Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:04 (1968962): wrapper (7.7.26015): starting
00:03:04 (1968962): wrapper: running run_atlas (--nthreads 12)
[2026-02-07 00:03:04] Arguments: --nthreads 12
[2026-02-07 00:03:04] Threads: 12
[2026-02-07 00:03:04] Checking for CVMFS
[2026-02-07 00:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 00:03:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 00:03:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 00:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 00:03:06] 2.13.3.0 9582 134703 229696 155971 0 1132 34354716 40960001 35299 16776704 0 1550234700 99.736 1102367363 48880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-07 00:03:06] CVMFS is ok
[2026-02-07 00:03:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 00:03:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 00:03:06] Further information can be found at the LHC@home message board.
[2026-02-07 00:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 00:03:06] Checking for apptainer binary...
[2026-02-07 00:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 00:03:06] Running /usr/bin/apptainer --version
[2026-02-07 00:03:07] apptainer version 1.4.5-2.el9
[2026-02-07 00:03:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 00:03:10] c8-7-4.aglt2.org
[2026-02-07 00:03:10] apptainer works
[2026-02-07 00:03:11] Set ATHENA_PROC_NUMBER=12
[2026-02-07 00:03:11] Set ATHENA_CORE_NUMBER=12
[2026-02-07 00:03:11] Starting ATLAS job with PandaID=6998616039
[2026-02-07 00:03:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 01:13:32]  *** The last 200 lines of the pilot log: ***
[2026-02-07 01:13:33]  filetype=log
[2026-02-07 01:13:33]  guid=29d7c6e0-1553-420b-b9d1-7fbdec1d05fb
[2026-02-07 01:13:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 01:13:33]  is_altstaged=None
[2026-02-07 01:13:33]  is_tar=False
[2026-02-07 01:13:33]  lfn=log.48310749._006395.job.log.tgz.1
[2026-02-07 01:13:33]  mtime=0
[2026-02-07 01:13:33]  protocol_id=None
[2026-02-07 01:13:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 01:13:33]  replicas=None
[2026-02-07 01:13:33]  scope=mc23_13p6TeV
[2026-02-07 01:13:33]  status=None
[2026-02-07 01:13:33]  status_code=0
[2026-02-07 01:13:33]  storage_token=
[2026-02-07 01:13:33]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6998616039/log.48310749._006395.job.log.tgz.1
[2026-02-07 01:13:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/ac/log.48310749._006395.job.log.tgz.1
[2026-02-07 01:13:33]  workdir=None
[2026-02-07 01:13:33] ]
[2026-02-07 01:13:33] 2026-02-07 06:12:48,906 | INFO     | monitor loop #263: job 0:6998616039 is in state 'stageout'
[2026-02-07 01:13:33] 2026-02-07 06:12:48,907 | WARNING  | aborting job monitor tasks since payload process 2015333 is not running
[2026-02-07 01:13:33] 2026-02-07 06:12:49,045 | INFO     | transferring file log.48310749._006395.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6998616039/log.48310749._006395.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 01:13:33] 2026-02-07 06:12:49,045 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6998616039/log.48310749._006395.job.log.tgz.1 /tmp/boinchome/slots/5/log.48310749._006395.job
[2026-02-07 01:13:33] 2026-02-07 06:12:49,140 | INFO     | adding to output.list: log.48310749._006395.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/ac/log.48310749._006395.job.log.tg
[2026-02-07 01:13:33] 2026-02-07 06:12:49,140 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 01:13:33] 2026-02-07 06:12:49,140 | INFO     | summary of transferred files:
[2026-02-07 01:13:33] 2026-02-07 06:12:49,140 | INFO     |  -- lfn=log.48310749._006395.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 01:13:33] 2026-02-07 06:12:49,141 | INFO     | stage-out finished correctly
[2026-02-07 01:13:33] 2026-02-07 06:12:49,252 | INFO     | time since job start (4051s) is within the limit (349056.0s)
[2026-02-07 01:13:33] 2026-02-07 06:12:49,363 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 01:13:33] 2026-02-07 06:12:50,627 | INFO     | job 6998616039 has state=finished
[2026-02-07 01:13:33] 2026-02-07 06:12:50,628 | INFO     | preparing for final server update for job 6998616039 in state='finished'
[2026-02-07 01:13:33] 2026-02-07 06:12:50,781 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,781 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6998616039/jobReport.json
[2026-02-07 01:13:33] 2026-02-07 06:12:50,782 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-02-07 01:13:33] 2026-02-07 06:12:50,782 | INFO     | this job has now completed (state=finished)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,782 | INFO     | log transfer has been attempted: DONE
[2026-02-07 01:13:33] 2026-02-07 06:12:50,782 | INFO     | job 6998616039 has finished - writing final server update
[2026-02-07 01:13:33] 2026-02-07 06:12:50,783 | INFO     | total number of processed events: 400 (read)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,843 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6998616039/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,860 | INFO     | extracted standard info from prmon json
[2026-02-07 01:13:33] 2026-02-07 06:12:50,860 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 01:13:33] 2026-02-07 06:12:50,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 01:13:33] 2026-02-07 06:12:50,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 01:13:33] 2026-02-07 06:12:50,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | fitting pss+swap vs Time
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | sum of square deviations: 60485264.4137931
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | sum of deviations: 6469025376.448273
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | mean x: 1770442855.689655
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | mean y: 2593400.9137931033
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | intersect: -189349968285.10516
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | chi2: 0.534328225344572
[2026-02-07 01:13:33] 2026-02-07 06:12:50,861 | INFO     | current memory leak: 106.95 B/s (using 58 data points, chi2=0.53)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | ..............................
