Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-07 16:44:34 (41452): vboxwrapper version 26210
2026-02-07 16:44:34 (41452): BOINC client version: 8.2.8
2026-02-07 16:44:34 (41452): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-07 16:44:34 (41452): Successfully copied 'init_data.xml' to the shared directory.
2026-02-07 16:44:35 (41452): Create VM. (boinc_d5c120c32e0d409a, slot#2)
2026-02-07 16:44:35 (41452): Setting Memory Size for VM. (4800MB)
2026-02-07 16:44:35 (41452): Setting CPU Count for VM. (8)
2026-02-07 16:44:36 (41452): Setting Chipset Options for VM.
2026-02-07 16:44:36 (41452): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-07 16:44:36 (41452): Setting Boot Options for VM.
2026-02-07 16:44:37 (41452): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-07 16:44:37 (41452): Enabling VM Network Access.
2026-02-07 16:44:37 (41452): Disabling USB Support for VM.
2026-02-07 16:44:38 (41452): Disabling COM Port Support for VM.
2026-02-07 16:44:38 (41452): Disabling LPT Port Support for VM.
2026-02-07 16:44:38 (41452): Disabling Audio Support for VM.
2026-02-07 16:44:38 (41452): Disabling Clipboard Support for VM.
2026-02-07 16:44:39 (41452): Disabling Drag and Drop Support for VM.
2026-02-07 16:44:39 (41452): Adding storage controller(s) to VM.
2026-02-07 16:44:39 (41452): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-07 16:44:40 (41452): Adding VirtualBox Guest Additions to VM.
2026-02-07 16:44:40 (41452): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-07 16:44:40 (41452): forwarding host port 56398 to guest port 80
2026-02-07 16:44:40 (41452): Enabling remote desktop for VM.
2026-02-07 16:44:41 (41452): Enabling shared directory for VM.
2026-02-07 16:44:42 (41452): Starting VM using VBoxManage interface. (boinc_d5c120c32e0d409a, slot#2)
2026-02-07 16:44:47 (41452): Successfully started VM. (PID = '46252')
2026-02-07 16:44:47 (41452): Reporting VM Process ID to BOINC.
2026-02-07 16:44:47 (41452): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-07 16:44:47 (41452): Guest Log: CPUID EDX: 0x178bfbff
2026-02-07 16:44:47 (41452): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-07 16:44:47 (41452): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-07 16:44:47 (41452): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-07 16:44:47 (41452): Detected: Web Application Enabled (http://localhost:56398)
2026-02-07 16:44:47 (41452): Detected: Remote Desktop Enabled (localhost:56400)
2026-02-07 16:44:47 (41452): Preference change detected
2026-02-07 16:44:47 (41452): Setting CPU throttle for VM. (100%)
2026-02-07 16:44:47 (41452): Setting network throttle for VM. (1024KB)
2026-02-07 16:44:48 (41452): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-07 16:44:49 (41452): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-07 16:44:49 (41452): Guest Log: BIOS: Booting from Hard Disk...
2026-02-07 16:44:52 (41452): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-07 16:44:52 (41452): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-07 16:44:52 (41452): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-07 16:44:56 (41452): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-07 16:44:56 (41452): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-07 16:45:03 (41452): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000177 main     Log opened 2026-02-07T16:45:00.644114000Z
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000302 main     OS Product: Linux
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000428 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000471 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000507 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000508 main     Process ID: 1380
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.000509 main     Package type: LINUX_64BITS_GENERIC
2026-02-07 16:45:03 (41452): Guest Log: 00:00:00.001817 main     5.2.32 r132073 started. Verbose level = 0
2026-02-07 16:45:03 (41452): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-07 16:45:03 (41452): Guest Log: [INFO] Mounting shared directory
2026-02-07 16:45:03 (41452): Guest Log: [INFO] Checking for init_data.xml
2026-02-07 16:45:12 (41452): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-07 16:45:12 (41452): Guest Log: [INFO] Detected branch: prod
2026-02-07 16:45:12 (41452): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-07 16:45:12 (41452): Guest Log: Copying input files
2026-02-07 16:45:13 (41452): Guest Log: 00:00:10.004191 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 129 750 000ns (GuestNow=1 770 500 712 776 916 000 ns GuestLast=1 770 482 700 647 166 000 ns fSetTimeLastLoop=true )
2026-02-07 16:45:15 (41452): Guest Log: Copied input files into RunAtlas.
