Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:00:32 (670368): wrapper (7.7.26015): starting
02:00:32 (670368): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 02:00:32] Arguments: --nthreads 8
[2026-02-07 02:00:32] Threads: 8
[2026-02-07 02:00:32] Checking for CVMFS
[2026-02-07 02:00:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 02:00:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 02:00:33] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 02:00:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 02:00:33] 2.11.3.0 1652368 98268 161852 155978 0 622 31711544 45568001 20978 130560 0 540421412 99.794 329513532 21240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-07 02:00:33] CVMFS is ok
[2026-02-07 02:00:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 02:00:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 02:00:33] Further information can be found at the LHC@home message board.
[2026-02-07 02:00:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 02:00:33] Checking for apptainer binary...
[2026-02-07 02:00:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 02:00:33] Running /usr/bin/apptainer --version
[2026-02-07 02:00:33] apptainer version 1.4.1-1.el9
[2026-02-07 02:00:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 02:00:33] wns0007.triumf.lcg
[2026-02-07 02:00:33] apptainer works
[2026-02-07 02:00:33] Set ATHENA_PROC_NUMBER=8
[2026-02-07 02:00:33] Set ATHENA_CORE_NUMBER=8
[2026-02-07 02:00:33] Starting ATLAS job with PandaID=6999411112
[2026-02-07 02:00:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 02:05:26]  *** The last 200 lines of the pilot log: ***
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | wrong length of table data, x=[1770458525.0], y=[1189.0] (must be same and length>=4)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | ..............................
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . Timing measurements:
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . get job = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . initial setup = 16 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . payload setup = 19 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . stage-in = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . payload execution = 51 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . stage-out = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . log creation = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | ..............................
[2026-02-07 02:05:26] 2026-02-07 10:04:42,860 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 02:05:26] 2026-02-07 10:04:42,860 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999411112/pilotlog.txt
[2026-02-07 02:05:26] 2026-02-07 10:04:42,892 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-07 02:05:26] - Log from pilotlog.txt -
[2026-02-07 02:05:26] 2026-02-07 10:04:42,852 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6999411112/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,857 | INFO     | extracted standard info from prmon json
[2026-02-07 02:05:26] 2026-02-07 10:04:42,857 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 02:05:26] 2026-02-07 10:04:42,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | wrong length of table data, x=[1770458525.0], y=[1189.0] (must be same and length>=4)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | ..............................
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . Timing measurements:
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . get job = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . initial setup = 16 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . payload setup = 19 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . stage-in = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . payload execution = 51 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . stage-out = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . log creation = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | ..............................
[2026-02-07 02:05:26] 2026-02-07 10:04:42,860 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 02:05:26] 2026-02-07 10:04:42,860 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999411112/pilotlog.txt
[2026-02-07 02:05:26] 2026-02-07 10:04:42,892 | WARNING  | 
[2026-02-07 02:05:26] [begin log extracts]
[2026-02-07 02:05:26] - Log from pilotlog.txt -
[2026-02-07 02:05:26] 2026-02-07 10:04:42,852 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6999411112/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,857 | INFO     | extracted standard info from prmon json
[2026-02-07 02:05:26] 2026-02-07 10:04:42,857 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 02:05:26] 2026-02-07 10:04:42,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 02:05:26] 2026-02-07 10:04:42,858 | WARNING  | wrong length of table data, x=[1770458525.0], y=[1189.0] (must be same and length>=4)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | ..............................
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . Timing measurements:
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . get job = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . initial setup = 16 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . payload setup = 19 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . stage-in = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . payload execution = 51 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . stage-out = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | . log creation = 0 s
[2026-02-07 02:05:26] 2026-02-07 10:04:42,859 | INFO     | ..............................
