Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:14:06 (5983): wrapper (7.7.26015): starting
02:14:06 (5983): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 02:14:06] Arguments: --nthreads 8
[2026-02-07 02:14:06] Threads: 8
[2026-02-07 02:14:06] Checking for CVMFS
[2026-02-07 02:14:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 02:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 02:14:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 02:14:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 02:14:06] 2.11.2.0 31396 222463 146236 155975 0 50 15163047 18432001 1833 130560 0 145917820 99.981 8271058 32443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-07 02:14:06] CVMFS is ok
[2026-02-07 02:14:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 02:14:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 02:14:06] Further information can be found at the LHC@home message board.
[2026-02-07 02:14:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 02:14:06] Checking for apptainer binary...
[2026-02-07 02:14:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 02:14:06] Running /usr/bin/apptainer --version
[2026-02-07 02:14:06] apptainer version 1.3.2-1.el7
[2026-02-07 02:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 02:14:07] c-206-10.aglt2.org
[2026-02-07 02:14:07] apptainer works
[2026-02-07 02:14:07] Set ATHENA_PROC_NUMBER=8
[2026-02-07 02:14:07] Set ATHENA_CORE_NUMBER=8
[2026-02-07 02:14:07] Starting ATLAS job with PandaID=7005044876
[2026-02-07 02:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 06:44:53]  *** The last 200 lines of the pilot log: ***
[2026-02-07 06:44:53] 2026-02-07 11:44:14,868 | INFO     | sum of deviations: 54269617764.99999
[2026-02-07 06:44:53] 2026-02-07 11:44:14,868 | INFO     | mean x: 1770456382.5
[2026-02-07 06:44:53] 2026-02-07 11:44:14,868 | INFO     | mean y: 2532249.8538461537
[2026-02-07 06:44:53] 2026-02-07 11:44:14,869 | INFO     | intersect: -17627371902.286785
[2026-02-07 06:44:53] 2026-02-07 11:44:14,869 | INFO     | chi2: 1.4020996189020472
[2026-02-07 06:44:53] 2026-02-07 11:44:14,869 | INFO     | current chi2=1.4020996189020472 (change=-0.020239552488766133 %)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,869 | INFO     | right removable region: 259
[2026-02-07 06:44:53] 2026-02-07 11:44:14,869 | INFO     | sum of square deviations: 5449944045.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,871 | INFO     | sum of deviations: 14557170204.499996
[2026-02-07 06:44:53] 2026-02-07 11:44:14,871 | INFO     | mean x: 1770456687.5
[2026-02-07 06:44:53] 2026-02-07 11:44:14,871 | INFO     | mean y: 2552438.2115384615
[2026-02-07 06:44:53] 2026-02-07 11:44:14,871 | INFO     | intersect: -4726457461.12455
[2026-02-07 06:44:53] 2026-02-07 11:44:14,872 | INFO     | chi2: 0.05751411582092433
[2026-02-07 06:44:53] 2026-02-07 11:44:14,872 | INFO     | current chi2=0.05751411582092433 (change=95.89717052589806 %)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,872 | INFO     | sum of square deviations: 5141528960.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,874 | INFO     | sum of deviations: 6282064626.000001
[2026-02-07 06:44:53] 2026-02-07 11:44:14,874 | INFO     | mean x: 1770456840.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,874 | INFO     | mean y: 2556494.9176470586
[2026-02-07 06:44:53] 2026-02-07 11:44:14,874 | INFO     | intersect: -2160637444.6578183
[2026-02-07 06:44:53] 2026-02-07 11:44:14,874 | INFO     | chi2: 0.001814514652102974
[2026-02-07 06:44:53] 2026-02-07 11:44:14,874 | INFO     | current chi2=0.001814514652102974 (change=96.84509684934976 %)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,875 | INFO     | sum of square deviations: 4844974562.5
[2026-02-07 06:44:53] 2026-02-07 11:44:14,876 | INFO     | sum of deviations: 4883922056.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,876 | INFO     | mean x: 1770456992.5
[2026-02-07 06:44:53] 2026-02-07 11:44:14,876 | INFO     | mean y: 2557214.992
[2026-02-07 06:44:53] 2026-02-07 11:44:14,877 | INFO     | intersect: -1782132021.9332094
[2026-02-07 06:44:53] 2026-02-07 11:44:14,877 | INFO     | chi2: 0.0011444539895244267
[2026-02-07 06:44:53] 2026-02-07 11:44:14,877 | INFO     | current chi2=0.0011444539895244267 (change=36.92781768402723 %)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,877 | INFO     | sum of square deviations: 4560048290.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,879 | INFO     | sum of deviations: 4028645875.000001
