010._011042.job.log.tgz.1 to /var/li
[2026-02-07 11:24:33] 2026-02-07 10:23:59,211 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6998620411/log.48318010._011042.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-07 11:24:33] 2026-02-07 10:23:59,259 | INFO     | adding to output.list: log.48318010._011042.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/89/log.48318010._011042.job.log.tg
[2026-02-07 11:24:33] 2026-02-07 10:23:59,262 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 11:24:33] 2026-02-07 10:23:59,263 | INFO     | summary of transferred files:
[2026-02-07 11:24:33] 2026-02-07 10:23:59,263 | INFO     |  -- lfn=log.48318010._011042.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 11:24:33] 2026-02-07 10:23:59,264 | INFO     | stage-out finished correctly
[2026-02-07 11:24:33] 2026-02-07 10:23:59,971 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 11:24:33] 2026-02-07 10:24:00,044 | INFO     | job 6998620411 has state=finished
[2026-02-07 11:24:33] 2026-02-07 10:24:00,045 | INFO     | preparing for final server update for job 6998620411 in state='finished'
[2026-02-07 11:24:33] 2026-02-07 10:24:00,046 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6998620411/jobReport.json
[2026-02-07 11:24:33] 2026-02-07 10:24:00,051 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-02-07 11:24:33] 2026-02-07 10:24:00,051 | INFO     | this job has now completed (state=finished)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,052 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,053 | INFO     | log transfer has been attempted: DONE
[2026-02-07 11:24:33] 2026-02-07 10:24:00,053 | INFO     | job 6998620411 has finished - writing final server update
[2026-02-07 11:24:33] 2026-02-07 10:24:00,053 | INFO     | total number of processed events: 400 (read)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,069 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6998620411/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,073 | INFO     | extracted standard info from prmon json
[2026-02-07 11:24:33] 2026-02-07 10:24:00,075 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 11:24:33] 2026-02-07 10:24:00,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 11:24:33] 2026-02-07 10:24:00,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 11:24:33] 2026-02-07 10:24:00,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 11:24:33] 2026-02-07 10:24:00,081 | INFO     | fitting pss+swap vs Time
[2026-02-07 11:24:33] 2026-02-07 10:24:00,082 | INFO     | sum of square deviations: 170944600.5
[2026-02-07 11:24:33] 2026-02-07 10:24:00,082 | INFO     | sum of deviations: -3380392958.0
[2026-02-07 11:24:33] 2026-02-07 10:24:00,083 | INFO     | mean x: 1770457207.5
[2026-02-07 11:24:33] 2026-02-07 10:24:00,083 | INFO     | mean y: 2356849.951219512
[2026-02-07 11:24:33] 2026-02-07 10:24:00,083 | INFO     | intersect: 35012769926.28202
[2026-02-07 11:24:33] 2026-02-07 10:24:00,084 | INFO     | chi2: 0.022527051261868727
[2026-02-07 11:24:33] 2026-02-07 10:24:00,084 | INFO     | current memory leak: -19.77 B/s (using 82 data points, chi2=0.02)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,085 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,086 | INFO     | ..............................
[2026-02-07 11:24:33] 2026-02-07 10:24:00,086 | INFO     | . Timing measurements:
[2026-02-07 11:24:33] 2026-02-07 10:24:00,087 | INFO     | . get job = 0 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,088 | INFO     | . initial setup = 13 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,088 | INFO     | . payload setup = 14 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,088 | INFO     | . stage-in = 0 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,089 | INFO     | . payload execution = 5413 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,089 | INFO     | . stage-out = 0 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,090 | INFO     | . log creation = 0 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,090 | INFO     | ..............................
