Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:07:44 (40017): wrapper (7.7.26015): starting
13:07:44 (40017): wrapper: running run_atlas (--nthreads 4)
[2026-02-15 13:07:44] Arguments: --nthreads 4
[2026-02-15 13:07:44] Threads: 4
[2026-02-15 13:07:44] Checking for CVMFS
[2026-02-15 13:07:44] No cvmfs_config command found, will try listing directly
[2026-02-15 13:07:44] CVMFS is ok
[2026-02-15 13:07:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-15 13:07:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-15 13:07:44] Further information can be found at the LHC@home message board.
[2026-02-15 13:07:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-15 13:07:44] Checking for apptainer binary...
[2026-02-15 13:07:44] which: no apptainer in ((null))
[2026-02-15 13:07:44] apptainer is not installed, using version from CVMFS
[2026-02-15 13:07:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-15 13:07:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-15 13:07:45] apptainer works
[2026-02-15 13:07:45] Set ATHENA_PROC_NUMBER=4
[2026-02-15 13:07:45] Set ATHENA_CORE_NUMBER=4
[2026-02-15 13:07:45] Starting ATLAS job with PandaID=7005041084
[2026-02-15 13:07:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-15 17:18:38]  *** The last 200 lines of the pilot log: ***
[2026-02-15 17:18:38] 2026-02-15 16:17:29,099 | INFO     | extracted standard info from prmon json
[2026-02-15 17:18:38] 2026-02-15 16:17:29,099 | INFO     | extracted standard memory fields from prmon json
[2026-02-15 17:18:38] 2026-02-15 16:17:29,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-15 17:18:38] 2026-02-15 16:17:29,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-15 17:18:38] 2026-02-15 16:17:29,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-15 17:18:38] 2026-02-15 16:17:29,104 | INFO     | fitting pss+swap vs Time
[2026-02-15 17:18:38] 2026-02-15 16:17:29,104 | INFO     | sum of square deviations: 4560048290.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,106 | INFO     | sum of deviations: 41818298862.99999
[2026-02-15 17:18:38] 2026-02-15 16:17:29,106 | INFO     | mean x: 1771164757.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,106 | INFO     | mean y: 2372875.714285714
[2026-02-15 17:18:38] 2026-02-15 16:17:29,106 | INFO     | intersect: -16240239577.81277
[2026-02-15 17:18:38] 2026-02-15 16:17:29,107 | INFO     | chi2: 1.371599380522678
[2026-02-15 17:18:38] 2026-02-15 16:17:29,107 | INFO     | sum of square deviations: 4286517580.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,109 | INFO     | sum of deviations: 40724794136.000015
[2026-02-15 17:18:38] 2026-02-15 16:17:29,109 | INFO     | mean x: 1771164604.5
[2026-02-15 17:18:38] 2026-02-15 16:17:29,109 | INFO     | mean y: 2372265.925
[2026-02-15 17:18:38] 2026-02-15 16:17:29,109 | INFO     | intersect: -16824880288.870865
[2026-02-15 17:18:38] 2026-02-15 16:17:29,109 | INFO     | chi2: 1.3719962706803779
[2026-02-15 17:18:38] 2026-02-15 16:17:29,110 | INFO     | current chi2=1.3719962706803779 (change=-0.0289363033649514 %)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,110 | INFO     | right removable region: 239
[2026-02-15 17:18:38] 2026-02-15 16:17:29,110 | INFO     | sum of square deviations: 4286517580.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,112 | INFO     | sum of deviations: 7141101274.000001
[2026-02-15 17:18:38] 2026-02-15 16:17:29,112 | INFO     | mean x: 1771164909.5
[2026-02-15 17:18:38] 2026-02-15 16:17:29,112 | INFO     | mean y: 2392029.7666666666
[2026-02-15 17:18:38] 2026-02-15 16:17:29,112 | INFO     | intersect: -2948270776.4954143
[2026-02-15 17:18:38] 2026-02-15 16:17:29,112 | INFO     | chi2: 0.0020090584947439587
[2026-02-15 17:18:38] 2026-02-15 16:17:29,113 | INFO     | current chi2=0.0020090584947439587 (change=99.85352439471224 %)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,113 | INFO     | sum of square deviations: 4024149870.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,115 | INFO     | sum of deviations: 5578165496.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,115 | INFO     | mean x: 1771165062.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,115 | INFO     | mean y: 2392934.9872340425
[2026-02-15 17:18:38] 2026-02-15 16:17:29,115 | INFO     | intersect: -2452747195.409823
[2026-02-15 17:18:38] 2026-02-15 16:17:29,115 | INFO     | chi2: 0.0009286566366833819