[2026-02-07 06:44:53] 2026-02-07 11:44:14,879 | INFO     | mean x: 1770457145.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,879 | INFO     | mean y: 2557670.1714285715
[2026-02-07 06:44:53] 2026-02-07 11:44:14,879 | INFO     | intersect: -1561580343.39082
[2026-02-07 06:44:53] 2026-02-07 11:44:14,879 | INFO     | chi2: 0.0008502569321584405
[2026-02-07 06:44:53] 2026-02-07 11:44:14,879 | INFO     | current chi2=0.0008502569321584405 (change=25.706324593113493 %)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,880 | INFO     | sum of square deviations: 4286517580.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,881 | INFO     | sum of deviations: 3827219269.4999995
[2026-02-07 06:44:53] 2026-02-07 11:44:14,881 | INFO     | mean x: 1770457297.5
[2026-02-07 06:44:53] 2026-02-07 11:44:14,881 | INFO     | mean y: 2557782.470833333
[2026-02-07 06:44:53] 2026-02-07 11:44:14,881 | INFO     | intersect: -1578195861.5673869
[2026-02-07 06:44:53] 2026-02-07 11:44:14,882 | INFO     | chi2: 0.0008493485174719442
[2026-02-07 06:44:53] 2026-02-07 11:44:14,882 | INFO     | current chi2=0.0008493485174719442 (change=0.10684002119103024 %)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,882 | INFO     | left removable region: 50
[2026-02-07 06:44:53] 2026-02-07 11:44:14,882 | INFO     | sum of square deviations: 2830787960.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,884 | INFO     | sum of deviations: 3939462167.0000005
[2026-02-07 06:44:53] 2026-02-07 11:44:14,884 | INFO     | mean x: 1770457877.0
[2026-02-07 06:44:53] 2026-02-07 11:44:14,884 | INFO     | mean y: 2556998.325358852
[2026-02-07 06:44:53] 2026-02-07 11:44:14,885 | INFO     | intersect: -2461298268.569531
[2026-02-07 06:44:53] 2026-02-07 11:44:14,885 | INFO     | chi2: 0.00025276143396789645
[2026-02-07 06:44:53] 2026-02-07 11:44:14,885 | INFO     | current memory leak: 1.39 B/s (using 209 data points, chi2=0.00)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,886 | INFO     | could have reported an average CPU frequency of 2422 MHz (12 samples)
[2026-02-07 06:44:53] 2026-02-07 11:44:14,886 | INFO     | ..............................
[2026-02-07 06:44:53] 2026-02-07 11:44:14,886 | INFO     | . Timing measurements:
[2026-02-07 06:44:53] 2026-02-07 11:44:14,886 | INFO     | . get job = 0 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | . initial setup = 6 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | . payload setup = 4 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | . stage-in = 0 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | . payload execution = 16168 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | . stage-out = 2 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | . log creation = 0 s
[2026-02-07 06:44:53] 2026-02-07 11:44:14,887 | INFO     | ..............................
[2026-02-07 06:44:53] 2026-02-07 11:44:15,385 | INFO     | 
[2026-02-07 06:44:53] 2026-02-07 11:44:15,385 | INFO     | job summary report
[2026-02-07 06:44:53] 2026-02-07 11:44:15,385 | INFO     | --------------------------------------------------
[2026-02-07 06:44:53] 2026-02-07 11:44:15,386 | INFO     | PanDA job id: 7005044876
[2026-02-07 06:44:53] 2026-02-07 11:44:15,386 | INFO     | task id: 48431096
[2026-02-07 06:44:53] 2026-02-07 11:44:15,386 | INFO     | errors: (none)
[2026-02-07 06:44:53] 2026-02-07 11:44:15,386 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 06:44:53] 2026-02-07 11:44:15,386 | INFO     | pilot state: finished 
[2026-02-07 06:44:53] 2026-02-07 11:44:15,387 | INFO     | transexitcode: 0
[2026-02-07 06:44:53] 2026-02-07 11:44:15,387 | INFO     | exeerrorcode: 0
[2026-02-07 06:44:53] 2026-02-07 11:44:15,387 | INFO     | exeerrordiag: 
[2026-02-07 06:44:53] 2026-02-07 11:44:15,387 | INFO     | exitcode: 0
[2026-02-07 06:44:53] 2026-02-07 11:44:15,387 | INFO     | exitmsg: OK
[2026-02-07 06:44:53] 2026-02-07 11:44:15,387 | INFO     | cpuconsumptiontime: 123817 s
[2026-02-07 06:44:53] 2026-02-07 11:44:15,388 | INFO     | nevents: 400
[2026-02-07 06:44:53] 2026-02-07 11:44:15,388 | INFO     | neventsw: 0
[2026-02-07 06:44:53] 2026-02-07 11:44:15,388 | INFO     | pid: 14050
[2026-02-07 06:44:53] 2026-02-07 11:44:15,388 | INFO     | pgrp: 14050
[2026-02-07 06:44:53] 2026-02-07 11:44:15,388 | INFO     | corecount: 8
