Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:44 (22726): wrapper (7.7.26015): starting
13:12:44 (22726): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 13:12:44] Arguments: --nthreads 8
[2026-02-07 13:12:44] Threads: 8
[2026-02-07 13:12:44] Checking for CVMFS
[2026-02-07 13:12:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 13:12:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 13:12:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 13:12:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 13:12:50] 2.11.2.0 23466 77142 132640 155983 1 53 22582829 25165825 2512 130560 0 25620179 99.794 20870379 2318 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-07 13:12:50] CVMFS is ok
[2026-02-07 13:12:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 13:12:50] Checking for apptainer binary...
[2026-02-07 13:12:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 13:12:50] Running /usr/bin/apptainer --version
[2026-02-07 13:12:50] apptainer version 1.3.2-1.el7
[2026-02-07 13:12:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 13:12:57] cg-vwn389.simple-grid.lan
[2026-02-07 13:12:57] apptainer works
[2026-02-07 13:12:57] Set ATHENA_PROC_NUMBER=8
[2026-02-07 13:12:57] Set ATHENA_CORE_NUMBER=8
[2026-02-07 13:12:58] Starting ATLAS job with PandaID=6991964998
[2026-02-07 13:12:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 17:07:44]  *** The last 200 lines of the pilot log: ***
[2026-02-07 17:07:44] 2026-02-07 16:06:43,712 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/17/workernode_map.json
[2026-02-07 17:07:44] 2026-02-07 16:06:43,712 | INFO     | this job has now completed (state=finished)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,713 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,713 | INFO     | log transfer has been attempted: DONE
[2026-02-07 17:07:44] 2026-02-07 16:06:43,713 | INFO     | job 6991964998 has finished - writing final server update
[2026-02-07 17:07:44] 2026-02-07 16:06:43,713 | INFO     | total number of processed events: 400 (read)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,715 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6991964998/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,716 | INFO     | extracted standard info from prmon json
[2026-02-07 17:07:44] 2026-02-07 16:06:43,716 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 17:07:44] 2026-02-07 16:06:43,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 17:07:44] 2026-02-07 16:06:43,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 17:07:44] 2026-02-07 16:06:43,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 17:07:44] 2026-02-07 16:06:43,721 | INFO     | fitting pss+swap vs Time
[2026-02-07 17:07:44] 2026-02-07 16:06:43,721 | INFO     | sum of square deviations: 3346927870.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,723 | INFO     | sum of deviations: 2654666259.0000153
[2026-02-07 17:07:44] 2026-02-07 16:06:43,723 | INFO     | mean x: 1770473656.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,723 | INFO     | mean y: 2494436.438914027
[2026-02-07 17:07:44] 2026-02-07 16:06:43,723 | INFO     | intersect: -1401783414.649523
[2026-02-07 17:07:44] 2026-02-07 16:06:43,724 | INFO     | chi2: 4.508207013593153
[2026-02-07 17:07:44] 2026-02-07 16:06:43,724 | INFO     | sum of square deviations: 3124858590.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,726 | INFO     | sum of deviations: 17282658165.000008
[2026-02-07 17:07:44] 2026-02-07 16:06:43,726 | INFO     | mean x: 1770473503.5
[2026-02-07 17:07:44] 2026-02-07 16:06:43,726 | INFO     | mean y: 2504297.592592593
[2026-02-07 17:07:44] 2026-02-07 16:06:43,726 | INFO     | intersect: -9789455072.697006
[2026-02-07 17:07:44] 2026-02-07 16:06:43,727 | INFO     | chi2: 3.771972033324349
[2026-02-07 17:07:44] 2026-02-07 16:06:43,727 | INFO     | current chi2=3.771972033324349 (change=16.33099318751129 %)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,727 | INFO     | right removable region: 215
[2026-02-07 17:07:44] 2026-02-07 16:06:43,727 | INFO     | sum of square deviations: 3124858590.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,734 | INFO     | sum of deviations: -62400609196.5
[2026-02-07 17:07:44] 2026-02-07 16:06:43,735 | INFO     | mean x: 1770473808.5
