Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:25:20 (718746): wrapper (7.7.26015): starting
23:25:20 (718746): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 23:25:20] Arguments: --nthreads 8
[2026-02-06 23:25:20] Threads: 8
[2026-02-06 23:25:20] Checking for CVMFS
[2026-02-06 23:25:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 23:25:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 23:25:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 23:25:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 23:25:23] 2.13.3.0 12357 134640 256492 155971 1 516 32169462 32503808 43570 16776704 0 1856188608 99.611 1844644610 47887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-06 23:25:23] CVMFS is ok
[2026-02-06 23:25:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 23:25:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 23:25:23] Further information can be found at the LHC@home message board.
[2026-02-06 23:25:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 23:25:23] Checking for apptainer binary...
[2026-02-06 23:25:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 23:25:23] Running /usr/bin/apptainer --version
[2026-02-06 23:25:23] apptainer version 1.4.5-2.el9
[2026-02-06 23:25:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 23:25:23] c8-7-2.aglt2.org
[2026-02-06 23:25:23] apptainer works
[2026-02-06 23:25:23] Set ATHENA_PROC_NUMBER=8
[2026-02-06 23:25:23] Set ATHENA_CORE_NUMBER=8
[2026-02-06 23:25:23] Starting ATLAS job with PandaID=6998615968
[2026-02-06 23:25:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 01:22:13]  *** The last 200 lines of the pilot log: ***
[2026-02-07 01:22:13]  guid=b5fe6d4a-a215-4384-b2b9-a95e0c9bf296
[2026-02-07 01:22:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-07 01:22:13]  is_altstaged=None
[2026-02-07 01:22:13]  is_tar=False
[2026-02-07 01:22:13]  lfn=log.48310749._006324.job.log.tgz.1
[2026-02-07 01:22:13]  mtime=0
[2026-02-07 01:22:13]  protocol_id=None
[2026-02-07 01:22:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-07 01:22:13]  replicas=None
[2026-02-07 01:22:13]  scope=mc23_13p6TeV
[2026-02-07 01:22:13]  status=None
[2026-02-07 01:22:13]  status_code=0
[2026-02-07 01:22:13]  storage_token=
[2026-02-07 01:22:13]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6998615968/log.48310749._006324.job.log.tgz.1
[2026-02-07 01:22:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/32/log.48310749._006324.job.log.tgz.1
[2026-02-07 01:22:13]  workdir=None
[2026-02-07 01:22:13] ]
[2026-02-07 01:22:13] 2026-02-07 05:57:09,961 | INFO     | transferring file log.48310749._006324.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6998615968/log.48310749._006324.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-07 01:22:13] 2026-02-07 05:57:09,961 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6998615968/log.48310749._006324.job.log.tgz.1 /tmp/boinchome/slots/8/log.48310749._006324.job
[2026-02-07 01:22:13] 2026-02-07 05:57:10,088 | INFO     | adding to output.list: log.48310749._006324.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/32/log.48310749._006324.job.log.tg
[2026-02-07 01:22:13] 2026-02-07 05:57:10,089 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-07 01:22:13] 2026-02-07 05:57:10,089 | INFO     | summary of transferred files:
[2026-02-07 01:22:13] 2026-02-07 05:57:10,089 | INFO     |  -- lfn=log.48310749._006324.job.log.tgz.1, status_code=0, status=transferred
[2026-02-07 01:22:13] 2026-02-07 05:57:10,089 | INFO     | stage-out finished correctly
[2026-02-07 01:22:13] 2026-02-07 05:57:11,134 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-07 01:22:13] 2026-02-07 05:57:11,545 | INFO     | job 6998615968 has state=finished
[2026-02-07 01:22:13] 2026-02-07 05:57:11,545 | INFO     | preparing for final server update for job 6998615968 in state='finished'
[2026-02-07 01:22:13] 2026-02-07 05:57:11,545 | INFO     | reading metadata from: /tmp/boinchome/slots/8/PanDA_Pilot-6998615968/jobReport.json
[2026-02-07 01:22:13] 2026-02-07 05:57:11,547 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/8/workernode_map.json
[2026-02-07 01:22:13] 2026-02-07 05:57:11,547 | INFO     | this job has now completed (state=finished)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,547 | INFO     | log transfer has been attempted: DONE
[2026-02-07 01:22:13] 2026-02-07 05:57:11,547 | INFO     | job 6998615968 has finished - writing final server update
[2026-02-07 01:22:13] 2026-02-07 05:57:11,548 | INFO     | total number of processed events: 400 (read)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,609 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6998615968/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,609 | INFO     | extracted standard info from prmon json
[2026-02-07 01:22:13] 2026-02-07 05:57:11,610 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 01:22:13] 2026-02-07 05:57:11,610 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 01:22:13] 2026-02-07 05:57:11,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 01:22:13] 2026-02-07 05:57:11,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 01:22:13] 2026-02-07 05:57:11,612 | INFO     | fitting pss+swap vs Time
[2026-02-07 01:22:13] 2026-02-07 05:57:11,612 | INFO     | sum of square deviations: 158745493.38749978
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | sum of deviations: 10533943209.450006
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | mean x: 1770441230.5875
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | mean y: 2442007.65
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | intersect: -117479490743.36856
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | chi2: 0.9045432551207921
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | current memory leak: 66.36 B/s (using 80 data points, chi2=0.90)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | ..............................