[2026-02-07 02:05:26] 2026-02-07 10:04:42,860 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-07 02:05:26] 2026-02-07 10:04:42,860 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999411112/pilotlog.txt
[2026-02-07 02:05:26] [end log extracts]
[2026-02-07 02:05:26] 2026-02-07 10:04:42,892 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-07 02:05:26] 2026-02-07 10:04:42,893 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | 
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | job summary report
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | --------------------------------------------------
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | PanDA job id: 6999411112
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | task id: 48310749
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-07 02:02:35,572 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-07 02:05:26] 2026-02-07 10:04:43,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | pilot state: failed 
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | transexitcode: 65
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | exeerrorcode: 65
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | exitcode: 65
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | cpuconsumptiontime: 14 s
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | nevents: 0
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | neventsw: 0
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | pid: 678710
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | pgrp: 678710
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | corecount: 8
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | event service: False
[2026-02-07 02:05:26] 2026-02-07 10:04:43,328 | INFO     | sizes: {0: 2281949, 1: 2245043, 2: 2283064, 13: 2283092, 74: 2306362, 75: 2310786, 76: 2310786, 191: 2310980}
[2026-02-07 02:05:26] 2026-02-07 10:04:43,329 | INFO     | --------------------------------------------------
[2026-02-07 02:05:26] 2026-02-07 10:04:43,329 | INFO     | 
[2026-02-07 02:05:26] 2026-02-07 10:04:43,329 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-07 02:05:26] 2026-02-07 10:04:43,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | job 6999411112 has completed (purged errors)
[2026-02-07 02:05:26] 2026-02-07 10:04:43,465 | INFO     | overall cleanup function is called
[2026-02-07 02:05:26] 2026-02-07 10:04:44,119 | INFO     | PID=674092 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 02:05:26] 2026-02-07 10:04:44,119 | INFO     | .. there are 33 such processes running
[2026-02-07 02:05:26] 2026-02-07 10:04:44,604 | INFO     | --- collectZombieJob: --- 10, [678710]
[2026-02-07 02:05:26] 2026-02-07 10:04:44,604 | INFO     | zombie collector waiting for pid 678710
[2026-02-07 02:05:26] 2026-02-07 10:04:44,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 02:05:26] 2026-02-07 10:04:44,604 | INFO     | collected zombie processes
[2026-02-07 02:05:26] 2026-02-07 10:04:44,604 | INFO     | will attempt to kill all subprocesses of pid=678710
[2026-02-07 02:05:26] 2026-02-07 10:04:45,260 | INFO     | process IDs to be killed: [678710] (in reverse order)
[2026-02-07 02:05:26] 2026-02-07 10:04:45,484 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 02:05:26] 2026-02-07 10:04:45,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 02:05:26] 2026-02-07 10:04:45,492 | INFO     | did not find any defunct processes belonging to 678710
[2026-02-07 02:05:26] 2026-02-07 10:04:45,499 | INFO     | did not find any defunct processes belonging to 678710
[2026-02-07 02:05:26] 2026-02-07 10:04:45,499 | INFO     | ready for new job
[2026-02-07 02:05:26] 2026-02-07 10:04:45,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 02:05:26] 2026-02-07 10:04:45,500 | INFO     | **************************************
[2026-02-07 02:05:26] 2026-02-07 10:04:45,500 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 02:05:26] 2026-02-07 10:04:45,500 | INFO     | **************************************
[2026-02-07 02:05:26] 2026-02-07 10:04:45,500 | INFO     | 
[2026-02-07 02:05:26] 2026-02-07 10:04:45,502 | INFO     | architecture information:
[2026-02-07 02:05:26] 2026-02-07 10:04:45,502 | INFO     | executing command: cat /etc/os-release
[2026-02-07 02:05:26] 2026-02-07 10:04:45,528 | INFO     | cat /etc/os-release:
[2026-02-07 02:05:26] NAME="CentOS Linux"
[2026-02-07 02:05:26] VERSION="7 (Core)"
[2026-02-07 02:05:26] ID="centos"
[2026-02-07 02:05:26] ID_LIKE="rhel fedora"
[2026-02-07 02:05:26] VERSION_ID="7"
[2026-02-07 02:05:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 02:05:26] ANSI_COLOR="0;31"
