Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:29 (8205): wrapper (7.7.26015): starting
06:27:29 (8205): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 06:27:29] Arguments: --nthreads 12
[2026-02-07 06:27:29] Threads: 12
[2026-02-07 06:27:29] Checking for CVMFS
[2026-02-07 06:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 06:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 06:27:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 06:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 06:27:29] 2.11.2.0 28623 385365 97308 155982 0 51 18736064 20275200 1 130560 4 167196222 99.948 22542889 16840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 06:27:29] CVMFS is ok
[2026-02-07 06:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 06:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 06:27:29] Further information can be found at the LHC@home message board.
[2026-02-07 06:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 06:27:29] Checking for apptainer binary...
[2026-02-07 06:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 06:27:29] Running /usr/bin/apptainer --version
[2026-02-07 06:27:29] apptainer version 1.3.2-1.el7
[2026-02-07 06:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 06:27:31] c-205-20.aglt2.org
[2026-02-07 06:27:31] apptainer works
[2026-02-07 06:27:31] Set ATHENA_PROC_NUMBER=12
[2026-02-07 06:27:31] Set ATHENA_CORE_NUMBER=12
[2026-02-07 06:27:31] Starting ATLAS job with PandaID=7005738233
[2026-02-07 06:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 07:45:07]  *** The last 200 lines of the pilot log: ***
[2026-02-07 07:45:07]  guid=75085250-3005-4ed9-9dfe-c96fbc5c9c86
[2026-02-07 07:45:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 07:45:07]  is_altstaged=None
[2026-02-07 07:45:07]  is_tar=False
[2026-02-07 07:45:07]  lfn=log.48317892._015402.job.log.tgz.1
[2026-02-07 07:45:07]  mtime=0
[2026-02-07 07:45:07]  protocol_id=None
[2026-02-07 07:45:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 07:45:07]  replicas=None
[2026-02-07 07:45:07]  scope=mc23_13p6TeV
[2026-02-07 07:45:07]  status=None
[2026-02-07 07:45:07]  status_code=0
[2026-02-07 07:45:07]  storage_token=
[2026-02-07 07:45:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7005738233/log.48317892._015402.job.log.tgz.1
[2026-02-07 07:45:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/ad/log.48317892._015402.job.log.tgz.1
[2026-02-07 07:45:07]  workdir=None
[2026-02-07 07:45:07] ]
[2026-02-07 07:45:07] 2026-02-07 12:44:33,170 | INFO     | transferring file log.48317892._015402.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7005738233/log.48317892._015402.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 07:45:07] 2026-02-07 12:44:33,170 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7005738233/log.48317892._015402.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317892._015402.job
[2026-02-07 07:45:07] 2026-02-07 12:44:33,191 | INFO     | adding to output.list: log.48317892._015402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/ad/log.48317892._015402.job.log.tg
[2026-02-07 07:45:07] 2026-02-07 12:44:33,192 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 07:45:07] 2026-02-07 12:44:33,193 | INFO     | summary of transferred files:
[2026-02-07 07:45:07] 2026-02-07 12:44:33,193 | INFO     |  -- lfn=log.48317892._015402.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 07:45:07] 2026-02-07 12:44:33,193 | INFO     | stage-out finished correctly
[2026-02-07 07:45:07] 2026-02-07 12:44:33,867 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 07:45:07] 2026-02-07 12:44:34,154 | INFO     | time since job start (4603s) is within the limit (349056.0s)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,707 | INFO     | job 7005738233 has state=finished
[2026-02-07 07:45:07] 2026-02-07 12:44:34,708 | INFO     | preparing for final server update for job 7005738233 in state='finished'
[2026-02-07 07:45:07] 2026-02-07 12:44:34,708 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7005738233/jobReport.json
[2026-02-07 07:45:07] 2026-02-07 12:44:34,710 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-07 07:45:07] 2026-02-07 12:44:34,710 | INFO     | this job has now completed (state=finished)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,710 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,711 | INFO     | log transfer has been attempted: DONE