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . Timing measurements:
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . get job = 0 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . initial setup = 34 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . payload setup = 47 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . stage-in = 0 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . payload execution = 5339 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . stage-out = 4 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,613 | INFO     | . log creation = 1 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,614 | INFO     | ..............................
[2026-02-07 01:22:13] 2026-02-07 05:57:11,650 | INFO     | time since job start (5409s) is within the limit (349056.0s)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | 
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | job summary report
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | --------------------------------------------------
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | PanDA job id: 6998615968
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | task id: 48310749
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | errors: (none)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | pilot state: finished 
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | transexitcode: 0
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | exeerrorcode: 0
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | exeerrordiag: 
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | exitcode: 0
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | exitmsg: OK
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | cpuconsumptiontime: 21201 s
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | nevents: 400
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | neventsw: 0
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | pid: 737002
[2026-02-07 01:22:13] 2026-02-07 05:57:11,857 | INFO     | pgrp: 737002
[2026-02-07 01:22:13] 2026-02-07 05:57:11,858 | INFO     | corecount: 8
[2026-02-07 01:22:13] 2026-02-07 05:57:11,858 | INFO     | event service: False
[2026-02-07 01:22:13] 2026-02-07 05:57:11,858 | INFO     | sizes: {0: 2266114, 1: 2283065, 11: 2283065, 5391: 2309622, 5392: 2309621, 5397: 2318675, 5398: 2319053}
[2026-02-07 01:22:13] 2026-02-07 05:57:11,858 | INFO     | --------------------------------------------------
[2026-02-07 01:22:13] 2026-02-07 05:57:11,858 | INFO     | 
[2026-02-07 01:22:13] 2026-02-07 05:57:11,858 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,960 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 01:22:13] 2026-02-07 05:57:11,960 | INFO     | job 6998615968 has completed (purged errors)
[2026-02-07 01:22:13] 2026-02-07 05:57:11,960 | INFO     | overall cleanup function is called
[2026-02-07 01:22:13] 2026-02-07 05:57:12,635 | INFO     | number of running child processes to parent process 737002: 1
[2026-02-07 01:22:13] 2026-02-07 05:57:12,635 | INFO     | maximum number of monitored processes: 7
[2026-02-07 01:22:13] 2026-02-07 05:57:12,635 | INFO     | aborting job monitoring since job object (job id=6998615968) has expired
[2026-02-07 01:22:13] 2026-02-07 05:57:12,971 | INFO     | --- collectZombieJob: --- 10, [737002]
[2026-02-07 01:22:13] 2026-02-07 05:57:12,971 | INFO     | zombie collector waiting for pid 737002
[2026-02-07 01:22:13] 2026-02-07 05:57:12,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 01:22:13] 2026-02-07 05:57:12,971 | INFO     | collected zombie processes
[2026-02-07 01:22:13] 2026-02-07 05:57:12,971 | INFO     | will attempt to kill all subprocesses of pid=737002
[2026-02-07 01:22:13] 2026-02-07 05:57:14,541 | INFO     | process IDs to be killed: [737002] (in reverse order)
[2026-02-07 01:22:13] 2026-02-07 05:57:16,555 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 01:22:13] 2026-02-07 05:57:16,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 01:22:13] 2026-02-07 05:57:16,663 | INFO     | did not find any defunct processes belonging to 737002
[2026-02-07 01:22:13] 2026-02-07 05:57:16,772 | INFO     | did not find any defunct processes belonging to 737002
[2026-02-07 01:22:13] 2026-02-07 05:57:16,772 | INFO     | ready for new job
[2026-02-07 01:22:13] 2026-02-07 05:57:16,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 01:22:13] 2026-02-07 05:57:16,774 | INFO     | **************************************
[2026-02-07 01:22:13] 2026-02-07 05:57:16,774 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 01:22:13] 2026-02-07 05:57:16,774 | INFO     | **************************************
[2026-02-07 01:22:13] 2026-02-07 05:57:16,774 | INFO     | 
[2026-02-07 01:22:13] 2026-02-07 05:57:16,787 | INFO     | architecture information:
[2026-02-07 01:22:13] 2026-02-07 05:57:16,787 | INFO     | executing command: cat /etc/os-release
[2026-02-07 01:22:13] 2026-02-07 05:57:16,866 | INFO     | cat /etc/os-release:
[2026-02-07 01:22:13] NAME="CentOS Linux"