[2026-02-15 17:18:38] 2026-02-15 16:17:29,115 | INFO     | current chi2=0.0009286566366833819 (change=53.77652571525881 %)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,116 | INFO     | sum of square deviations: 3772712597.5
[2026-02-15 17:18:38] 2026-02-15 16:17:29,117 | INFO     | sum of deviations: 4823714080.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,118 | INFO     | mean x: 1771165214.5
[2026-02-15 17:18:38] 2026-02-15 16:17:29,118 | INFO     | mean y: 2393391.2869565217
[2026-02-15 17:18:38] 2026-02-15 16:17:29,118 | INFO     | intersect: -2262182656.4224052
[2026-02-15 17:18:38] 2026-02-15 16:17:29,118 | INFO     | chi2: 0.0007792656253074844
[2026-02-15 17:18:38] 2026-02-15 16:17:29,118 | INFO     | current chi2=0.0007792656253074844 (change=16.08678659848217 %)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,118 | INFO     | left removable region: 30
[2026-02-15 17:18:38] 2026-02-15 16:17:29,119 | INFO     | sum of square deviations: 2830787960.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,120 | INFO     | sum of deviations: 4369620564.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,120 | INFO     | mean x: 1771165489.0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,120 | INFO     | mean y: 2393204.2057416267
[2026-02-15 17:18:38] 2026-02-15 16:17:29,120 | INFO     | intersect: -2731588023.756496
[2026-02-15 17:18:38] 2026-02-15 16:17:29,121 | INFO     | chi2: 0.0005154821650805712
[2026-02-15 17:18:38] 2026-02-15 16:17:29,121 | INFO     | current memory leak: 1.54 B/s (using 209 data points, chi2=0.00)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,121 | INFO     | could have reported an average CPU frequency of 2684 MHz (12 samples)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,121 | INFO     | ..............................
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . Timing measurements:
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . get job = 0 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . initial setup = 8 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . payload setup = 9 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . stage-in = 0 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . payload execution = 14930 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . stage-out = 1 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | . log creation = 0 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,122 | INFO     | ..............................
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | 
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | job summary report
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | --------------------------------------------------
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | PanDA job id: 7005041084
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | task id: 48431096
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | errors: (none)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-15 17:18:38] 2026-02-15 16:17:29,215 | INFO     | pilot state: finished 
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | transexitcode: 0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | exeerrorcode: 0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | exeerrordiag: 
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | exitcode: 0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | exitmsg: OK
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | cpuconsumptiontime: 57309 s
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | nevents: 400
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | neventsw: 0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | pid: 49150
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | pgrp: 49150
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | corecount: 4
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | event service: False
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | sizes: {0: 2281787, 1: 2282248, 12: 2282248, 14943: 2314035, 14945: 2323055, 14947: 2323111, 14950: 2323433}
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | --------------------------------------------------
[2026-02-15 17:18:38] 2026-02-15 16:17:29,216 | INFO     | 