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . Timing measurements:
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . get job = 0 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . initial setup = 45 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . payload setup = 46 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . stage-in = 0 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . payload execution = 3984 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . stage-out = 1 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | . log creation = 0 s
[2026-02-07 01:13:33] 2026-02-07 06:12:50,862 | INFO     | ..............................
[2026-02-07 01:13:33] 2026-02-07 06:12:51,002 | INFO     | 
[2026-02-07 01:13:33] 2026-02-07 06:12:51,002 | INFO     | job summary report
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | --------------------------------------------------
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | PanDA job id: 6998616039
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | task id: 48310749
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | errors: (none)
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | pilot state: finished 
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | transexitcode: 0
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | exeerrorcode: 0
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | exeerrordiag: 
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | exitcode: 0
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | exitmsg: OK
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | cpuconsumptiontime: 20882 s
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | nevents: 400
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | neventsw: 0
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | pid: 2015333
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | pgrp: 2015333
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | corecount: 12
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | event service: False
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | sizes: {0: 2282550, 1: 2282691, 2: 2283095, 13: 2283095, 4035: 2308988, 4036: 2308987, 4037: 2318169, 4038: 2318225, 4039: 2318419}
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | --------------------------------------------------
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | 
[2026-02-07 01:13:33] 2026-02-07 06:12:51,003 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | job 6998616039 has completed (purged errors)
[2026-02-07 01:13:33] 2026-02-07 06:12:51,140 | INFO     | overall cleanup function is called
[2026-02-07 01:13:33] 2026-02-07 06:12:52,156 | INFO     | --- collectZombieJob: --- 10, [2015333]
[2026-02-07 01:13:33] 2026-02-07 06:12:52,157 | INFO     | zombie collector waiting for pid 2015333
[2026-02-07 01:13:33] 2026-02-07 06:12:52,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 01:13:33] 2026-02-07 06:12:52,157 | INFO     | collected zombie processes
[2026-02-07 01:13:33] 2026-02-07 06:12:52,157 | INFO     | will attempt to kill all subprocesses of pid=2015333
[2026-02-07 01:13:33] 2026-02-07 06:12:53,461 | INFO     | process IDs to be killed: [2015333] (in reverse order)
[2026-02-07 01:13:33] 2026-02-07 06:12:53,820 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 01:13:33] 2026-02-07 06:12:53,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 01:13:33] 2026-02-07 06:12:53,849 | INFO     | did not find any defunct processes belonging to 2015333
[2026-02-07 01:13:33] 2026-02-07 06:12:53,900 | INFO     | did not find any defunct processes belonging to 2015333
[2026-02-07 01:13:33] 2026-02-07 06:12:53,901 | INFO     | ready for new job
[2026-02-07 01:13:33] 2026-02-07 06:12:53,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 01:13:33] 2026-02-07 06:12:53,902 | INFO     | **************************************
[2026-02-07 01:13:33] 2026-02-07 06:12:53,902 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 01:13:33] 2026-02-07 06:12:53,902 | INFO     | **************************************
[2026-02-07 01:13:33] 2026-02-07 06:12:53,902 | INFO     | 
[2026-02-07 01:13:33] 2026-02-07 06:12:53,906 | INFO     | architecture information:
[2026-02-07 01:13:33] 2026-02-07 06:12:53,906 | INFO     | executing command: cat /etc/os-release
[2026-02-07 01:13:33] 2026-02-07 06:12:53,986 | INFO     | cat /etc/os-release:
[2026-02-07 01:13:33] NAME="CentOS Linux"
[2026-02-07 01:13:33] VERSION="7 (Core)"
[2026-02-07 01:13:33] ID="centos"
[2026-02-07 01:13:33] ID_LIKE="rhel fedora"
[2026-02-07 01:13:33] VERSION_ID="7"
[2026-02-07 01:13:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 01:13:33] ANSI_COLOR="0;31"
[2026-02-07 01:13:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 01:13:33] HOME_URL="https://www.centos.org/"