[2026-02-07 17:07:44] 2026-02-07 16:06:43,735 | INFO     | mean y: 2538995.060185185
[2026-02-07 17:07:44] 2026-02-07 16:06:43,735 | INFO     | intersect: 35357304990.038376
[2026-02-07 17:07:44] 2026-02-07 16:06:43,735 | INFO     | chi2: 1.1256913344406823
[2026-02-07 17:07:44] 2026-02-07 16:06:43,735 | INFO     | current chi2=1.1256913344406823 (change=75.03017649707532 %)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,736 | INFO     | sum of square deviations: 2912836010.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,737 | INFO     | sum of deviations: -69962023559.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,737 | INFO     | mean x: 1770473961.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,738 | INFO     | mean y: 2544362.4976303317
[2026-02-07 17:07:44] 2026-02-07 16:06:43,738 | INFO     | intersect: 42526716868.205574
[2026-02-07 17:07:44] 2026-02-07 16:06:43,738 | INFO     | chi2: 0.999238448789469
[2026-02-07 17:07:44] 2026-02-07 16:06:43,738 | INFO     | current chi2=0.999238448789469 (change=11.233353387591228 %)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,738 | INFO     | left removable region: 20
[2026-02-07 17:07:44] 2026-02-07 16:06:43,739 | INFO     | sum of square deviations: 2299168690.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,740 | INFO     | sum of deviations: -43017661770.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,740 | INFO     | mean x: 1770474083.0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,740 | INFO     | mean y: 2547013.7230769233
[2026-02-07 17:07:44] 2026-02-07 16:06:43,740 | INFO     | intersect: 33128283114.03719
[2026-02-07 17:07:44] 2026-02-07 16:06:43,741 | INFO     | chi2: 0.20067542401653948
[2026-02-07 17:07:44] 2026-02-07 16:06:43,741 | INFO     | current memory leak: -18.71 B/s (using 195 data points, chi2=0.20)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,741 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,742 | INFO     | ..............................
[2026-02-07 17:07:44] 2026-02-07 16:06:43,747 | INFO     | . Timing measurements:
[2026-02-07 17:07:44] 2026-02-07 16:06:43,747 | INFO     | . get job = 0 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,747 | INFO     | . initial setup = 98 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,747 | INFO     | . payload setup = 123 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,747 | INFO     | . stage-in = 0 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,747 | INFO     | . payload execution = 13564 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,748 | INFO     | . stage-out = 3 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,748 | INFO     | . log creation = 1 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,748 | INFO     | ..............................
[2026-02-07 17:07:44] 2026-02-07 16:06:43,886 | INFO     | 
[2026-02-07 17:07:44] 2026-02-07 16:06:43,886 | INFO     | job summary report
[2026-02-07 17:07:44] 2026-02-07 16:06:43,886 | INFO     | --------------------------------------------------
[2026-02-07 17:07:44] 2026-02-07 16:06:43,886 | INFO     | PanDA job id: 6991964998
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | task id: 48310749
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | errors: (none)
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | pilot state: finished 
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | transexitcode: 0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | exeerrorcode: 0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | exeerrordiag: 
[2026-02-07 17:07:44] 2026-02-07 16:06:43,887 | INFO     | exitcode: 0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | exitmsg: OK
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | cpuconsumptiontime: 53082 s
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | nevents: 400
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | neventsw: 0
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | pid: 31596
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | pgrp: 31596
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | corecount: 8
[2026-02-07 17:07:44] 2026-02-07 16:06:43,888 | INFO     | event service: False
[2026-02-07 17:07:44] 2026-02-07 16:06:43,889 | INFO     | sizes: {0: 2282549, 1: 2283006, 2: 2283066, 12: 2283094, 13692: 2313248, 13693: 2313247, 13698: 2322431, 13699: 2322487, 13700: 2322681}