2026-02-07 16:45:15 (41452): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2026-02-07 16:45:56 (41452): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-07 16:45:56 (41452): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-07 16:45:56 (41452): Guest Log: 2.6.3.0 1680 0 31636 155996 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2026-02-07 16:45:57 (41452): Guest Log: copied the webapp to /var/www
2026-02-07 16:45:57 (41452): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-07 16:45:57 (41452): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-07 16:45:57 (41452): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-07 16:45:57 (41452): Guest Log:  *** Starting ATLAS job. (PandaID=6998615599 taskID=48318010) ***
2026-02-07 17:59:45 (41452): Guest Log:  *** Job finished ***
2026-02-07 17:59:45 (41452): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:40,154 | INFO     | PID=6117 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:40,154 | INFO     | found 0 job(s) in 20 queues
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:40,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:40,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:40,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:40,155 | INFO     | [monitor] control thread has ended
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,880 | INFO     | all workflow threads have been joined
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,880 | INFO     | end of generic workflow (traces error code: 0)
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,880 | INFO     | traces error code: 0
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,971 [wrapper] ==== pilot stdout END ====
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,977 [wrapper] ==== wrapper stdout RESUME ====
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,984 [wrapper] pilotpid: 6117
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:42,991 [wrapper] Pilot exit status: 0
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:43,024 [wrapper] pandaids: 6998615599
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:43,066 [wrapper] cleanup supervisor_pilot 25327 6118
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:43,074 [wrapper] Test setup, not cleaning
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:43,083 [wrapper] apfmon messages muted
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:43,090 [wrapper] ==== wrapper stdout END ====
2026-02-07 17:59:45 (41452): Guest Log: 2026-02-07 22:59:43,098 [wrapper] ==== wrapper stderr END ====
2026-02-07 17:59:45 (41452): Guest Log:  *** Error codes and diagnostics ***
2026-02-07 17:59:45 (41452): Guest Log:     "exeErrorCode": 0,
2026-02-07 17:59:45 (41452): Guest Log:     "exeErrorDiag": "",
2026-02-07 17:59:45 (41452): Guest Log:     "pilotErrorCode": 0,
2026-02-07 17:59:45 (41452): Guest Log:     "pilotErrorDiag": "",
2026-02-07 17:59:45 (41452): Guest Log:  *** Listing of results directory ***
2026-02-07 17:59:45 (41452): Guest Log: total 182708
2026-02-07 17:59:45 (41452): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 22:50 queuedata.json
2026-02-07 17:59:45 (41452): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 22:50 pilot3.tar.gz
2026-02-07 17:59:45 (41452): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 22:51 runpilot2-wrapper.sh
2026-02-07 17:59:45 (41452): Guest Log: -rwxr-xr-x. 1 atlas atlas    597950 Feb  7 21:45 input.tar.gz
2026-02-07 17:59:45 (41452): Guest Log: -rwxr-xr-x. 1 atlas atlas      9297 Feb  7 21:45 init_data.xml
2026-02-07 17:59:45 (41452): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  7 21:45 start_atlas.sh
2026-02-07 17:59:45 (41452): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  7 21:45 EVNT.48318008._000193.pool.root.1 -> /data/./ATLAS.root_0
2026-02-07 17:59:45 (41452): Guest Log: -rw-r--r--. 1 atlas atlas      2526 Feb  7 21:45 pandaJob.out
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas        48 Feb  7 21:46 setup.sh.local
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas   1009510 Feb  7 21:46 agis_schedconf.cvmfs.json
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  7 21:46 agis_ddmendpoints.agis.ALL.json
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas       425 Feb  7 21:46 workernode_map.json
2026-02-07 17:59:45 (41452): Guest Log: drwx------. 5 atlas atlas      4096 Feb  7 21:46 pilot3
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas 181267173 Feb  7 22:58 HITS.48318010._010686.pool.root.1
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas      1038 Feb  7 22:58 memory_monitor_summary.json
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas    346273 Feb  7 22:59 log.48318010._010686.job.log.tgz.1
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas      6338 Feb  7 22:59 heartbeat.json
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas        95 Feb  7 22:59 pilot_heartbeat.json
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas      4916 Feb  7 22:59 pilotlog.txt
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas    626739 Feb  7 22:59 log.48318010._010686.job.log.1
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas       357 Feb  7 22:59 output.list
2026-02-07 17:59:45 (41452): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  7 22:59 runtime_log
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas    993280 Feb  7 22:59 result.tar.gz
2026-02-07 17:59:45 (41452): Guest Log: -rw-r--r--. 1 atlas atlas      9220 Feb  7 22:59 runtime_log.err
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas       655 Feb  7 22:59 N94KDmyqj88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmN1ZKDmhmNrcm.diag
2026-02-07 17:59:45 (41452): Guest Log: Looking for outputfile HITS.48318010._010686.pool.root.1
2026-02-07 17:59:45 (41452): Guest Log: HITS file was successfully produced
2026-02-07 17:59:45 (41452): Guest Log: -rw-------. 1 atlas atlas 181267173 Feb  7 22:58 /home/atlas/RunAtlas/HITS.48318010._010686.pool.root.1
2026-02-07 17:59:46 (41452): Guest Log: Successfully finished the ATLAS job!
2026-02-07 17:59:46 (41452): Guest Log: Copying the results back to the shared directory!
2026-02-07 17:59:46 (41452): Guest Log:  *** Contents of shared directory: ***
2026-02-07 17:59:46 (41452): Guest Log: total 670132
2026-02-07 17:59:46 (41452): Guest Log: -rwxrwxrwx. 1 root root 503322288 Feb  7 21:44 ATLAS.root_0
2026-02-07 17:59:46 (41452): Guest Log: -rwxrwxrwx. 1 root root 181267173 Feb  7  2026 HITS.pool.root.1
2026-02-07 17:59:46 (41452): Guest Log: -rwxrwxrwx. 1 root root      9297 Feb  7 21:44 init_data.xml
2026-02-07 17:59:46 (41452): Guest Log: -rwxrwxrwx. 1 root root    597950 Feb  7 04:09 input.tar.gz
2026-02-07 17:59:46 (41452): Guest Log: -rwxrwxrwx. 1 root root    993280 Feb  7  2026 result.tar.gz
2026-02-07 17:59:46 (41452): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  7 04:09 start_atlas.sh
2026-02-07 17:59:46 (41452): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-07 17:59:46 (41452): VM Completion File Detected.
2026-02-07 17:59:46 (41452): Powering off VM.
2026-02-07 17:59:47 (41452): Successfully stopped VM.
2026-02-07 17:59:47 (41452): Deregistering VM. (boinc_d5c120c32e0d409a, slot#2)
2026-02-07 17:59:47 (41452): Removing network bandwidth throttle group from VM.
2026-02-07 17:59:48 (41452): Removing VM from VirtualBox.
2026-02-07 17:59:53 (41452): called boinc_finish(0)

</stderr_txt>
]]>

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