[2026-02-07 11:24:33] 2026-02-07 10:24:00,186 | INFO     | 
[2026-02-07 11:24:33] 2026-02-07 10:24:00,186 | INFO     | job summary report
[2026-02-07 11:24:33] 2026-02-07 10:24:00,188 | INFO     | --------------------------------------------------
[2026-02-07 11:24:33] 2026-02-07 10:24:00,188 | INFO     | PanDA job id: 6998620411
[2026-02-07 11:24:33] 2026-02-07 10:24:00,189 | INFO     | task id: 48318010
[2026-02-07 11:24:33] 2026-02-07 10:24:00,189 | INFO     | errors: (none)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 11:24:33] 2026-02-07 10:24:00,190 | INFO     | pilot state: finished 
[2026-02-07 11:24:33] 2026-02-07 10:24:00,190 | INFO     | transexitcode: 0
[2026-02-07 11:24:33] 2026-02-07 10:24:00,191 | INFO     | exeerrorcode: 0
[2026-02-07 11:24:33] 2026-02-07 10:24:00,191 | INFO     | exeerrordiag: 
[2026-02-07 11:24:33] 2026-02-07 10:24:00,192 | INFO     | exitcode: 0
[2026-02-07 11:24:33] 2026-02-07 10:24:00,195 | INFO     | exitmsg: OK
[2026-02-07 11:24:33] 2026-02-07 10:24:00,195 | INFO     | cpuconsumptiontime: 20264 s
[2026-02-07 11:24:33] 2026-02-07 10:24:00,196 | INFO     | nevents: 400
[2026-02-07 11:24:33] 2026-02-07 10:24:00,196 | INFO     | neventsw: 0
[2026-02-07 11:24:33] 2026-02-07 10:24:00,196 | INFO     | pid: 3454260
[2026-02-07 11:24:33] 2026-02-07 10:24:00,197 | INFO     | pgrp: 3454260
[2026-02-07 11:24:33] 2026-02-07 10:24:00,197 | INFO     | corecount: 4
[2026-02-07 11:24:33] 2026-02-07 10:24:00,197 | INFO     | event service: False
[2026-02-07 11:24:33] 2026-02-07 10:24:00,198 | INFO     | sizes: {0: 2282901, 1: 2283107, 11: 2283135, 5431: 2309773, 5432: 2309772, 5433: 2318854, 5434: 2319232}
[2026-02-07 11:24:33] 2026-02-07 10:24:00,198 | INFO     | --------------------------------------------------
[2026-02-07 11:24:33] 2026-02-07 10:24:00,199 | INFO     | 
[2026-02-07 11:24:33] 2026-02-07 10:24:00,200 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-02-07 11:24:33] 2026-02-07 10:24:00,246 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,247 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,247 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,247 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,249 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,256 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 11:24:33] 2026-02-07 10:24:00,257 | INFO     | job 6998620411 has completed (purged errors)
[2026-02-07 11:24:33] 2026-02-07 10:24:00,258 | INFO     | overall cleanup function is called
[2026-02-07 11:24:33] 2026-02-07 10:24:00,555 | WARNING  | process 3454260 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 11:24:33] 2026-02-07 10:24:00,837 | INFO     | PID=3443346 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-07 11:24:33] 2026-02-07 10:24:00,838 | INFO     | .. there are 3 such processes running
[2026-02-07 11:24:33] 2026-02-07 10:24:01,011 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 11:24:33] 2026-02-07 10:24:01,277 | INFO     | --- collectZombieJob: --- 10, [3454260]
[2026-02-07 11:24:33] 2026-02-07 10:24:01,277 | INFO     | zombie collector waiting for pid 3454260
[2026-02-07 11:24:33] 2026-02-07 10:24:01,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 11:24:33] 2026-02-07 10:24:01,278 | INFO     | collected zombie processes
[2026-02-07 11:24:33] 2026-02-07 10:24:01,278 | INFO     | will attempt to kill all subprocesses of pid=3454260
[2026-02-07 11:24:33] 2026-02-07 10:24:01,566 | INFO     | number of running child processes to parent process 3454260: 1
[2026-02-07 11:24:33] 2026-02-07 10:24:01,566 | INFO     | maximum number of monitored processes: 6
[2026-02-07 11:24:33] 2026-02-07 10:24:01,566 | INFO     | aborting job monitoring since job object (job id=6998620411) has expired