[2026-02-07 07:45:07] 2026-02-07 12:44:34,711 | INFO     | job 7005738233 has finished - writing final server update
[2026-02-07 07:45:07] 2026-02-07 12:44:34,711 | INFO     | total number of processed events: 400 (read)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,713 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7005738233/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,713 | INFO     | extracted standard info from prmon json
[2026-02-07 07:45:07] 2026-02-07 12:44:34,713 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 07:45:07] 2026-02-07 12:44:34,713 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 07:45:07] 2026-02-07 12:44:34,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 07:45:07] 2026-02-07 12:44:34,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 07:45:07] 2026-02-07 12:44:34,715 | INFO     | fitting pss+swap vs Time
[2026-02-07 07:45:07] 2026-02-07 12:44:34,715 | INFO     | sum of square deviations: 97479037.0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,716 | INFO     | sum of deviations: -7953952443.0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,716 | INFO     | mean x: 1770466043.5
[2026-02-07 07:45:07] 2026-02-07 12:44:34,716 | INFO     | mean y: 2799767.088235294
[2026-02-07 07:45:07] 2026-02-07 12:44:34,716 | INFO     | intersect: 144466708575.9675
[2026-02-07 07:45:07] 2026-02-07 12:44:34,716 | INFO     | chi2: 0.08821165019905627
[2026-02-07 07:45:07] 2026-02-07 12:44:34,716 | INFO     | current memory leak: -81.60 B/s (using 68 data points, chi2=0.09)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | could have reported an average CPU frequency of 1684 MHz (6 samples)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | ..............................
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | . Timing measurements:
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | . get job = 0 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | . initial setup = 7 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | . payload setup = 7 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,717 | INFO     | . stage-in = 0 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,718 | INFO     | . payload execution = 4577 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,718 | INFO     | . stage-out = 0 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,718 | INFO     | . log creation = 0 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,718 | INFO     | ..............................
[2026-02-07 07:45:07] 2026-02-07 12:44:34,797 | INFO     | 
[2026-02-07 07:45:07] 2026-02-07 12:44:34,797 | INFO     | job summary report
[2026-02-07 07:45:07] 2026-02-07 12:44:34,797 | INFO     | --------------------------------------------------
[2026-02-07 07:45:07] 2026-02-07 12:44:34,797 | INFO     | PanDA job id: 7005738233
[2026-02-07 07:45:07] 2026-02-07 12:44:34,797 | INFO     | task id: 48317892
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | errors: (none)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | pilot state: finished 
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | transexitcode: 0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | exeerrorcode: 0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | exeerrordiag: 
[2026-02-07 07:45:07] 2026-02-07 12:44:34,798 | INFO     | exitcode: 0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | exitmsg: OK
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | cpuconsumptiontime: 49854 s
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | nevents: 400
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | neventsw: 0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | pid: 16315
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | pgrp: 16315
[2026-02-07 07:45:07] 2026-02-07 12:44:34,799 | INFO     | corecount: 12
[2026-02-07 07:45:07] 2026-02-07 12:44:34,800 | INFO     | event service: False
[2026-02-07 07:45:07] 2026-02-07 12:44:34,800 | INFO     | sizes: {0: 2282785, 1: 2282991, 11: 2283019, 4588: 2309179, 4590: 2318177, 4591: 2318233, 4592: 2318555}
[2026-02-07 07:45:07] 2026-02-07 12:44:34,800 | INFO     | --------------------------------------------------
[2026-02-07 07:45:07] 2026-02-07 12:44:34,800 | INFO     | 