[2026-02-07 06:44:53] 2026-02-07 11:44:15,389 | INFO     | event service: False
[2026-02-07 06:44:53] 2026-02-07 11:44:15,389 | INFO     | sizes: {0: 2282647, 1: 2283108, 12: 2283108, 16177: 2314604, 16180: 2323602, 16181: 2323980}
[2026-02-07 06:44:53] 2026-02-07 11:44:15,389 | INFO     | --------------------------------------------------
[2026-02-07 06:44:53] 2026-02-07 11:44:15,389 | INFO     | 
[2026-02-07 06:44:53] 2026-02-07 11:44:15,389 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-07 06:44:53] 2026-02-07 11:44:15,408 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,409 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,409 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,409 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,412 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 06:44:53] 2026-02-07 11:44:15,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,412 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 06:44:53] 2026-02-07 11:44:15,412 | INFO     | job 7005044876 has completed (purged errors)
[2026-02-07 06:44:53] 2026-02-07 11:44:15,413 | INFO     | overall cleanup function is called
[2026-02-07 06:44:53] 2026-02-07 11:44:16,174 [wrapper] supervise_pilot (15 min periods counter: 19)
[2026-02-07 06:44:53] 2026-02-07 11:44:16,421 | INFO     | --- collectZombieJob: --- 10, [14050]
[2026-02-07 06:44:53] 2026-02-07 11:44:16,421 | INFO     | zombie collector waiting for pid 14050
[2026-02-07 06:44:53] 2026-02-07 11:44:16,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 06:44:53] 2026-02-07 11:44:16,422 | INFO     | collected zombie processes
[2026-02-07 06:44:53] 2026-02-07 11:44:16,422 | INFO     | will attempt to kill all subprocesses of pid=14050
[2026-02-07 06:44:53] 2026-02-07 11:44:16,589 | INFO     | process IDs to be killed: [14050] (in reverse order)
[2026-02-07 06:44:53] 2026-02-07 11:44:16,638 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 06:44:53] 2026-02-07 11:44:16,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 06:44:53] 2026-02-07 11:44:16,641 | INFO     | did not find any defunct processes belonging to 14050
[2026-02-07 06:44:53] 2026-02-07 11:44:16,643 | INFO     | did not find any defunct processes belonging to 14050
[2026-02-07 06:44:53] 2026-02-07 11:44:16,643 | INFO     | ready for new job
[2026-02-07 06:44:53] 2026-02-07 11:44:16,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 06:44:53] 2026-02-07 11:44:16,645 | INFO     | **************************************
[2026-02-07 06:44:53] 2026-02-07 11:44:16,645 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 06:44:53] 2026-02-07 11:44:16,645 | INFO     | **************************************
[2026-02-07 06:44:53] 2026-02-07 11:44:16,645 | INFO     | 
[2026-02-07 06:44:53] 2026-02-07 11:44:16,646 | INFO     | architecture information:
[2026-02-07 06:44:53] 2026-02-07 11:44:16,646 | INFO     | executing command: cat /etc/os-release
[2026-02-07 06:44:53] 2026-02-07 11:44:16,656 | INFO     | cat /etc/os-release:
[2026-02-07 06:44:53] NAME="CentOS Linux"
[2026-02-07 06:44:53] VERSION="7 (Core)"
[2026-02-07 06:44:53] ID="centos"
[2026-02-07 06:44:53] ID_LIKE="rhel fedora"
[2026-02-07 06:44:53] VERSION_ID="7"
[2026-02-07 06:44:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 06:44:53] ANSI_COLOR="0;31"
[2026-02-07 06:44:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 06:44:53] HOME_URL="https://www.centos.org/"
[2026-02-07 06:44:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 06:44:53] 
[2026-02-07 06:44:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 06:44:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 06:44:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 06:44:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 06:44:53] 
[2026-02-07 06:44:53] 2026-02-07 11:44:16,656 | INFO     | **************************************
[2026-02-07 06:44:53] 2026-02-07 11:44:17,159 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-07 06:44:53] 2026-02-07 11:44:17,176 | INFO     | sufficient remaining disk space (25625100288 B)
[2026-02-07 06:44:53] 2026-02-07 11:44:17,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 06:44:53] 2026-02-07 11:44:17,176 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 06:44:53] 2026-02-07 11:44:17,176 | INFO     | update_server=False
[2026-02-07 06:44:53] 2026-02-07 11:44:17,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 06:44:53] 2026-02-07 11:44:17,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 06:44:53] 2026-02-07 11:44:17,415 | INFO     | job.realtimelogging is not enabled
