Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:09:51 (4057826): wrapper (7.7.26015): starting
16:09:51 (4057826): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 16:09:51] Arguments: --nthreads 4
[2026-02-07 16:09:51] Threads: 4
[2026-02-07 16:09:51] Checking for CVMFS
[2026-02-07 16:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 16:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 16:09:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 16:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 16:09:52] 2.9.2.0 3731233 1906 92232 155987 2 49 24537616 36864000 0 130560 0 918272 99.985 74121 15368 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 16:09:52] CVMFS is ok
[2026-02-07 16:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 16:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 16:09:52] Further information can be found at the LHC@home message board.
[2026-02-07 16:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 16:09:52] Checking for apptainer binary...
[2026-02-07 16:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 16:09:52] Running /usr/bin/apptainer --version
[2026-02-07 16:09:52] apptainer version 1.4.1-1.1
[2026-02-07 16:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 16:09:52] thA332a
[2026-02-07 16:09:52] apptainer works
[2026-02-07 16:09:52] Set ATHENA_PROC_NUMBER=4
[2026-02-07 16:09:52] Set ATHENA_CORE_NUMBER=4
[2026-02-07 16:09:52] Starting ATLAS job with PandaID=7004731085
[2026-02-07 16:09:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 17:52:35]  *** The last 200 lines of the pilot log: ***
[2026-02-07 17:52:35] 
[2026-02-07 17:52:35] 2026-02-07 16:52:05,044 | INFO     | **************************************
[2026-02-07 17:52:35] 2026-02-07 16:52:05,547 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-07 17:52:35] 2026-02-07 16:52:05,565 | INFO     | sufficient remaining disk space (331029151744 B)
[2026-02-07 17:52:35] 2026-02-07 16:52:05,565 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 17:52:35] 2026-02-07 16:52:05,565 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 17:52:35] 2026-02-07 16:52:05,565 | INFO     | update_server=False
[2026-02-07 17:52:35] 2026-02-07 16:52:05,565 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 17:52:35] 2026-02-07 16:52:05,702 | INFO     | all payload control threads have been joined
[2026-02-07 17:52:35] 2026-02-07 16:52:05,713 | INFO     | all data control threads have been joined
[2026-02-07 17:52:35] 2026-02-07 16:52:05,871 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 17:52:35] 2026-02-07 16:52:05,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 17:52:35] 2026-02-07 16:52:05,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:52:35] 2026-02-07 16:52:05,872 | INFO     | will abort loop
[2026-02-07 17:52:35] 2026-02-07 16:52:06,571 | INFO     | [job] retrieve thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,588 | INFO     | [payload] failed_post thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,598 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,681 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,708 | INFO     | [payload] control thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,719 | INFO     | [data] control thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,839 | INFO     | [data] copytool_in thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:06,877 | INFO     | [job] job monitor thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:07,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 17:52:35] 2026-02-07 16:52:07,045 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:07,120 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:07,210 | INFO     | all job control threads have been joined
[2026-02-07 17:52:35] 2026-02-07 16:52:07,573 | INFO     | [payload] validate_post thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:07,978 | INFO     | [job] validate thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:08,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 17:52:35] 2026-02-07 16:52:08,216 | INFO     | [job] control thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:08,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:52:35] 2026-02-07 16:52:09,008 | INFO     | [data] copytool_out thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:09,570 | INFO     | [job] queue monitor thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:12,149 | INFO     | [monitor] cgroup control has ended
[2026-02-07 17:52:35] 2026-02-07 16:52:12,196 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 17:52:35] 2026-02-07 16:52:14,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148044875584)>', '<ExcThread(monitor, started 140147081320192)>']
[2026-02-07 17:52:35] 2026-02-07 16:52:19,155 | INFO     | all workflow threads have been joined
[2026-02-07 17:52:35] 2026-02-07 16:52:19,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 17:52:35] 2026-02-07 16:52:19,155 | INFO     | traces error code: 0
[2026-02-07 17:52:35] 2026-02-07 16:52:19,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 17:52:35] 2026-02-07 16:52:35,309 | INFO     | PID=4061942 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 17:52:35] 2026-02-07 16:52:35,310 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 17:52:35] 2026-02-07 16:52:35,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 17:52:35] 2026-02-07 16:52:35,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 17:52:35] 2026-02-07 16:52:35,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 17:52:35] 2026-02-07 16:52:35,310 | INFO     | [monitor] control thread has ended