[2026-02-07 07:45:07] 2026-02-07 12:44:34,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 07:45:07] 2026-02-07 12:44:34,826 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,826 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,827 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,827 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,829 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,829 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 07:45:07] 2026-02-07 12:44:34,830 | INFO     | job 7005738233 has completed (purged errors)
[2026-02-07 07:45:07] 2026-02-07 12:44:34,830 | INFO     | overall cleanup function is called
[2026-02-07 07:45:07] 2026-02-07 12:44:35,539 | WARNING  | process 16315 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 07:45:07] 2026-02-07 12:44:35,609 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 07:45:07] 2026-02-07 12:44:35,692 | INFO     | number of running child processes to parent process 16315: 1
[2026-02-07 07:45:07] 2026-02-07 12:44:35,692 | INFO     | maximum number of monitored processes: 6
[2026-02-07 07:45:07] 2026-02-07 12:44:35,693 | INFO     | aborting job monitoring since job object (job id=7005738233) has expired
[2026-02-07 07:45:07] 2026-02-07 12:44:35,838 | INFO     | --- collectZombieJob: --- 10, [16315]
[2026-02-07 07:45:07] 2026-02-07 12:44:35,838 | INFO     | zombie collector waiting for pid 16315
[2026-02-07 07:45:07] 2026-02-07 12:44:35,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 07:45:07] 2026-02-07 12:44:35,838 | INFO     | collected zombie processes
[2026-02-07 07:45:07] 2026-02-07 12:44:35,839 | INFO     | will attempt to kill all subprocesses of pid=16315
[2026-02-07 07:45:07] 2026-02-07 12:44:35,925 | INFO     | process IDs to be killed: [16315] (in reverse order)
[2026-02-07 07:45:07] 2026-02-07 12:44:35,975 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 07:45:07] 2026-02-07 12:44:35,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 07:45:07] 2026-02-07 12:44:35,979 | INFO     | did not find any defunct processes belonging to 16315
[2026-02-07 07:45:07] 2026-02-07 12:44:35,981 | INFO     | did not find any defunct processes belonging to 16315
[2026-02-07 07:45:07] 2026-02-07 12:44:35,981 | INFO     | ready for new job
[2026-02-07 07:45:07] 2026-02-07 12:44:35,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 07:45:07] 2026-02-07 12:44:35,982 | INFO     | **************************************
[2026-02-07 07:45:07] 2026-02-07 12:44:35,982 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 07:45:07] 2026-02-07 12:44:35,982 | INFO     | **************************************
[2026-02-07 07:45:07] 2026-02-07 12:44:35,983 | INFO     | 
[2026-02-07 07:45:07] 2026-02-07 12:44:35,983 | INFO     | architecture information:
[2026-02-07 07:45:07] 2026-02-07 12:44:35,984 | INFO     | executing command: cat /etc/os-release
[2026-02-07 07:45:07] 2026-02-07 12:44:36,000 | INFO     | cat /etc/os-release:
[2026-02-07 07:45:07] NAME="CentOS Linux"
[2026-02-07 07:45:07] VERSION="7 (Core)"
[2026-02-07 07:45:07] ID="centos"
[2026-02-07 07:45:07] ID_LIKE="rhel fedora"
[2026-02-07 07:45:07] VERSION_ID="7"
[2026-02-07 07:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 07:45:07] ANSI_COLOR="0;31"
[2026-02-07 07:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 07:45:07] HOME_URL="https://www.centos.org/"
[2026-02-07 07:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 07:45:07] 
[2026-02-07 07:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 07:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 07:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 07:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 07:45:07] 
[2026-02-07 07:45:07] 2026-02-07 12:44:36,001 | INFO     | **************************************
[2026-02-07 07:45:07] 2026-02-07 12:44:36,503 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 07:45:07] 2026-02-07 12:44:36,520 | INFO     | sufficient remaining disk space (28798091264 B)
[2026-02-07 07:45:07] 2026-02-07 12:44:36,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 07:45:07] 2026-02-07 12:44:36,520 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 07:45:07] 2026-02-07 12:44:36,521 | INFO     | update_server=False