[2026-02-07 11:24:33] 2026-02-07 10:24:01,802 | INFO     | process IDs to be killed: [3454260] (in reverse order)
[2026-02-07 11:24:33] 2026-02-07 10:24:01,946 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 11:24:33] 2026-02-07 10:24:01,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 11:24:33] 2026-02-07 10:24:01,957 | INFO     | did not find any defunct processes belonging to 3454260
[2026-02-07 11:24:33] 2026-02-07 10:24:01,966 | INFO     | did not find any defunct processes belonging to 3454260
[2026-02-07 11:24:33] 2026-02-07 10:24:01,966 | INFO     | ready for new job
[2026-02-07 11:24:33] 2026-02-07 10:24:01,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 11:24:33] 2026-02-07 10:24:01,970 | INFO     | **************************************
[2026-02-07 11:24:33] 2026-02-07 10:24:01,971 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 11:24:33] 2026-02-07 10:24:01,971 | INFO     | **************************************
[2026-02-07 11:24:33] 2026-02-07 10:24:01,971 | INFO     | 
[2026-02-07 11:24:33] 2026-02-07 10:24:01,972 | INFO     | pilot is running in a VM
[2026-02-07 11:24:33] 2026-02-07 10:24:01,972 | INFO     | architecture information:
[2026-02-07 11:24:33] 2026-02-07 10:24:01,973 | INFO     | executing command: cat /etc/os-release
[2026-02-07 11:24:33] 2026-02-07 10:24:02,005 | INFO     | cat /etc/os-release:
[2026-02-07 11:24:33] NAME="CentOS Linux"
[2026-02-07 11:24:33] VERSION="7 (Core)"
[2026-02-07 11:24:33] ID="centos"
[2026-02-07 11:24:33] ID_LIKE="rhel fedora"
[2026-02-07 11:24:33] VERSION_ID="7"
[2026-02-07 11:24:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 11:24:33] ANSI_COLOR="0;31"
[2026-02-07 11:24:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 11:24:33] HOME_URL="https://www.centos.org/"
[2026-02-07 11:24:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 11:24:33] 
[2026-02-07 11:24:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 11:24:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 11:24:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 11:24:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 11:24:33] 
[2026-02-07 11:24:33] 2026-02-07 10:24:02,006 | INFO     | **************************************
[2026-02-07 11:24:33] 2026-02-07 10:24:02,510 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-02-07 11:24:33] 2026-02-07 10:24:02,542 | INFO     | sufficient remaining disk space (55962501120 B)
[2026-02-07 11:24:33] 2026-02-07 10:24:02,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 11:24:33] 2026-02-07 10:24:02,544 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 11:24:33] 2026-02-07 10:24:02,544 | INFO     | update_server=False
[2026-02-07 11:24:33] 2026-02-07 10:24:02,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 11:24:33] 2026-02-07 10:24:02,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 11:24:33] 2026-02-07 10:24:02,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:24:33] 2026-02-07 10:24:02,546 | INFO     | will abort loop
[2026-02-07 11:24:33] 2026-02-07 10:24:02,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 11:24:33] 2026-02-07 10:24:02,568 | INFO     | all job control threads have been joined
[2026-02-07 11:24:33] 2026-02-07 10:24:03,144 | INFO     | all data control threads have been joined
[2026-02-07 11:24:33] 2026-02-07 10:24:03,546 | INFO     | [job] retrieve thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:03,552 | INFO     | [job] job monitor thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:03,553 | INFO     | all payload control threads have been joined