[2026-02-15 17:18:38] 2026-02-15 16:17:29,217 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-02-15 17:18:38] 2026-02-15 16:17:29,245 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,245 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-15 17:18:38] 2026-02-15 16:17:29,247 | INFO     | job 7005041084 has completed (purged errors)
[2026-02-15 17:18:38] 2026-02-15 16:17:29,248 | INFO     | overall cleanup function is called
[2026-02-15 17:18:38] 2026-02-15 16:17:29,505 | WARNING  | process 49150 can no longer be monitored (due to stat problems) - aborting
[2026-02-15 17:18:38] 2026-02-15 16:17:29,931 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-15 17:18:38] 2026-02-15 16:17:30,259 | INFO     | --- collectZombieJob: --- 10, [49150]
[2026-02-15 17:18:38] 2026-02-15 16:17:30,259 | INFO     | zombie collector waiting for pid 49150
[2026-02-15 17:18:38] 2026-02-15 16:17:30,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-15 17:18:38] 2026-02-15 16:17:30,259 | INFO     | collected zombie processes
[2026-02-15 17:18:38] 2026-02-15 16:17:30,259 | INFO     | will attempt to kill all subprocesses of pid=49150
[2026-02-15 17:18:38] 2026-02-15 16:17:31,161 | INFO     | number of running child processes to parent process 49150: 1
[2026-02-15 17:18:38] 2026-02-15 16:17:31,161 | INFO     | maximum number of monitored processes: 6
[2026-02-15 17:18:38] 2026-02-15 16:17:31,161 | INFO     | aborting job monitoring since job object (job id=7005041084) has expired
[2026-02-15 17:18:38] 2026-02-15 16:17:31,475 | INFO     | process IDs to be killed: [49150] (in reverse order)
[2026-02-15 17:18:38] 2026-02-15 16:17:31,737 | WARNING  | found no corresponding commands to process id(s)
[2026-02-15 17:18:38] 2026-02-15 16:17:31,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-15 17:18:38] 2026-02-15 16:17:31,761 | INFO     | did not find any defunct processes belonging to 49150
[2026-02-15 17:18:38] 2026-02-15 16:17:31,780 | INFO     | did not find any defunct processes belonging to 49150
[2026-02-15 17:18:38] 2026-02-15 16:17:31,780 | INFO     | ready for new job
[2026-02-15 17:18:38] 2026-02-15 16:17:31,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-15 17:18:38] 2026-02-15 16:17:31,783 | INFO     | **************************************
[2026-02-15 17:18:38] 2026-02-15 16:17:31,783 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-15 17:18:38] 2026-02-15 16:17:31,783 | INFO     | **************************************
[2026-02-15 17:18:38] 2026-02-15 16:17:31,783 | INFO     | 
[2026-02-15 17:18:38] 2026-02-15 16:17:31,791 | INFO     | architecture information:
[2026-02-15 17:18:38] 2026-02-15 16:17:31,791 | INFO     | executing command: cat /etc/os-release
[2026-02-15 17:18:38] 2026-02-15 16:17:31,817 | INFO     | cat /etc/os-release:
[2026-02-15 17:18:38] NAME="CentOS Linux"
[2026-02-15 17:18:38] VERSION="7 (Core)"
[2026-02-15 17:18:38] ID="centos"
[2026-02-15 17:18:38] ID_LIKE="rhel fedora"
[2026-02-15 17:18:38] VERSION_ID="7"
[2026-02-15 17:18:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-15 17:18:38] ANSI_COLOR="0;31"
[2026-02-15 17:18:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-15 17:18:38] HOME_URL="https://www.centos.org/"
[2026-02-15 17:18:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-15 17:18:38] 
[2026-02-15 17:18:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-15 17:18:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-15 17:18:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-15 17:18:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-15 17:18:38] 
[2026-02-15 17:18:38] 2026-02-15 16:17:31,817 | INFO     | **************************************
[2026-02-15 17:18:38] 2026-02-15 16:17:32,320 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-02-15 17:18:38] 2026-02-15 16:17:32,349 | INFO     | sufficient remaining disk space (3207664238592 B)
[2026-02-15 17:18:38] 2026-02-15 16:17:32,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-15 17:18:38] 2026-02-15 16:17:32,350 | INFO     | current server update state: UPDATING_FINAL
[2026-02-15 17:18:38] 2026-02-15 16:17:32,350 | INFO     | update_server=False
[2026-02-15 17:18:38] 2026-02-15 16:17:32,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-15 17:18:38] 2026-02-15 16:17:32,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-15 17:18:38] 2026-02-15 16:17:32,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-15 17:18:38] 2026-02-15 16:17:32,351 | INFO     | aborting loop