[2026-02-07 06:44:53] 2026-02-07 11:44:17,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-07 06:44:53] 2026-02-07 11:44:17,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-07 06:44:53] 2026-02-07 11:44:17,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 06:44:53] 2026-02-07 11:44:17,575 | INFO     | will abort loop
[2026-02-07 06:44:53] 2026-02-07 11:44:18,006 | INFO     | all payload control threads have been joined
[2026-02-07 06:44:53] 2026-02-07 11:44:18,182 | INFO     | [job] retrieve thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:18,231 | INFO     | all data control threads have been joined
[2026-02-07 06:44:53] 2026-02-07 11:44:18,258 | INFO     | [payload] failed_post thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:18,421 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:18,464 | INFO     | [payload] validate_post thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:18,580 | INFO     | [job] job monitor thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:18,707 | INFO     | all job control threads have been joined
[2026-02-07 06:44:53] 2026-02-07 11:44:18,917 | INFO     | [data] copytool_in thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,012 | INFO     | [payload] control thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,183 | INFO     | [data] copytool_out thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,237 | INFO     | [data] control thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,237 | INFO     | [job] validate thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,358 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,553 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,553 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:19,714 | INFO     | [job] control thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:20,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 06:44:53] 2026-02-07 11:44:20,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 06:44:53] 2026-02-07 11:44:21,064 | INFO     | [job] queue monitor thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:24,433 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 06:44:53] 2026-02-07 11:44:47,234 | INFO     | PID=9651 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-07 06:44:53] 2026-02-07 11:44:47,234 | INFO     | .. there are 3 such processes running
[2026-02-07 06:44:53] 2026-02-07 11:44:47,235 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 06:44:53] 2026-02-07 11:44:47,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 06:44:53] 2026-02-07 11:44:47,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 06:44:53] 2026-02-07 11:44:47,368 | INFO     | [monitor] cgroup control has ended
[2026-02-07 06:44:53] 2026-02-07 11:44:48,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781111867200)>', '<ExcThread(monitor, started 139780801140480)>']
[2026-02-07 06:44:53] 2026-02-07 11:44:49,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 06:44:53] 2026-02-07 11:44:49,247 | INFO     | [monitor] control thread has ended
[2026-02-07 06:44:53] 2026-02-07 11:44:53,664 | INFO     | all workflow threads have been joined
[2026-02-07 06:44:53] 2026-02-07 11:44:53,665 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 06:44:53] 2026-02-07 11:44:53,665 | INFO     | traces error code: 0
[2026-02-07 06:44:53] 2026-02-07 11:44:53,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 06:44:53] 2026-02-07 11:44:53,784 [wrapper] ==== pilot stdout END ====
[2026-02-07 06:44:53] 2026-02-07 11:44:53,786 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 06:44:53] 2026-02-07 11:44:53,788 [wrapper] pilotpid: 9651
[2026-02-07 06:44:53] 2026-02-07 11:44:53,791 [wrapper] Pilot exit status: 0
[2026-02-07 06:44:53] 2026-02-07 11:44:53,800 [wrapper] pandaids: 7005044876
[2026-02-07 06:44:53] 2026-02-07 11:44:53,837 [wrapper] cleanup supervisor_pilot  3486 9652
[2026-02-07 06:44:53] 2026-02-07 11:44:53,839 [wrapper] Test setup, not cleaning
[2026-02-07 06:44:53] 2026-02-07 11:44:53,844 [wrapper] apfmon messages muted
[2026-02-07 06:44:53] 2026-02-07 11:44:53,847 [wrapper] ==== wrapper stdout END ====
[2026-02-07 06:44:53] 2026-02-07 11:44:53,849 [wrapper] ==== wrapper stderr END ====
[2026-02-07 06:44:53]  *** Error codes and diagnostics ***
[2026-02-07 06:44:53]     "exeErrorCode": 0,