[2026-02-07 01:13:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 01:13:33] 
[2026-02-07 01:13:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 01:13:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 01:13:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 01:13:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 01:13:33] 
[2026-02-07 01:13:33] 2026-02-07 06:12:53,986 | INFO     | **************************************
[2026-02-07 01:13:33] 2026-02-07 06:12:54,503 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-07 01:13:33] 2026-02-07 06:12:54,616 | INFO     | sufficient remaining disk space (161021427712 B)
[2026-02-07 01:13:33] 2026-02-07 06:12:54,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 01:13:33] 2026-02-07 06:12:54,616 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 01:13:33] 2026-02-07 06:12:54,616 | INFO     | update_server=False
[2026-02-07 01:13:33] 2026-02-07 06:12:54,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 01:13:33] 2026-02-07 06:12:54,811 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 01:13:33] 2026-02-07 06:12:54,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 01:13:33] 2026-02-07 06:12:54,954 | INFO     | aborting loop
[2026-02-07 01:13:33] 2026-02-07 06:12:55,089 | INFO     | all job control threads have been joined
[2026-02-07 01:13:33] 2026-02-07 06:12:55,274 | INFO     | all data control threads have been joined
[2026-02-07 01:13:33] 2026-02-07 06:12:55,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 01:13:33] 2026-02-07 06:12:55,605 | INFO     | all payload control threads have been joined
[2026-02-07 01:13:33] 2026-02-07 06:12:55,625 | INFO     | [job] retrieve thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:55,965 | INFO     | [job] job monitor thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 01:13:33] 2026-02-07 06:12:56,083 | INFO     | [job] validate thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,095 | INFO     | [job] control thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,279 | INFO     | [data] control thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,611 | INFO     | [payload] control thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,740 | INFO     | [payload] validate_post thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,820 | INFO     | [data] copytool_out thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,927 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,928 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:56,950 | INFO     | [payload] failed_post thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:57,026 | INFO     | [job] queue monitor thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:57,042 | INFO     | [data] copytool_in thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:57,043 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:12:59,561 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:13:05,549 | INFO     | job.realtimelogging is not enabled
[2026-02-07 01:13:33] 2026-02-07 06:13:06,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 01:13:33] 2026-02-07 06:13:23,464 | INFO     | PID=1989045 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 01:13:33] 2026-02-07 06:13:23,465 | INFO     | .. there are 40 such processes running
[2026-02-07 01:13:33] 2026-02-07 06:13:23,467 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 01:13:33] 2026-02-07 06:13:23,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 01:13:33] 2026-02-07 06:13:23,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 01:13:33] 2026-02-07 06:13:25,271 | INFO     | [monitor] cgroup control has ended
[2026-02-07 01:13:33] 2026-02-07 06:13:26,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192222762816)>', '<ExcThread(monitor, started 140191289308928)>']
[2026-02-07 01:13:33] 2026-02-07 06:13:27,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 01:13:33] 2026-02-07 06:13:27,496 | INFO     | [monitor] control thread has ended
[2026-02-07 01:13:33] 2026-02-07 06:13:31,602 | INFO     | all workflow threads have been joined
[2026-02-07 01:13:33] 2026-02-07 06:13:31,605 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 01:13:33] 2026-02-07 06:13:31,605 | INFO     | traces error code: 0
[2026-02-07 01:13:33] 2026-02-07 06:13:31,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 01:13:33] 2026-02-07 06:13:31,813 [wrapper] ==== pilot stdout END ====
[2026-02-07 01:13:33] 2026-02-07 06:13:31,828 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 01:13:33] 2026-02-07 06:13:31,842 [wrapper] pilotpid: 1989045
[2026-02-07 01:13:33] 2026-02-07 06:13:31,859 [wrapper] Pilot exit status: 0
[2026-02-07 01:13:33] 2026-02-07 06:13:31,977 [wrapper] pandaids: 6998616039
[2026-02-07 01:13:33] 2026-02-07 06:13:32,311 [wrapper] cleanup supervisor_pilot 2353376 1989046