[2026-02-07 02:05:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 02:05:26] HOME_URL="https://www.centos.org/"
[2026-02-07 02:05:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 02:05:26] 
[2026-02-07 02:05:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 02:05:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 02:05:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 02:05:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 02:05:26] 
[2026-02-07 02:05:26] 2026-02-07 10:04:45,528 | INFO     | **************************************
[2026-02-07 02:05:26] 2026-02-07 10:04:46,030 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-07 02:05:26] 2026-02-07 10:04:46,110 | INFO     | sufficient remaining disk space (1406120493056 B)
[2026-02-07 02:05:26] 2026-02-07 10:04:46,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 02:05:26] 2026-02-07 10:04:46,111 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 02:05:26] 2026-02-07 10:04:46,111 | INFO     | update_server=False
[2026-02-07 02:05:26] 2026-02-07 10:04:46,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 02:05:26] 2026-02-07 10:04:46,220 | INFO     | all payload control threads have been joined
[2026-02-07 02:05:26] 2026-02-07 10:04:46,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 02:05:26] 2026-02-07 10:04:46,231 | INFO     | aborting loop
[2026-02-07 02:05:26] 2026-02-07 10:04:46,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 02:05:26] 2026-02-07 10:04:46,375 | INFO     | all data control threads have been joined
[2026-02-07 02:05:26] 2026-02-07 10:04:46,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 02:05:26] 2026-02-07 10:04:47,117 | INFO     | [job] retrieve thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,202 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,226 | INFO     | [payload] control thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,237 | INFO     | [job] job monitor thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,349 | INFO     | [data] copytool_in thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,358 | INFO     | all job control threads have been joined
[2026-02-07 02:05:26] 2026-02-07 10:04:47,381 | INFO     | [data] control thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,627 | INFO     | [job] validate thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,759 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,864 | INFO     | [payload] validate_post thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:47,989 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:48,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 02:05:26] 2026-02-07 10:04:48,244 | INFO     | [data] copytool_out thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:48,364 | INFO     | [job] control thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:48,590 | INFO     | [payload] failed_post thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:48,613 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:49,041 | INFO     | [job] queue monitor thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:04:50,736 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 02:05:26] 2026-02-07 10:05:16,789 | INFO     | PID=674092 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 02:05:26] 2026-02-07 10:05:16,789 | INFO     | .. there are 33 such processes running
[2026-02-07 02:05:26] 2026-02-07 10:05:16,790 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 02:05:26] 2026-02-07 10:05:16,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 02:05:26] 2026-02-07 10:05:16,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 02:05:26] 2026-02-07 10:05:19,013 | INFO     | [monitor] cgroup control has ended
[2026-02-07 02:05:26] 2026-02-07 10:05:19,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401699731264)>', '<ExcThread(monitor, started 140401306482432)>']
[2026-02-07 02:05:26] 2026-02-07 10:05:19,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 02:05:26] 2026-02-07 10:05:19,812 | INFO     | [monitor] control thread has ended
[2026-02-07 02:05:26] 2026-02-07 10:05:24,424 | INFO     | all workflow threads have been joined
[2026-02-07 02:05:26] 2026-02-07 10:05:24,424 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 02:05:26] 2026-02-07 10:05:24,424 | INFO     | traces error code: 0
[2026-02-07 02:05:26] 2026-02-07 10:05:24,424 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 02:05:26] 2026-02-07 10:05:24,704 [wrapper] ==== pilot stdout END ====
[2026-02-07 02:05:26] 2026-02-07 10:05:24,743 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 02:05:26] 2026-02-07 10:05:24,790 [wrapper] pilotpid: 674092