[2026-02-07 17:52:35] 2026-02-07 16:52:35,386 [wrapper] ==== pilot stdout END ====
[2026-02-07 17:52:35] 2026-02-07 16:52:35,391 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 17:52:35] 2026-02-07 16:52:35,395 [wrapper] pilotpid: 4061942
[2026-02-07 17:52:35] 2026-02-07 16:52:35,399 [wrapper] Pilot exit status: 0
[2026-02-07 17:52:35] 2026-02-07 16:52:35,411 [wrapper] pandaids: 7004731085
[2026-02-07 17:52:35] 2026-02-07 16:52:35,433 [wrapper] cleanup supervisor_pilot 4071829 4061943
[2026-02-07 17:52:35] 2026-02-07 16:52:35,437 [wrapper] Test setup, not cleaning
[2026-02-07 17:52:35] 2026-02-07 16:52:35,441 [wrapper] apfmon messages muted
[2026-02-07 17:52:35] 2026-02-07 16:52:35,445 [wrapper] ==== wrapper stdout END ====
[2026-02-07 17:52:35] 2026-02-07 16:52:35,449 [wrapper] ==== wrapper stderr END ====
[2026-02-07 17:52:35]  *** Error codes and diagnostics ***
[2026-02-07 17:52:35]     "exeErrorCode": 0,
[2026-02-07 17:52:35]     "exeErrorDiag": "",
[2026-02-07 17:52:35]     "pilotErrorCode": 0,
[2026-02-07 17:52:35]     "pilotErrorDiag": "",
[2026-02-07 17:52:35]  *** Listing of results directory ***
[2026-02-07 17:52:35] total 945096
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc    584627 Feb  6 21:57 pilot3.tar.gz
[2026-02-07 17:52:35] -rwx------ 1 boinc boinc     36322 Feb  6 21:59 runpilot2-wrapper.sh
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc      5111 Feb  6 22:00 queuedata.json
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc       100 Feb  7 16:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 17:52:35] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 16:09 run_atlas
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc       105 Feb  7 16:09 job.xml
[2026-02-07 17:52:35] -rw-r--r-- 2 boinc boinc 685758958 Feb  7 16:09 EVNT.48431094._000289.pool.root.1
[2026-02-07 17:52:35] -rw-r--r-- 2 boinc boinc    597953 Feb  7 16:09 input.tar.gz
[2026-02-07 17:52:35] -rw-r--r-- 2 boinc boinc     15845 Feb  7 16:09 start_atlas.sh
[2026-02-07 17:52:35] drwxrwx--x 2 boinc boinc      4096 Feb  7 16:09 shared
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc         0 Feb  7 16:09 boinc_setup_complete
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc      6370 Feb  7 16:09 init_data.xml
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc         0 Feb  7 16:09 boinc_lockfile
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc      2553 Feb  7 16:09 pandaJob.out
[2026-02-07 17:52:35] -rw------- 1 boinc boinc   1009502 Feb  7 16:10 agis_schedconf.cvmfs.json
[2026-02-07 17:52:35] -rw------- 1 boinc boinc   1513088 Feb  7 16:10 agis_ddmendpoints.agis.ALL.json
[2026-02-07 17:52:35] -rw------- 1 boinc boinc       428 Feb  7 16:10 workernode_map.json
[2026-02-07 17:52:35] drwx------ 5 boinc boinc      4096 Feb  7 16:10 pilot3
[2026-02-07 17:52:35] -rw------- 1 boinc boinc 275751598 Feb  7 17:51 HITS.48431096._007006.pool.root.1
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc       530 Feb  7 17:51 boinc_task_state.xml
[2026-02-07 17:52:35] -rw------- 1 boinc boinc      1018 Feb  7 17:51 memory_monitor_summary.json
[2026-02-07 17:52:35] -rw------- 1 boinc boinc    285222 Feb  7 17:51 log.48431096._007006.job.log.tgz.1
[2026-02-07 17:52:35] -rw------- 1 boinc boinc      6309 Feb  7 17:52 heartbeat.json
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc        27 Feb  7 17:52 wrapper_checkpoint.txt
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc      8192 Feb  7 17:52 boinc_mmap_file
[2026-02-07 17:52:35] -rw------- 1 boinc boinc       747 Feb  7 17:52 pilotlog.txt
[2026-02-07 17:52:35] -rw------- 1 boinc boinc        95 Feb  7 17:52 pilot_heartbeat.json
[2026-02-07 17:52:35] -rw------- 1 boinc boinc    887557 Feb  7 17:52 log.48431096._007006.job.log.1
[2026-02-07 17:52:35] -rw------- 1 boinc boinc       357 Feb  7 17:52 output.list
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc       620 Feb  7 17:52 runtime_log
[2026-02-07 17:52:35] -rw------- 1 boinc boinc   1187840 Feb  7 17:52 result.tar.gz
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc      8901 Feb  7 17:52 runtime_log.err
[2026-02-07 17:52:35] -rw------- 1 boinc boinc       658 Feb  7 17:52 26xMDmp6h88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmFrZKDmBt3gLo.diag
[2026-02-07 17:52:35] -rw-r--r-- 1 boinc boinc      8214 Feb  7 17:52 stderr.txt
[2026-02-07 17:52:35] HITS file was successfully produced:
[2026-02-07 17:52:35] -rw------- 1 boinc boinc 275751598 Feb  7 17:51 shared/HITS.pool.root.1
[2026-02-07 17:52:35]  *** Contents of shared directory: ***
[2026-02-07 17:52:35] total 940748
[2026-02-07 17:52:35] -rw-r--r-- 2 boinc boinc 685758958 Feb  7 16:09 ATLAS.root_0
[2026-02-07 17:52:35] -rw-r--r-- 2 boinc boinc    597953 Feb  7 16:09 input.tar.gz
[2026-02-07 17:52:35] -rw-r--r-- 2 boinc boinc     15845 Feb  7 16:09 start_atlas.sh
[2026-02-07 17:52:35] -rw------- 1 boinc boinc 275751598 Feb  7 17:51 HITS.pool.root.1
[2026-02-07 17:52:35] -rw------- 1 boinc boinc   1187840 Feb  7 17:52 result.tar.gz
17:52:56 (4057826): run_atlas exited; CPU time 23271.892934
17:52:56 (4057826): called boinc_finish(0)

</stderr_txt>
]]>

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