[2026-02-07 17:07:44] 2026-02-07 16:06:43,889 | INFO     | --------------------------------------------------
[2026-02-07 17:07:44] 2026-02-07 16:06:43,889 | INFO     | 
[2026-02-07 17:07:44] 2026-02-07 16:06:43,889 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-02-07 17:07:44] 2026-02-07 16:06:44,170 | INFO     | time since job start (13713s) is within the limit (349056.0s)
[2026-02-07 17:07:44] 2026-02-07 16:06:44,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,311 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 17:07:44] 2026-02-07 16:06:44,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,311 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 17:07:44] 2026-02-07 16:06:44,311 | INFO     | job 6991964998 has completed (purged errors)
[2026-02-07 17:07:44] 2026-02-07 16:06:44,311 | INFO     | overall cleanup function is called
[2026-02-07 17:07:44] 2026-02-07 16:06:45,320 | INFO     | --- collectZombieJob: --- 10, [31596]
[2026-02-07 17:07:44] 2026-02-07 16:06:45,320 | INFO     | zombie collector waiting for pid 31596
[2026-02-07 17:07:44] 2026-02-07 16:06:45,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 17:07:44] 2026-02-07 16:06:45,320 | INFO     | collected zombie processes
[2026-02-07 17:07:44] 2026-02-07 16:06:45,321 | INFO     | will attempt to kill all subprocesses of pid=31596
[2026-02-07 17:07:44] 2026-02-07 16:06:45,368 | INFO     | PID=26975 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 17:07:44] 2026-02-07 16:06:45,368 | INFO     | .. there are 9 such processes running
[2026-02-07 17:07:44] 2026-02-07 16:06:45,475 | INFO     | process IDs to be killed: [31596] (in reverse order)
[2026-02-07 17:07:44] 2026-02-07 16:06:45,907 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 17:07:44] 2026-02-07 16:06:45,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 17:07:44] 2026-02-07 16:06:45,910 | INFO     | did not find any defunct processes belonging to 31596
[2026-02-07 17:07:44] 2026-02-07 16:06:45,914 | INFO     | did not find any defunct processes belonging to 31596
[2026-02-07 17:07:44] 2026-02-07 16:06:45,914 | INFO     | ready for new job
[2026-02-07 17:07:44] 2026-02-07 16:06:45,914 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 17:07:44] 2026-02-07 16:06:45,916 | INFO     | **************************************
[2026-02-07 17:07:44] 2026-02-07 16:06:45,916 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-07 17:07:44] 2026-02-07 16:06:45,916 | INFO     | **************************************
[2026-02-07 17:07:44] 2026-02-07 16:06:45,917 | INFO     | 
[2026-02-07 17:07:44] 2026-02-07 16:06:45,917 | INFO     | pilot is running in a VM
[2026-02-07 17:07:44] 2026-02-07 16:06:45,917 | INFO     | architecture information:
[2026-02-07 17:07:44] 2026-02-07 16:06:45,925 | INFO     | executing command: cat /etc/os-release
[2026-02-07 17:07:44] 2026-02-07 16:06:46,215 | INFO     | cat /etc/os-release:
[2026-02-07 17:07:44] NAME="CentOS Linux"
[2026-02-07 17:07:44] VERSION="7 (Core)"
[2026-02-07 17:07:44] ID="centos"
[2026-02-07 17:07:44] ID_LIKE="rhel fedora"
[2026-02-07 17:07:44] VERSION_ID="7"
[2026-02-07 17:07:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 17:07:44] ANSI_COLOR="0;31"
[2026-02-07 17:07:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 17:07:44] HOME_URL="https://www.centos.org/"
[2026-02-07 17:07:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 17:07:44] 
[2026-02-07 17:07:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 17:07:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 17:07:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 17:07:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 17:07:44] 
[2026-02-07 17:07:44] 2026-02-07 16:06:46,216 | INFO     | **************************************
[2026-02-07 17:07:44] 2026-02-07 16:06:46,719 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-02-07 17:07:44] 2026-02-07 16:06:46,922 | INFO     | sufficient remaining disk space (487823769600 B)
[2026-02-07 17:07:44] 2026-02-07 16:06:46,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 17:07:44] 2026-02-07 16:06:46,922 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 17:07:44] 2026-02-07 16:06:46,922 | INFO     | update_server=False