[2026-02-07 07:45:07] 2026-02-07 12:44:36,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 07:45:07] 2026-02-07 12:44:36,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 07:45:07] 2026-02-07 12:44:36,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:45:07] 2026-02-07 12:44:36,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 07:45:07] 2026-02-07 12:44:36,522 | INFO     | will abort loop
[2026-02-07 07:45:07] 2026-02-07 12:44:36,940 | INFO     | all data control threads have been joined
[2026-02-07 07:45:07] 2026-02-07 12:44:37,192 | INFO     | all payload control threads have been joined
[2026-02-07 07:45:07] 2026-02-07 12:44:37,526 | INFO     | [job] retrieve thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:37,527 | INFO     | [job] queue monitor thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:37,528 | INFO     | [job] job monitor thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:37,650 | INFO     | all job control threads have been joined
[2026-02-07 07:45:07] 2026-02-07 12:44:37,811 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:37,945 | INFO     | [data] control thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,028 | INFO     | [data] copytool_in thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,193 | INFO     | [payload] control thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,310 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,527 | INFO     | [data] copytool_out thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,656 | INFO     | [job] control thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,750 | INFO     | [payload] validate_post thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,815 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,815 | INFO     | [job] validate thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:38,844 | INFO     | [payload] failed_post thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:39,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 07:45:07] 2026-02-07 12:44:43,955 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:47,375 | INFO     | job.realtimelogging is not enabled
[2026-02-07 07:45:07] 2026-02-07 12:44:48,380 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 07:45:07] 2026-02-07 12:44:58,575 | INFO     | [monitor] cgroup control has ended
[2026-02-07 07:45:07] 2026-02-07 12:44:59,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736658835264)>', '<ExcThread(monitor, started 139735402010368)>']
[2026-02-07 07:45:07] 2026-02-07 12:45:04,320 | INFO     | all workflow threads have been joined
[2026-02-07 07:45:07] 2026-02-07 12:45:04,320 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 07:45:07] 2026-02-07 12:45:04,323 | INFO     | traces error code: 0
[2026-02-07 07:45:07] 2026-02-07 12:45:04,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 07:45:07] 2026-02-07 12:45:07,349 | INFO     | PID=11899 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 07:45:07] 2026-02-07 12:45:07,350 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 07:45:07] 2026-02-07 12:45:07,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 07:45:07] 2026-02-07 12:45:07,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 07:45:07] 2026-02-07 12:45:07,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 07:45:07] 2026-02-07 12:45:07,350 | INFO     | [monitor] control thread has ended
[2026-02-07 07:45:07] 2026-02-07 12:45:07,442 [wrapper] ==== pilot stdout END ====
[2026-02-07 07:45:07] 2026-02-07 12:45:07,446 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 07:45:07] 2026-02-07 12:45:07,450 [wrapper] pilotpid: 11899
[2026-02-07 07:45:07] 2026-02-07 12:45:07,454 [wrapper] Pilot exit status: 0
[2026-02-07 07:45:07] 2026-02-07 12:45:07,469 [wrapper] pandaids: 7005738233
[2026-02-07 07:45:07] 2026-02-07 12:45:07,508 [wrapper] cleanup supervisor_pilot  6221 11900
[2026-02-07 07:45:07] 2026-02-07 12:45:07,512 [wrapper] Test setup, not cleaning
[2026-02-07 07:45:07] 2026-02-07 12:45:07,516 [wrapper] apfmon messages muted
[2026-02-07 07:45:07] 2026-02-07 12:45:07,520 [wrapper] ==== wrapper stdout END ====
[2026-02-07 07:45:07] 2026-02-07 12:45:07,524 [wrapper] ==== wrapper stderr END ====
[2026-02-07 07:45:07]  *** Error codes and diagnostics ***
[2026-02-07 07:45:07]     "exeErrorCode": 0,
[2026-02-07 07:45:07]     "exeErrorDiag": "",
[2026-02-07 07:45:07]     "pilotErrorCode": 0,