[2026-02-07 11:24:33] 2026-02-07 10:24:03,574 | INFO     | [job] control thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:03,628 | INFO     | [payload] failed_post thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:03,910 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,150 | INFO     | [data] control thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,178 | INFO     | [payload] validate_post thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,206 | INFO     | [job] validate thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,395 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,553 | INFO     | [data] copytool_out thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,559 | INFO     | [payload] control thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,717 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:04,771 | INFO     | [data] copytool_in thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:05,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 11:24:33] 2026-02-07 10:24:06,205 | INFO     | [job] queue monitor thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:06,554 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:13,228 | INFO     | job.realtimelogging is not enabled
[2026-02-07 11:24:33] 2026-02-07 10:24:14,234 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 11:24:33] 2026-02-07 10:24:21,754 | INFO     | [monitor] cgroup control has ended
[2026-02-07 11:24:33] 2026-02-07 10:24:23,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126154033149760)>', '<ExcThread(monitor, started 126152584722176)>']
[2026-02-07 11:24:33] 2026-02-07 10:24:28,230 | INFO     | all workflow threads have been joined
[2026-02-07 11:24:33] 2026-02-07 10:24:28,231 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 11:24:33] 2026-02-07 10:24:28,231 | INFO     | traces error code: 0
[2026-02-07 11:24:33] 2026-02-07 10:24:28,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 11:24:33] 2026-02-07 10:24:33,254 | INFO     | PID=3443346 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 11:24:33] 2026-02-07 10:24:33,254 | INFO     | .. there are 3 such processes running
[2026-02-07 11:24:33] 2026-02-07 10:24:33,255 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 11:24:33] 2026-02-07 10:24:33,255 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 11:24:33] 2026-02-07 10:24:33,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 11:24:33] 2026-02-07 10:24:33,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 11:24:33] 2026-02-07 10:24:33,255 | INFO     | [monitor] control thread has ended
[2026-02-07 11:24:33] 2026-02-07 10:24:33,445 [wrapper] ==== pilot stdout END ====
[2026-02-07 11:24:33] 2026-02-07 10:24:33,455 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 11:24:33] 2026-02-07 10:24:33,464 [wrapper] pilotpid: 3443346
[2026-02-07 11:24:33] 2026-02-07 10:24:33,473 [wrapper] Pilot exit status: 0
[2026-02-07 11:24:33] 2026-02-07 10:24:33,506 [wrapper] pandaids: 6998620411
[2026-02-07 11:24:33] 2026-02-07 10:24:33,607 [wrapper] cleanup supervisor_pilot 3483458 3443347
[2026-02-07 11:24:33] 2026-02-07 10:24:33,616 [wrapper] Test setup, not cleaning
[2026-02-07 11:24:33] 2026-02-07 10:24:33,625 [wrapper] apfmon messages muted
[2026-02-07 11:24:33] 2026-02-07 10:24:33,635 [wrapper] ==== wrapper stdout END ====
[2026-02-07 11:24:33] 2026-02-07 10:24:33,644 [wrapper] ==== wrapper stderr END ====
[2026-02-07 11:24:33]  *** Error codes and diagnostics ***
[2026-02-07 11:24:33]     "exeErrorCode": 0,
[2026-02-07 11:24:33]     "exeErrorDiag": "",
[2026-02-07 11:24:33]     "pilotErrorCode": 0,
[2026-02-07 11:24:33]     "pilotErrorDiag": "",
[2026-02-07 11:24:33]  *** Listing of results directory ***
[2026-02-07 11:24:33] insgesamt 667516
[2026-02-07 11:24:33] -rwx------ 1 yeti boinc     36322 Feb  7 02:46 runpilot2-wrapper.sh
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc    584627 Feb  7 02:47 pilot3.tar.gz
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc      5111 Feb  7 02:50 queuedata.json