[2026-02-07 01:22:13] VERSION="7 (Core)"
[2026-02-07 01:22:13] ID="centos"
[2026-02-07 01:22:13] ID_LIKE="rhel fedora"
[2026-02-07 01:22:13] VERSION_ID="7"
[2026-02-07 01:22:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 01:22:13] ANSI_COLOR="0;31"
[2026-02-07 01:22:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 01:22:13] HOME_URL="https://www.centos.org/"
[2026-02-07 01:22:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 01:22:13] 
[2026-02-07 01:22:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 01:22:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 01:22:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 01:22:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 01:22:13] 
[2026-02-07 01:22:13] 2026-02-07 05:57:16,866 | INFO     | **************************************
[2026-02-07 01:22:13] 2026-02-07 05:57:17,370 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-02-07 01:22:13] 2026-02-07 05:57:17,457 | INFO     | sufficient remaining disk space (83651198976 B)
[2026-02-07 01:22:13] 2026-02-07 05:57:17,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 01:22:13] 2026-02-07 05:57:17,458 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 01:22:13] 2026-02-07 05:57:17,458 | INFO     | update_server=False
[2026-02-07 01:22:13] 2026-02-07 05:57:17,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 01:22:13] 2026-02-07 05:57:17,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 01:22:13] 2026-02-07 05:57:17,588 | INFO     | all payload control threads have been joined
[2026-02-07 01:22:13] 2026-02-07 05:57:17,651 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 01:22:13] 2026-02-07 05:57:17,651 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 01:22:13] 2026-02-07 05:57:17,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 01:22:13] 2026-02-07 05:57:17,651 | INFO     | will abort loop
[2026-02-07 01:22:13] 2026-02-07 05:57:17,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 01:22:13] 2026-02-07 05:57:17,854 | INFO     | all data control threads have been joined
[2026-02-07 01:22:13] 2026-02-07 05:57:17,856 | INFO     | all job control threads have been joined
[2026-02-07 01:22:13] 2026-02-07 05:57:18,463 | INFO     | [job] retrieve thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,465 | INFO     | [job] queue monitor thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,494 | INFO     | [payload] failed_post thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,518 | INFO     | [payload] validate_post thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,594 | INFO     | [payload] control thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,657 | INFO     | [job] job monitor thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,744 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 01:22:13] 2026-02-07 05:57:18,761 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,761 | INFO     | [job] validate thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,762 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,863 | INFO     | [data] control thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:18,863 | INFO     | [job] control thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:19,870 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:19,965 | INFO     | [data] copytool_in thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:20,784 | INFO     | [data] copytool_out thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:21,698 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 01:22:13] 2026-02-07 05:57:46,372 | INFO     | PID=727659 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 01:22:13] 2026-02-07 05:57:46,372 | INFO     | .. there are 54 such processes running
[2026-02-07 01:22:13] 2026-02-07 05:57:46,377 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 01:22:13] 2026-02-07 05:57:46,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 01:22:13] 2026-02-07 05:57:46,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 01:22:13] 2026-02-07 05:58:11,228 | INFO     | [monitor] cgroup control has ended
[2026-02-07 01:22:13] 2026-02-07 05:58:11,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716359419712)>', '<ExcThread(monitor, started 140715870906112)>']
[2026-02-07 01:22:13] 2026-02-07 05:58:11,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 01:22:13] 2026-02-07 05:58:11,661 | INFO     | [monitor] control thread has ended
[2026-02-07 01:22:13] 2026-02-07 05:58:16,292 | INFO     | all workflow threads have been joined
[2026-02-07 01:22:13] 2026-02-07 05:58:16,294 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 01:22:13] 2026-02-07 05:58:16,294 | INFO     | traces error code: 0
[2026-02-07 01:22:13] 2026-02-07 05:58:16,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 01:22:13] 2026-02-07 05:58:17,953 [wrapper] ==== pilot stdout END ====
[2026-02-07 01:22:13] 2026-02-07 05:58:17,964 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 01:22:13] 2026-02-07 05:58:17,975 [wrapper] pilotpid: 727659
[2026-02-07 01:22:13] 2026-02-07 05:58:17,989 [wrapper] Pilot exit status: 0