[2026-02-15 17:18:38] 2026-02-15 16:17:32,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-15 17:18:38] 2026-02-15 16:17:32,868 | INFO     | all job control threads have been joined
[2026-02-15 17:18:38] 2026-02-15 16:17:32,960 | INFO     | all payload control threads have been joined
[2026-02-15 17:18:38] 2026-02-15 16:17:33,246 | INFO     | all data control threads have been joined
[2026-02-15 17:18:38] 2026-02-15 16:17:33,355 | INFO     | [job] retrieve thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:33,356 | INFO     | [job] job monitor thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:33,383 | INFO     | [job] create_data_payload thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:33,436 | INFO     | [data] copytool_in thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:33,562 | INFO     | [payload] execute_payloads thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:33,873 | INFO     | [job] control thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:33,965 | INFO     | [payload] control thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,201 | INFO     | [job] validate thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-15 17:18:38] 2026-02-15 16:17:34,249 | INFO     | [data] control thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,356 | INFO     | [data] copytool_out thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,405 | INFO     | [payload] validate_post thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,719 | INFO     | [payload] validate_pre thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:34,771 | INFO     | [payload] failed_post thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:35,229 | INFO     | [job] queue monitor thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:17:36,451 | INFO     | [data] queue_monitor thread has finished
[2026-02-15 17:18:38] 2026-02-15 16:18:01,630 | INFO     | PID=44007 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-15 17:18:38] 2026-02-15 16:18:01,630 | INFO     | .. there are 25 such processes running
[2026-02-15 17:18:38] 2026-02-15 16:18:01,631 | INFO     | found 0 job(s) in 20 queues
[2026-02-15 17:18:38] 2026-02-15 16:18:01,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-15 17:18:38] 2026-02-15 16:18:01,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-15 17:18:38] 2026-02-15 16:18:31,801 | INFO     | [monitor] cgroup control has ended
[2026-02-15 17:18:38] 2026-02-15 16:18:32,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22971510970176)>', '<ExcThread(monitor, started 22971266893568)>']
[2026-02-15 17:18:38] 2026-02-15 16:18:32,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-15 17:18:38] 2026-02-15 16:18:32,767 | INFO     | [monitor] control thread has ended
[2026-02-15 17:18:38] 2026-02-15 16:18:37,747 | INFO     | all workflow threads have been joined
[2026-02-15 17:18:38] 2026-02-15 16:18:37,747 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-15 17:18:38] 2026-02-15 16:18:37,747 | INFO     | traces error code: 0
[2026-02-15 17:18:38] 2026-02-15 16:18:37,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-15 17:18:38] 2026-02-15 16:18:37,885 [wrapper] ==== pilot stdout END ====
[2026-02-15 17:18:38] 2026-02-15 16:18:37,889 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-15 17:18:38] 2026-02-15 16:18:37,893 [wrapper] pilotpid: 44007
[2026-02-15 17:18:38] 2026-02-15 16:18:37,897 [wrapper] Pilot exit status: 0
[2026-02-15 17:18:38] 2026-02-15 16:18:37,914 [wrapper] pandaids: 7005041084
[2026-02-15 17:18:38] 2026-02-15 16:18:38,080 [wrapper] cleanup supervisor_pilot  631268 44008
[2026-02-15 17:18:38] 2026-02-15 16:18:38,086 [wrapper] Test setup, not cleaning
[2026-02-15 17:18:38] 2026-02-15 16:18:38,090 [wrapper] apfmon messages muted
[2026-02-15 17:18:38] 2026-02-15 16:18:38,093 [wrapper] ==== wrapper stdout END ====
[2026-02-15 17:18:38] 2026-02-15 16:18:38,096 [wrapper] ==== wrapper stderr END ====
[2026-02-15 17:18:38]  *** Error codes and diagnostics ***
[2026-02-15 17:18:38]     "exeErrorCode": 0,
[2026-02-15 17:18:38]     "exeErrorDiag": "",
[2026-02-15 17:18:38]     "pilotErrorCode": 0,
[2026-02-15 17:18:38]     "pilotErrorDiag": "",
[2026-02-15 17:18:38]  *** Listing of results directory ***
[2026-02-15 17:18:38] total 1245280
[2026-02-15 17:18:38] -rwx------ 1 boinc boinc     36322 Feb  7 02:46 runpilot2-wrapper.sh