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc       100 Feb  7 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 11:24:33] -rwxr-xr-x 1 yeti boinc      7986 Feb  7 09:52 run_atlas
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc       105 Feb  7 09:52 job.xml
[2026-02-07 11:24:33] -rw-r--r-- 2 yeti boinc 496491379 Feb  7 09:52 EVNT.48318008._000200.pool.root.1
[2026-02-07 11:24:33] -rw-r--r-- 2 yeti boinc    597952 Feb  7 09:52 input.tar.gz
[2026-02-07 11:24:33] -rw-r--r-- 2 yeti boinc     15845 Feb  7 09:52 start_atlas.sh
[2026-02-07 11:24:33] drwxrwx--x 2 yeti boinc      4096 Feb  7 09:52 shared
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc      6559 Feb  7 09:52 init_data.xml
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc         0 Feb  7 09:52 boinc_setup_complete
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc         0 Feb  7 09:52 boinc_lockfile
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc      2527 Feb  7 09:52 pandaJob.out
[2026-02-07 11:24:33] -rw------- 1 yeti boinc        52 Feb  7 09:52 setup.sh.local
[2026-02-07 11:24:33] -rw------- 1 yeti boinc   1009496 Feb  7 09:53 agis_schedconf.cvmfs.json
[2026-02-07 11:24:33] -rw------- 1 yeti boinc   1513088 Feb  7 09:53 agis_ddmendpoints.agis.ALL.json
[2026-02-07 11:24:33] -rw------- 1 yeti boinc       422 Feb  7 09:53 workernode_map.json
[2026-02-07 11:24:33] drwx------ 5 yeti boinc      4096 Feb  7 09:53 pilot3
[2026-02-07 11:24:33] -rw------- 1 yeti boinc 180885251 Feb  7 11:23 HITS.48318010._011042.pool.root.1
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc       530 Feb  7 11:23 boinc_task_state.xml
[2026-02-07 11:24:33] -rw------- 1 yeti boinc        95 Feb  7 11:23 pilot_heartbeat.json
[2026-02-07 11:24:33] -rw------- 1 yeti boinc      1019 Feb  7 11:23 memory_monitor_summary.json
[2026-02-07 11:24:33] -rw------- 1 yeti boinc    309618 Feb  7 11:23 log.48318010._011042.job.log.tgz.1
[2026-02-07 11:24:33] -rw------- 1 yeti boinc      6284 Feb  7 11:24 heartbeat.json
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc      8192 Feb  7 11:24 boinc_mmap_file
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc        27 Feb  7 11:24 wrapper_checkpoint.txt
[2026-02-07 11:24:33] -rw------- 1 yeti boinc       822 Feb  7 11:24 pilotlog.txt
[2026-02-07 11:24:33] -rw------- 1 yeti boinc    801755 Feb  7 11:24 log.48318010._011042.job.log.1
[2026-02-07 11:24:33] -rw------- 1 yeti boinc       357 Feb  7 11:24 output.list
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc       620 Feb  7 11:24 runtime_log
[2026-02-07 11:24:33] -rw------- 1 yeti boinc   1126400 Feb  7 11:24 result.tar.gz
[2026-02-07 11:24:33] -rw------- 1 yeti boinc       639 Feb  7 11:24 Ti5MDmDam88n9Rq4apOajLDm4fhM0noT9bVooX4SDmPyZKDmONFeqm.diag
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc      9546 Feb  7 11:24 runtime_log.err
[2026-02-07 11:24:33] -rw-r--r-- 1 yeti boinc     21386 Feb  7 11:24 stderr.txt
[2026-02-07 11:24:33] HITS file was successfully produced:
[2026-02-07 11:24:33] -rw------- 1 yeti boinc 180885251 Feb  7 11:23 shared/HITS.pool.root.1
[2026-02-07 11:24:33]  *** Contents of shared directory: ***
[2026-02-07 11:24:33] insgesamt 663212
[2026-02-07 11:24:33] -rw-r--r-- 2 yeti boinc 496491379 Feb  7 09:52 ATLAS.root_0
[2026-02-07 11:24:33] -rw-r--r-- 2 yeti boinc    597952 Feb  7 09:52 input.tar.gz
[2026-02-07 11:24:33] -rw-r--r-- 2 yeti boinc     15845 Feb  7 09:52 start_atlas.sh
[2026-02-07 11:24:33] -rw------- 1 yeti boinc 180885251 Feb  7 11:23 HITS.pool.root.1
[2026-02-07 11:24:33] -rw------- 1 yeti boinc   1126400 Feb  7 11:24 result.tar.gz
11:24:35 (3436374): run_atlas exited; CPU time 20503.878233
11:24:35 (3436374): called boinc_finish(0)

</stderr_txt>
]]>

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