[2026-02-07 01:22:13] 2026-02-07 05:58:18,120 [wrapper] pandaids: 6998615968
[2026-02-07 01:22:13] 2026-02-07 05:58:18,348 [wrapper] cleanup supervisor_pilot 1638259 727660
[2026-02-07 01:22:13] 2026-02-07 05:58:18,435 [wrapper] Test setup, not cleaning
[2026-02-07 01:22:13] 2026-02-07 05:58:18,532 [wrapper] apfmon messages muted
[2026-02-07 01:22:13] 2026-02-07 05:58:18,648 [wrapper] ==== wrapper stdout END ====
[2026-02-07 01:22:13] 2026-02-07 05:58:18,664 [wrapper] ==== wrapper stderr END ====
[2026-02-07 01:22:13]  *** Error codes and diagnostics ***
[2026-02-07 01:22:13]     "exeErrorCode": 0,
[2026-02-07 01:22:13]     "exeErrorDiag": "",
[2026-02-07 01:22:13]     "pilotErrorCode": 0,
[2026-02-07 01:22:13]     "pilotErrorDiag": "",
[2026-02-07 01:22:13]  *** Listing of results directory ***
[2026-02-07 01:22:13] total 665540
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 17:50 queuedata.json
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 17:50 pilot3.tar.gz
[2026-02-07 01:22:13] -rwx------. 1 boincer umatlas     36322 Feb  6 17:51 runpilot2-wrapper.sh
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas       100 Feb  6 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 01:22:13] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 23:25 run_atlas
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas       105 Feb  6 23:25 job.xml
[2026-02-07 01:22:13] -rw-r--r--. 2 boincer umatlas 492791585 Feb  6 23:25 EVNT.48310747._000123.pool.root.1
[2026-02-07 01:22:13] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 23:25 start_atlas.sh
[2026-02-07 01:22:13] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 23:25 shared
[2026-02-07 01:22:13] -rw-r--r--. 2 boincer umatlas    597949 Feb  6 23:25 input.tar.gz
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas         0 Feb  6 23:25 boinc_lockfile
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas      2522 Feb  6 23:25 pandaJob.out
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas        57 Feb  6 23:25 setup.sh.local
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas   1009504 Feb  6 23:26 agis_schedconf.cvmfs.json
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas   1513088 Feb  6 23:26 agis_ddmendpoints.agis.ALL.json
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas       430 Feb  6 23:26 workernode_map.json
[2026-02-07 01:22:13] drwx------. 5 boincer umatlas      4096 Feb  6 23:27 pilot3
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas 182738093 Feb  7 00:56 HITS.48310749._006324.pool.root.1
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas       530 Feb  7 00:56 boinc_task_state.xml
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas      1054 Feb  7 00:57 memory_monitor_summary.json
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas    335671 Feb  7 00:57 log.48310749._006324.job.log.tgz.1
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas      6366 Feb  7 00:57 heartbeat.json
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas        95 Feb  7 00:57 pilot_heartbeat.json
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas      5005 Feb  7 00:58 pilotlog.txt
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas    685995 Feb  7 00:58 log.48310749._006324.job.log.1
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas       357 Feb  7 00:58 output.list
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas       620 Feb  7 00:58 runtime_log
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas   1034240 Feb  7 00:58 result.tar.gz
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas       655 Feb  7 00:58 tSFLDmZqj88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6yZKDm1aWQJo.diag
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas      9331 Feb  7 00:58 runtime_log.err
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas      7170 Feb  7 01:18 init_data.xml
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas        27 Feb  7 01:22 wrapper_checkpoint.txt
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 01:22 boinc_mmap_file
[2026-02-07 01:22:13] -rw-r--r--. 1 boincer umatlas     21356 Feb  7 01:22 stderr.txt
[2026-02-07 01:22:13] HITS file was successfully produced:
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas 182738093 Feb  7 00:56 shared/HITS.pool.root.1
[2026-02-07 01:22:13]  *** Contents of shared directory: ***
[2026-02-07 01:22:13] total 661320
[2026-02-07 01:22:13] -rw-r--r--. 2 boincer umatlas 492791585 Feb  6 23:25 ATLAS.root_0
[2026-02-07 01:22:13] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 23:25 start_atlas.sh
[2026-02-07 01:22:13] -rw-r--r--. 2 boincer umatlas    597949 Feb  6 23:25 input.tar.gz
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas 182738093 Feb  7 00:56 HITS.pool.root.1
[2026-02-07 01:22:13] -rw-------. 1 boincer umatlas   1034240 Feb  7 00:58 result.tar.gz
01:22:15 (718746): run_atlas exited; CPU time 21391.729872
01:22:15 (718746): called boinc_finish(0)

</stderr_txt>
]]>

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