[2026-02-07 17:07:44] 2026-02-07 16:06:46,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 17:07:44] 2026-02-07 16:06:46,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 17:07:44] 2026-02-07 16:06:47,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:07:44] 2026-02-07 16:06:47,085 | INFO     | aborting loop
[2026-02-07 17:07:44] 2026-02-07 16:06:47,143 | INFO     | all data control threads have been joined
[2026-02-07 17:07:44] 2026-02-07 16:06:47,364 | INFO     | all job control threads have been joined
[2026-02-07 17:07:44] 2026-02-07 16:06:47,928 | INFO     | [job] retrieve thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,091 | INFO     | [job] job monitor thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,111 | INFO     | all payload control threads have been joined
[2026-02-07 17:07:44] 2026-02-07 16:06:48,149 | INFO     | [data] control thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 17:07:44] 2026-02-07 16:06:48,369 | INFO     | [job] control thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,680 | INFO     | [payload] validate_post thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,868 | INFO     | [job] validate thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,898 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 17:07:44] 2026-02-07 16:06:48,929 | INFO     | [data] copytool_out thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,937 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:48,943 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:49,000 | INFO     | [data] copytool_in thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:49,117 | INFO     | [payload] control thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:49,210 | INFO     | [payload] failed_post thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:49,909 | INFO     | [job] queue monitor thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:52,216 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:06:57,632 | INFO     | job.realtimelogging is not enabled
[2026-02-07 17:07:44] 2026-02-07 16:06:58,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 17:07:44] 2026-02-07 16:07:17,579 | INFO     | PID=26975 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 17:07:44] 2026-02-07 16:07:17,580 | INFO     | .. there are 9 such processes running
[2026-02-07 17:07:44] 2026-02-07 16:07:17,581 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 17:07:44] 2026-02-07 16:07:17,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 17:07:44] 2026-02-07 16:07:17,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 17:07:44] 2026-02-07 16:07:34,192 | INFO     | [monitor] cgroup control has ended
[2026-02-07 17:07:44] 2026-02-07 16:07:34,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354273146688)>', '<ExcThread(monitor, started 140353617258240)>']
[2026-02-07 17:07:44] 2026-02-07 16:07:35,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 17:07:44] 2026-02-07 16:07:35,689 | INFO     | [monitor] control thread has ended
[2026-02-07 17:07:44] 2026-02-07 16:07:39,939 | INFO     | all workflow threads have been joined
[2026-02-07 17:07:44] 2026-02-07 16:07:39,939 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 17:07:44] 2026-02-07 16:07:39,939 | INFO     | traces error code: 0
[2026-02-07 17:07:44] 2026-02-07 16:07:39,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 17:07:44] 2026-02-07 16:07:40,272 [wrapper] ==== pilot stdout END ====
[2026-02-07 17:07:44] 2026-02-07 16:07:40,335 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 17:07:44] 2026-02-07 16:07:40,437 [wrapper] pilotpid: 26975
[2026-02-07 17:07:44] 2026-02-07 16:07:40,485 [wrapper] Pilot exit status: 0
[2026-02-07 17:07:44] 2026-02-07 16:07:40,826 [wrapper] pandaids: 6991964998
[2026-02-07 17:07:44] 2026-02-07 16:07:41,589 [wrapper] cleanup supervisor_pilot  6826 26976
[2026-02-07 17:07:44] 2026-02-07 16:07:41,635 [wrapper] Test setup, not cleaning
[2026-02-07 17:07:44] 2026-02-07 16:07:41,676 [wrapper] apfmon messages muted
[2026-02-07 17:07:44] 2026-02-07 16:07:41,717 [wrapper] ==== wrapper stdout END ====
[2026-02-07 17:07:44] 2026-02-07 16:07:41,758 [wrapper] ==== wrapper stderr END ====
[2026-02-07 17:07:44]  *** Error codes and diagnostics ***
[2026-02-07 17:07:44]     "exeErrorCode": 0,