[2026-02-07 02:05:26] 2026-02-07 10:05:24,813 [wrapper] Pilot exit status: 0
[2026-02-07 02:05:26] 2026-02-07 10:05:24,861 [wrapper] pandaids: 6999411112
[2026-02-07 02:05:26] 2026-02-07 10:05:25,277 [wrapper] cleanup supervisor_pilot  674098 674093
[2026-02-07 02:05:26] 2026-02-07 10:05:25,318 [wrapper] Test setup, not cleaning
[2026-02-07 02:05:26] 2026-02-07 10:05:25,356 [wrapper] apfmon messages muted
[2026-02-07 02:05:26] 2026-02-07 10:05:25,404 [wrapper] ==== wrapper stdout END ====
[2026-02-07 02:05:26] 2026-02-07 10:05:25,446 [wrapper] ==== wrapper stderr END ====
[2026-02-07 02:05:26]  *** Error codes and diagnostics ***
[2026-02-07 02:05:26]     "exeErrorCode": 65,
[2026-02-07 02:05:26]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 02:05:26]     "pilotErrorCode": 1305,
[2026-02-07 02:05:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-07 02:05:26]  *** Listing of results directory ***
[2026-02-07 02:05:26] total 487316
[2026-02-07 02:05:26] -rwx------. 1 boinc boinc     36322 Feb  6 19:51 runpilot2-wrapper.sh
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc    584627 Feb  6 19:53 pilot3.tar.gz
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc      5111 Feb  6 19:54 queuedata.json
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc       100 Feb  7 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 02:05:26] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 02:00 run_atlas
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc       105 Feb  7 02:00 job.xml
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc      6443 Feb  7 02:00 init_data.xml
[2026-02-07 02:05:26] -rw-r--r--. 2 boinc boinc 494860785 Feb  7 02:00 EVNT.48310747._000131.pool.root.1
[2026-02-07 02:05:26] drwxrwx--x. 2 boinc boinc      4096 Feb  7 02:00 shared
[2026-02-07 02:05:26] -rw-r--r--. 2 boinc boinc    597954 Feb  7 02:00 input.tar.gz
[2026-02-07 02:05:26] -rw-r--r--. 2 boinc boinc     15845 Feb  7 02:00 start_atlas.sh
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc         0 Feb  7 02:00 boinc_lockfile
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc      2523 Feb  7 02:00 pandaJob.out
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc   1009504 Feb  7 02:01 agis_schedconf.cvmfs.json
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc   1513088 Feb  7 02:01 agis_ddmendpoints.agis.ALL.json
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc       442 Feb  7 02:01 workernode_map.json
[2026-02-07 02:05:26] drwx------. 5 boinc boinc      4096 Feb  7 02:01 pilot3
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc       523 Feb  7 02:02 boinc_task_state.xml
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc       951 Feb  7 02:02 memory_monitor_summary.json
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc     21618 Feb  7 02:02 log.48310749._006967.job.log.tgz.1
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc      7010 Feb  7 02:04 heartbeat.json
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc        95 Feb  7 02:05 pilot_heartbeat.json
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc      4818 Feb  7 02:05 pilotlog.txt
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc      8192 Feb  7 02:05 boinc_mmap_file
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc        22 Feb  7 02:05 wrapper_checkpoint.txt
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc     86407 Feb  7 02:05 log.48310749._006967.job.log.1
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc       188 Feb  7 02:05 output.list
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc       620 Feb  7 02:05 runtime_log
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc    122880 Feb  7 02:05 result.tar.gz
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc      8633 Feb  7 02:05 runtime_log.err
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc       644 Feb  7 02:05 bO3NDmnWo88n9Rq4apOajLDm4fhM0noT9bVooX4SDmIIaKDmovZ7hm.diag
[2026-02-07 02:05:26] -rw-r--r--. 1 boinc boinc     21895 Feb  7 02:05 stderr.txt
[2026-02-07 02:05:26] No HITS result produced
[2026-02-07 02:05:26]  *** Contents of shared directory: ***
[2026-02-07 02:05:26] total 483988
[2026-02-07 02:05:26] -rw-r--r--. 2 boinc boinc 494860785 Feb  7 02:00 ATLAS.root_0
[2026-02-07 02:05:26] -rw-r--r--. 2 boinc boinc    597954 Feb  7 02:00 input.tar.gz
[2026-02-07 02:05:26] -rw-r--r--. 2 boinc boinc     15845 Feb  7 02:00 start_atlas.sh
[2026-02-07 02:05:26] -rw-------. 1 boinc boinc    122880 Feb  7 02:05 result.tar.gz
02:05:28 (670368): run_atlas exited; CPU time 22.008645
02:05:28 (670368): called boinc_finish(0)

</stderr_txt>
]]>

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