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc    584627 Feb  7 02:47 pilot3.tar.gz
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc      5111 Feb  7 02:50 queuedata.json
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc       100 Feb 11 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-15 17:18:38] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 11:00 run_atlas
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc       105 Feb 11 11:00 job.xml
[2026-02-15 17:18:38] -rw------- 2 boinc boinc 249036800 Feb 11 11:31 copy_YIxT03
[2026-02-15 17:18:38] -rw------- 2 boinc boinc  40239104 Feb 13 12:02 copy_y6XvHN
[2026-02-15 17:18:38] -rw------- 2 boinc boinc  11927552 Feb 14 11:37 copy_ynrzB8
[2026-02-15 17:18:38] -rw-r--r-- 2 boinc boinc 683170226 Feb 15 13:07 EVNT.48431094._000296.pool.root.1
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc      6695 Feb 15 13:07 init_data.xml
[2026-02-15 17:18:38] drwxrwx--x 2 boinc boinc      4096 Feb 15 13:07 shared
[2026-02-15 17:18:38] -rw-r--r-- 2 boinc boinc    597956 Feb 15 13:07 input.tar.gz
[2026-02-15 17:18:38] -rw-r--r-- 2 boinc boinc     15845 Feb 15 13:07 start_atlas.sh
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc         0 Feb 15 13:07 boinc_lockfile
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc      2553 Feb 15 13:07 pandaJob.out
[2026-02-15 17:18:38] -rw------- 1 boinc boinc   1000992 Feb 15 13:07 agis_schedconf.cvmfs.json
[2026-02-15 17:18:38] -rw------- 1 boinc boinc       437 Feb 15 13:08 workernode_map.json
[2026-02-15 17:18:38] drwx------ 5 boinc boinc      4096 Feb 15 13:08 pilot3
[2026-02-15 17:18:38] -rw------- 1 boinc boinc 281845882 Feb 15 17:16 HITS.48431096._007371.pool.root.1
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc       531 Feb 15 17:16 boinc_task_state.xml
[2026-02-15 17:18:38] -rw------- 1 boinc boinc      1032 Feb 15 17:17 memory_monitor_summary.json
[2026-02-15 17:18:38] -rw------- 1 boinc boinc   1513015 Feb 15 17:17 agis_ddmendpoints.agis.ALL.json
[2026-02-15 17:18:38] -rw------- 1 boinc boinc    426046 Feb 15 17:17 log.48431096._007371.job.log.tgz.1
[2026-02-15 17:18:38] -rw------- 1 boinc boinc      6352 Feb 15 17:17 heartbeat.json
[2026-02-15 17:18:38] -rw------- 1 boinc boinc        95 Feb 15 17:18 pilot_heartbeat.json
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc      8192 Feb 15 17:18 boinc_mmap_file
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc        28 Feb 15 17:18 wrapper_checkpoint.txt
[2026-02-15 17:18:38] -rw------- 1 boinc boinc      4830 Feb 15 17:18 pilotlog.txt
[2026-02-15 17:18:38] -rw------- 1 boinc boinc   2073928 Feb 15 17:18 log.48431096._007371.job.log.1
[2026-02-15 17:18:38] -rw------- 1 boinc boinc       357 Feb 15 17:18 output.list
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc       620 Feb 15 17:18 runtime_log
[2026-02-15 17:18:38] -rw------- 1 boinc boinc   2519040 Feb 15 17:18 result.tar.gz
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc      9205 Feb 15 17:18 runtime_log.err
[2026-02-15 17:18:38] -rw------- 1 boinc boinc       665 Feb 15 17:18 2MYMDmSam88n9Rq4apOajLDm4fhM0noT9bVooX4SDm30ZKDmSZQW4n.diag
[2026-02-15 17:18:38] -rw-r--r-- 1 boinc boinc     20849 Feb 15 17:18 stderr.txt
[2026-02-15 17:18:38] HITS file was successfully produced:
[2026-02-15 17:18:38] -rw------- 1 boinc boinc 281845882 Feb 15 17:16 shared/HITS.pool.root.1
[2026-02-15 17:18:38]  *** Contents of shared directory: ***
[2026-02-15 17:18:38] total 1239624
[2026-02-15 17:18:38] -rw------- 2 boinc boinc 249036800 Feb 11 11:31 copy_YIxT03
[2026-02-15 17:18:38] -rw------- 2 boinc boinc  40239104 Feb 13 12:02 copy_y6XvHN
[2026-02-15 17:18:38] -rw------- 2 boinc boinc  11927552 Feb 14 11:37 copy_ynrzB8
[2026-02-15 17:18:38] -rw-r--r-- 2 boinc boinc 683170226 Feb 15 13:07 ATLAS.root_0
[2026-02-15 17:18:38] -rw-r--r-- 2 boinc boinc    597956 Feb 15 13:07 input.tar.gz
[2026-02-15 17:18:38] -rw-r--r-- 2 boinc boinc     15845 Feb 15 13:07 start_atlas.sh
[2026-02-15 17:18:38] -rw------- 1 boinc boinc 281845882 Feb 15 17:16 HITS.pool.root.1
[2026-02-15 17:18:38] -rw------- 1 boinc boinc   2519040 Feb 15 17:18 result.tar.gz
17:18:40 (40017): run_atlas exited; CPU time 58178.048147
17:18:40 (40017): called boinc_finish(0)

</stderr_txt>
]]>

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