[2026-02-07 17:07:44]     "exeErrorDiag": "",
[2026-02-07 17:07:44]     "pilotErrorCode": 0,
[2026-02-07 17:07:44]     "pilotErrorDiag": "",
[2026-02-07 17:07:44]  *** Listing of results directory ***
[2026-02-07 17:07:44] total 671216
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc    584422 Feb  1 13:55 pilot3.tar.gz
[2026-02-07 17:07:44] -rwx------. 1 boinc boinc     36322 Feb  1 13:56 runpilot2-wrapper.sh
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc      5111 Feb  1 13:57 queuedata.json
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc       100 Feb  7 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 17:07:44] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 13:12 run_atlas
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc       105 Feb  7 13:12 job.xml
[2026-02-07 17:07:44] -rw-r--r--. 2 boinc boinc 495643576 Feb  7 13:12 EVNT.48310747._000055.pool.root.1
[2026-02-07 17:07:44] -rw-r--r--. 2 boinc boinc    597757 Feb  7 13:12 input.tar.gz
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc      6391 Feb  7 13:12 init_data.xml
[2026-02-07 17:07:44] -rw-r--r--. 2 boinc boinc     15845 Feb  7 13:12 start_atlas.sh
[2026-02-07 17:07:44] drwxrwx--x. 2 boinc boinc        68 Feb  7 13:12 shared
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc         0 Feb  7 13:12 boinc_lockfile
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc      2522 Feb  7 13:12 pandaJob.out
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc       415 Feb  7 13:18 workernode_map.json
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc   1009494 Feb  7 13:18 agis_schedconf.cvmfs.json
[2026-02-07 17:07:44] drwx------. 5 boinc boinc      4096 Feb  7 13:18 pilot3
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc 183036175 Feb  7 17:05 HITS.48310749._002713.pool.root.1
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc       532 Feb  7 17:05 boinc_task_state.xml
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc      1013 Feb  7 17:06 memory_monitor_summary.json
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc   1513088 Feb  7 17:06 agis_ddmendpoints.agis.ALL.json
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc    452427 Feb  7 17:06 log.48310749._002713.job.log.tgz.1
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc      6322 Feb  7 17:06 heartbeat.json
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc        95 Feb  7 17:07 pilot_heartbeat.json
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc      4953 Feb  7 17:07 pilotlog.txt
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc      8192 Feb  7 17:07 boinc_mmap_file
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc        28 Feb  7 17:07 wrapper_checkpoint.txt
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc   1910644 Feb  7 17:07 log.48310749._002713.job.log.1
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc       357 Feb  7 17:07 output.list
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc       620 Feb  7 17:07 runtime_log
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc   2375680 Feb  7 17:07 result.tar.gz
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc      8832 Feb  7 17:07 runtime_log.err
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc       656 Feb  7 17:07 Co4LDmRBm68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGJQKDmxV8Uvm.diag
[2026-02-07 17:07:44] -rw-r--r--. 1 boinc boinc     20981 Feb  7 17:07 stderr.txt
[2026-02-07 17:07:44] HITS file was successfully produced:
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc 183036175 Feb  7 17:05 shared/HITS.pool.root.1
[2026-02-07 17:07:44]  *** Contents of shared directory: ***
[2026-02-07 17:07:44] total 665696
[2026-02-07 17:07:44] -rw-r--r--. 2 boinc boinc 495643576 Feb  7 13:12 ATLAS.root_0
[2026-02-07 17:07:44] -rw-r--r--. 2 boinc boinc    597757 Feb  7 13:12 input.tar.gz
[2026-02-07 17:07:44] -rw-r--r--. 2 boinc boinc     15845 Feb  7 13:12 start_atlas.sh
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc 183036175 Feb  7 17:05 HITS.pool.root.1
[2026-02-07 17:07:44] -rw-------. 1 boinc boinc   2375680 Feb  7 17:07 result.tar.gz
17:07:45 (22726): run_atlas exited; CPU time 53309.066527
17:07:45 (22726): called boinc_finish(0)

</stderr_txt>
]]>

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