[2026-02-07 06:44:53]     "exeErrorDiag": "",
[2026-02-07 06:44:53]     "pilotErrorCode": 0,
[2026-02-07 06:44:53]     "pilotErrorDiag": "",
[2026-02-07 06:44:53]  *** Listing of results directory ***
[2026-02-07 06:44:53] total 957868
[2026-02-07 06:44:53] -rwx------ 1 boincer umatlas     36322 Feb  6 20:46 runpilot2-wrapper.sh
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas    584627 Feb  6 20:47 pilot3.tar.gz
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas      5111 Feb  6 20:50 queuedata.json
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas       100 Feb  7 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 06:44:53] -rwxr-xr-x 1 boincer umatlas      7986 Feb  7 02:13 run_atlas
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas       105 Feb  7 02:13 job.xml
[2026-02-07 06:44:53] -rw-r--r-- 2 boincer umatlas 684629919 Feb  7 02:14 EVNT.48431094._000301.pool.root.1
[2026-02-07 06:44:53] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 02:14 start_atlas.sh
[2026-02-07 06:44:53] drwxrwx--x 2 boincer umatlas      4096 Feb  7 02:14 shared
[2026-02-07 06:44:53] -rw-r--r-- 2 boincer umatlas    597963 Feb  7 02:14 input.tar.gz
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas         0 Feb  7 02:14 boinc_lockfile
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas      2553 Feb  7 02:14 pandaJob.out
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas        57 Feb  7 02:14 setup.sh.local
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas   1009512 Feb  7 02:14 agis_schedconf.cvmfs.json
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas       445 Feb  7 02:14 workernode_map.json
[2026-02-07 06:44:53] drwx------ 5 boincer umatlas      4096 Feb  7 02:14 pilot3
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas      5952 Feb  7 06:39 init_data.xml
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas 286746630 Feb  7 06:43 HITS.48431096._007611.pool.root.1
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas       532 Feb  7 06:43 boinc_task_state.xml
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas      1056 Feb  7 06:44 memory_monitor_summary.json
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas   1513088 Feb  7 06:44 agis_ddmendpoints.agis.ALL.json
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas    496972 Feb  7 06:44 log.48431096._007611.job.log.tgz.1
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas      6425 Feb  7 06:44 heartbeat.json
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas      8192 Feb  7 06:44 boinc_mmap_file
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas        29 Feb  7 06:44 wrapper_checkpoint.txt
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas        95 Feb  7 06:44 pilot_heartbeat.json
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas      5074 Feb  7 06:44 pilotlog.txt
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas   2272010 Feb  7 06:44 log.48431096._007611.job.log.1
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas       357 Feb  7 06:44 output.list
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas       620 Feb  7 06:44 runtime_log
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas   2785280 Feb  7 06:44 result.tar.gz
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas      9342 Feb  7 06:44 runtime_log.err
[2026-02-07 06:44:53] -rw------- 1 boincer umatlas       663 Feb  7 06:44 AHcMDmfam88n9Rq4apOajLDm4fhM0noT9bVooX4SDmC1ZKDmCEOFLo.diag
[2026-02-07 06:44:53] -rw-r--r-- 1 boincer umatlas     20946 Feb  7 06:44 stderr.txt
[2026-02-07 06:44:54] HITS file was successfully produced:
[2026-02-07 06:44:54] -rw------- 1 boincer umatlas 286746630 Feb  7 06:43 shared/HITS.pool.root.1
[2026-02-07 06:44:54]  *** Contents of shared directory: ***
[2026-02-07 06:44:54] total 951940
[2026-02-07 06:44:54] -rw-r--r-- 2 boincer umatlas 684629919 Feb  7 02:14 ATLAS.root_0
[2026-02-07 06:44:54] -rw-r--r-- 2 boincer umatlas     15845 Feb  7 02:14 start_atlas.sh
[2026-02-07 06:44:54] -rw-r--r-- 2 boincer umatlas    597963 Feb  7 02:14 input.tar.gz
[2026-02-07 06:44:54] -rw------- 1 boincer umatlas 286746630 Feb  7 06:43 HITS.pool.root.1
[2026-02-07 06:44:54] -rw------- 1 boincer umatlas   2785280 Feb  7 06:44 result.tar.gz
06:44:55 (5983): run_atlas exited; CPU time 124025.051794
06:44:55 (5983): called boinc_finish(0)

</stderr_txt>
]]>

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