[2026-02-07 07:45:07]     "pilotErrorDiag": "",
[2026-02-07 07:45:07]  *** Listing of results directory ***
[2026-02-07 07:45:07] total 671632
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas    584627 Feb  7 00:41 pilot3.tar.gz
[2026-02-07 07:45:07] -rwx------ 1 boincer umatlas     36322 Feb  7 00:43 runpilot2-wrapper.sh
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas      5111 Feb  7 00:45 queuedata.json
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas       100 Feb  7 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 07:45:07] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 06:27 run_atlas
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas       105 Feb  7 06:27 job.xml
[2026-02-07 07:45:07] -rw-r--r-- 2 boincer umatlas 496539438 Feb  7 06:27 EVNT.48317889._000287.pool.root.1
[2026-02-07 07:45:07] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 06:27 start_atlas.sh
[2026-02-07 07:45:07] drwxrwx--x 2 boincer umatlas      4096 Feb  7 06:27 shared
[2026-02-07 07:45:07] -rw-r--r-- 2 boincer umatlas    597952 Feb  7 06:27 input.tar.gz
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas         0 Feb  7 06:27 boinc_lockfile
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas      2523 Feb  7 06:27 pandaJob.out
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas        57 Feb  7 06:27 setup.sh.local
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas   1009494 Feb  7 06:27 agis_schedconf.cvmfs.json
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas   1513088 Feb  7 06:27 agis_ddmendpoints.agis.ALL.json
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas       434 Feb  7 06:27 workernode_map.json
[2026-02-07 07:45:07] drwx------ 5 boincer umatlas      4096 Feb  7 06:27 pilot3
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas      5953 Feb  7 07:40 init_data.xml
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas 185113060 Feb  7 07:44 HITS.48317892._015402.pool.root.1
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas       530 Feb  7 07:44 boinc_task_state.xml
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas      1044 Feb  7 07:44 memory_monitor_summary.json
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas    411907 Feb  7 07:44 log.48317892._015402.job.log.tgz.1
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas      6411 Feb  7 07:44 heartbeat.json
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 07:44 boinc_mmap_file
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas        27 Feb  7 07:44 wrapper_checkpoint.txt
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas        95 Feb  7 07:45 pilot_heartbeat.json
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas       745 Feb  7 07:45 pilotlog.txt
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas    670005 Feb  7 07:45 log.48317892._015402.job.log.1
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas       357 Feb  7 07:45 output.list
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas       620 Feb  7 07:45 runtime_log
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas   1095680 Feb  7 07:45 result.tar.gz
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas      9343 Feb  7 07:45 runtime_log.err
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas       659 Feb  7 07:45 lOZLDmiHq88n9Rq4apOajLDm4fhM0noT9bVooX4SDmzSaKDmtgj2Xo.diag
[2026-02-07 07:45:07] -rw-r--r-- 1 boincer umatlas     21366 Feb  7 07:45 stderr.txt
[2026-02-07 07:45:07] HITS file was successfully produced:
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas 185113060 Feb  7 07:44 shared/HITS.pool.root.1
[2026-02-07 07:45:07]  *** Contents of shared directory: ***
[2026-02-07 07:45:07] total 667356
[2026-02-07 07:45:07] -rw-r--r-- 2 boincer umatlas 496539438 Feb  7 06:27 ATLAS.root_0
[2026-02-07 07:45:07] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 06:27 start_atlas.sh
[2026-02-07 07:45:07] -rw-r--r-- 2 boincer umatlas    597952 Feb  7 06:27 input.tar.gz
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas 185113060 Feb  7 07:44 HITS.pool.root.1
[2026-02-07 07:45:07] -rw------- 1 boincer umatlas   1095680 Feb  7 07:45 result.tar.gz
07:45:09 (8205): run_atlas exited; CPU time 49830.272846
07:45:09 (8205): called boinc_finish(0)

</stderr_txt>
]]>

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