[2026-02-07 01:13:33] 2026-02-07 06:13:32,324 [wrapper] Test setup, not cleaning
[2026-02-07 01:13:33] 2026-02-07 06:13:32,353 [wrapper] apfmon messages muted
[2026-02-07 01:13:33] 2026-02-07 06:13:32,363 [wrapper] ==== wrapper stdout END ====
[2026-02-07 01:13:33] 2026-02-07 06:13:32,400 [wrapper] ==== wrapper stderr END ====
[2026-02-07 01:13:33]  *** Error codes and diagnostics ***
[2026-02-07 01:13:33]     "exeErrorCode": 0,
[2026-02-07 01:13:33]     "exeErrorDiag": "",
[2026-02-07 01:13:33]     "pilotErrorCode": 0,
[2026-02-07 01:13:33]     "pilotErrorDiag": "",
[2026-02-07 01:13:33]  *** Listing of results directory ***
[2026-02-07 01:13:33] total 666060
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 17:50 queuedata.json
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 17:50 pilot3.tar.gz
[2026-02-07 01:13:33] -rwx------. 1 boincer umatlas     36322 Feb  6 17:51 runpilot2-wrapper.sh
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas       100 Feb  7 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 01:13:33] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  7 00:02 run_atlas
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas       105 Feb  7 00:02 job.xml
[2026-02-07 01:13:33] -rw-r--r--. 2 boincer umatlas 495744915 Feb  7 00:03 EVNT.48310747._000124.pool.root.1
[2026-02-07 01:13:33] drwxrwx--x. 2 boincer umatlas      4096 Feb  7 00:03 shared
[2026-02-07 01:13:33] -rw-r--r--. 2 boincer umatlas    597953 Feb  7 00:03 input.tar.gz
[2026-02-07 01:13:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 00:03 start_atlas.sh
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas         0 Feb  7 00:03 boinc_lockfile
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas      2523 Feb  7 00:03 pandaJob.out
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas        57 Feb  7 00:03 setup.sh.local
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas   1009504 Feb  7 00:04 agis_schedconf.cvmfs.json
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas   1513088 Feb  7 00:04 agis_ddmendpoints.agis.ALL.json
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas       429 Feb  7 00:05 workernode_map.json
[2026-02-07 01:13:33] drwx------. 5 boincer umatlas      4096 Feb  7 00:05 pilot3
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas      7172 Feb  7 01:10 init_data.xml
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas 180443860 Feb  7 01:11 HITS.48310749._006395.pool.root.1
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas       531 Feb  7 01:11 boinc_task_state.xml
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas      1058 Feb  7 01:12 memory_monitor_summary.json
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas    404357 Feb  7 01:12 log.48310749._006395.job.log.tgz.1
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas      6355 Feb  7 01:12 heartbeat.json
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas        95 Feb  7 01:13 pilot_heartbeat.json
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas        27 Feb  7 01:13 wrapper_checkpoint.txt
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 01:13 boinc_mmap_file
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas      4893 Feb  7 01:13 pilotlog.txt
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas    551046 Feb  7 01:13 log.48310749._006395.job.log.1
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas       357 Feb  7 01:13 output.list
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas       620 Feb  7 01:13 runtime_log
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas    972800 Feb  7 01:13 result.tar.gz
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas      9333 Feb  7 01:13 runtime_log.err
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas       655 Feb  7 01:13 Q7YMDmlqj88n9Rq4apOajLDm4fhM0noT9bVooX4SDmgeZKDm1XsqXn.diag
[2026-02-07 01:13:33] -rw-r--r--. 1 boincer umatlas     21326 Feb  7 01:13 stderr.txt
[2026-02-07 01:13:33] HITS file was successfully produced:
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas 180443860 Feb  7 01:11 shared/HITS.pool.root.1
[2026-02-07 01:13:33]  *** Contents of shared directory: ***
[2026-02-07 01:13:33] total 661904
[2026-02-07 01:13:33] -rw-r--r--. 2 boincer umatlas 495744915 Feb  7 00:03 ATLAS.root_0
[2026-02-07 01:13:33] -rw-r--r--. 2 boincer umatlas    597953 Feb  7 00:03 input.tar.gz
[2026-02-07 01:13:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  7 00:03 start_atlas.sh
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas 180443860 Feb  7 01:11 HITS.pool.root.1
[2026-02-07 01:13:33] -rw-------. 1 boincer umatlas    972800 Feb  7 01:13 result.tar.gz
01:13:35 (1968962): run_atlas exited; CPU time 21010.014229
01:13:35 (1968962): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN