Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:14 (2804779): wrapper (7.7.26015): starting
21:30:14 (2804779): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 21:30:14] Arguments: --nthreads 8
[2026-02-06 21:30:14] Threads: 8
[2026-02-06 21:30:14] Checking for CVMFS
[2026-02-06 21:30:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 21:30:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 21:30:15] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 21:30:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 21:30:16] 2.13.3.0 8759 62542 180640 155967 0 412 37186512 40960001 31664 16776704 0 483796056 99.707 358905862 45304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 21:30:16] CVMFS is ok
[2026-02-06 21:30:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 21:30:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 21:30:16] Further information can be found at the LHC@home message board.
[2026-02-06 21:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 21:30:16] Checking for apptainer binary...
[2026-02-06 21:30:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 21:30:16] Running /usr/bin/apptainer --version
[2026-02-06 21:30:17] apptainer version 1.4.5-2.el9
[2026-02-06 21:30:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 21:30:17] c-208-39.aglt2.org
[2026-02-06 21:30:17] apptainer works
[2026-02-06 21:30:17] Set ATHENA_PROC_NUMBER=8
[2026-02-06 21:30:17] Set ATHENA_CORE_NUMBER=8
[2026-02-06 21:30:17] Starting ATLAS job with PandaID=6998348732
[2026-02-06 21:30:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 23:31:38]  *** The last 200 lines of the pilot log: ***
[2026-02-06 23:31:38] 2026-02-07 04:30:40,115 | INFO     | log transfer has been attempted: DONE
[2026-02-06 23:31:38] 2026-02-07 04:30:40,115 | INFO     | job 6998348732 has finished - writing final server update
[2026-02-06 23:31:38] 2026-02-07 04:30:40,115 | INFO     | total number of processed events: 400 (read)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,138 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6998348732/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,138 | INFO     | extracted standard info from prmon json
[2026-02-06 23:31:38] 2026-02-07 04:30:40,138 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 23:31:38] 2026-02-07 04:30:40,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 23:31:38] 2026-02-07 04:30:40,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 23:31:38] 2026-02-07 04:30:40,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 23:31:38] 2026-02-07 04:30:40,140 | INFO     | fitting pss+swap vs Time
[2026-02-06 23:31:38] 2026-02-07 04:30:40,140 | INFO     | sum of square deviations: 471587468.782609
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | sum of deviations: 31643067715.99999
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | mean x: 1770435100.0434783
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | mean y: 2410056.8
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | intersect: -118792090361.2844
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | chi2: 5.752458500670799
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | sum of square deviations: 412699193.41818243
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | sum of deviations: 37806022601.490906
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | mean x: 1770434947.5272727
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | mean y: 2425321.3363636364
[2026-02-06 23:31:38] 2026-02-07 04:30:40,141 | INFO     | intersect: -162181326690.1754
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | chi2: 5.056724541441919
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | current chi2=5.056724541441919 (change=12.094549819833555 %)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | right removable region: 109
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | sum of square deviations: 412710421.2727272
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | sum of deviations: -4786833631.999999
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | mean x: 1770435252.5454545
[2026-02-06 23:31:38] 2026-02-07 04:30:40,142 | INFO     | mean y: 2504167.7
[2026-02-06 23:31:38] 2026-02-07 04:30:40,144 | INFO     | intersect: 20536948110.32749
[2026-02-06 23:31:38] 2026-02-07 04:30:40,144 | INFO     | chi2: 1.4241594839654863
[2026-02-06 23:31:38] 2026-02-07 04:30:40,144 | INFO     | current chi2=1.4241594839654863 (change=75.24259438291621 %)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,144 | INFO     | sum of square deviations: 358949748.7619043
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | sum of deviations: -15531071185.000002
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | mean x: 1770435405.047619
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | mean y: 2534074.2
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | intersect: 76605898191.5484
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | chi2: 0.8464403717063639
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | current chi2=0.8464403717063639 (change=40.56561914333487 %)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | sum of square deviations: 310072888.7500002
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | sum of deviations: -13967409694.550001
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | mean x: 1770435557.55
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | mean y: 2529128.01
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | intersect: 79752806134.77359
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | chi2: 0.845190087719591
[2026-02-06 23:31:38] 2026-02-07 04:30:40,145 | INFO     | current chi2=0.845190087719591 (change=0.14771081680004994 %)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | left removable region: 30
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | sum of square deviations: 152865758.8860762
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | sum of deviations: -907845038.2531646
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | mean x: 1770435832.0379746
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | mean y: 2528154.417721519
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | intersect: 10516860450.763569
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | chi2: 0.008913474747880474
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | current memory leak: -5.94 B/s (using 79 data points, chi2=0.01)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | could have reported an average CPU frequency of 3749 MHz (7 samples)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | ..............................
[2026-02-06 23:31:38] 2026-02-07 04:30:40,146 | INFO     | . Timing measurements:
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . get job = 0 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . initial setup = 40 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . payload setup = 56 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . stage-in = 0 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . payload execution = 7038 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . stage-out = 3 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | . log creation = 1 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,147 | INFO     | ..............................
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | 
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | job summary report
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | --------------------------------------------------
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | PanDA job id: 6998348732
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | task id: 48318026
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | errors: (none)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | pilot state: finished 
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | transexitcode: 0
[2026-02-06 23:31:38] 2026-02-07 04:30:40,201 | INFO     | exeerrorcode: 0
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | exeerrordiag: 
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | exitcode: 0
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | exitmsg: OK
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | cpuconsumptiontime: 27019 s
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | nevents: 400
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | neventsw: 0
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | pid: 2825043
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | pgrp: 2825043
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | corecount: 8
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | event service: False
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | sizes: {0: 2281993, 1: 2282678, 2: 2283139, 7099: 2310434, 7103: 2319432, 7104: 2319488, 7105: 2319810}
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | --------------------------------------------------
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | 
[2026-02-06 23:31:38] 2026-02-07 04:30:40,202 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-06 23:31:38] 2026-02-07 04:30:40,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 23:31:38] 2026-02-07 04:30:40,302 | INFO     | job 6998348732 has completed (purged errors)
[2026-02-06 23:31:38] 2026-02-07 04:30:40,302 | INFO     | overall cleanup function is called
[2026-02-06 23:31:38] 2026-02-07 04:30:41,309 | INFO     | --- collectZombieJob: --- 10, [2825043]
[2026-02-06 23:31:38] 2026-02-07 04:30:41,309 | INFO     | zombie collector waiting for pid 2825043
[2026-02-06 23:31:38] 2026-02-07 04:30:41,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 23:31:38] 2026-02-07 04:30:41,309 | INFO     | collected zombie processes
[2026-02-06 23:31:38] 2026-02-07 04:30:41,309 | INFO     | will attempt to kill all subprocesses of pid=2825043
[2026-02-06 23:31:38] 2026-02-07 04:30:42,503 | INFO     | process IDs to be killed: [2825043] (in reverse order)
[2026-02-06 23:31:38] 2026-02-07 04:30:43,355 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 23:31:38] 2026-02-07 04:30:43,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 23:31:38] 2026-02-07 04:30:43,425 | INFO     | did not find any defunct processes belonging to 2825043
[2026-02-06 23:31:38] 2026-02-07 04:30:43,488 | INFO     | did not find any defunct processes belonging to 2825043
[2026-02-06 23:31:38] 2026-02-07 04:30:43,488 | INFO     | ready for new job
[2026-02-06 23:31:38] 2026-02-07 04:30:43,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 23:31:38] 2026-02-07 04:30:43,489 | INFO     | **************************************
[2026-02-06 23:31:38] 2026-02-07 04:30:43,489 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 23:31:38] 2026-02-07 04:30:43,489 | INFO     | **************************************
[2026-02-06 23:31:38] 2026-02-07 04:30:43,489 | INFO     | 
[2026-02-06 23:31:38] 2026-02-07 04:30:43,498 | INFO     | architecture information:
[2026-02-06 23:31:38] 2026-02-07 04:30:43,498 | INFO     | executing command: cat /etc/os-release
[2026-02-06 23:31:38] 2026-02-07 04:30:43,562 | INFO     | cat /etc/os-release:
[2026-02-06 23:31:38] NAME="CentOS Linux"
[2026-02-06 23:31:38] VERSION="7 (Core)"
[2026-02-06 23:31:38] ID="centos"
[2026-02-06 23:31:38] ID_LIKE="rhel fedora"
[2026-02-06 23:31:38] VERSION_ID="7"
[2026-02-06 23:31:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 23:31:38] ANSI_COLOR="0;31"
[2026-02-06 23:31:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 23:31:38] HOME_URL="https://www.centos.org/"
[2026-02-06 23:31:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 23:31:38] 
[2026-02-06 23:31:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 23:31:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 23:31:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 23:31:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 23:31:38] 
[2026-02-06 23:31:38] 2026-02-07 04:30:43,562 | INFO     | **************************************
[2026-02-06 23:31:38] 2026-02-07 04:30:44,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-06 23:31:38] 2026-02-07 04:30:44,103 | INFO     | sufficient remaining disk space (161582415872 B)
[2026-02-06 23:31:38] 2026-02-07 04:30:44,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 23:31:38] 2026-02-07 04:30:44,104 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 23:31:38] 2026-02-07 04:30:44,104 | INFO     | update_server=False
[2026-02-06 23:31:38] 2026-02-07 04:30:44,104 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 23:31:38] 2026-02-07 04:30:44,214 | INFO     | all job control threads have been joined
[2026-02-06 23:31:38] 2026-02-07 04:30:44,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 23:31:38] 2026-02-07 04:30:44,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 23:31:38] 2026-02-07 04:30:44,672 | INFO     | aborting loop
[2026-02-06 23:31:38] 2026-02-07 04:30:44,793 | INFO     | all data control threads have been joined
[2026-02-06 23:31:38] 2026-02-07 04:30:44,889 | INFO     | all payload control threads have been joined
[2026-02-06 23:31:38] 2026-02-07 04:30:45,115 | INFO     | [job] retrieve thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,157 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,158 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,217 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,226 | INFO     | [job] control thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 23:31:38] 2026-02-07 04:30:45,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 23:31:38] 2026-02-07 04:30:45,655 | INFO     | [data] copytool_in thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,666 | INFO     | [payload] validate_post thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,672 | INFO     | [job] validate thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,674 | INFO     | [payload] failed_post thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,676 | INFO     | [job] job monitor thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,799 | INFO     | [data] control thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,895 | INFO     | [payload] control thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:45,984 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:46,254 | INFO     | [job] queue monitor thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:46,550 | INFO     | [data] copytool_out thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:30:49,484 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 23:31:38] 2026-02-07 04:31:14,779 | INFO     | PID=2816811 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 23:31:38] 2026-02-07 04:31:14,779 | INFO     | .. there are 37 such processes running
[2026-02-06 23:31:38] 2026-02-07 04:31:14,780 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 23:31:38] 2026-02-07 04:31:14,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 23:31:38] 2026-02-07 04:31:14,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 23:31:38] 2026-02-07 04:31:25,535 | INFO     | [monitor] cgroup control has ended
[2026-02-06 23:31:38] 2026-02-07 04:31:27,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698950973248)>', '<ExcThread(monitor, started 140698397423360)>']
[2026-02-06 23:31:38] 2026-02-07 04:31:27,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 23:31:38] 2026-02-07 04:31:27,875 | INFO     | [monitor] control thread has ended
[2026-02-06 23:31:38] 2026-02-07 04:31:28,909 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-02-06 23:31:38] 2026-02-07 04:31:32,177 | INFO     | all workflow threads have been joined
[2026-02-06 23:31:38] 2026-02-07 04:31:32,177 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 23:31:38] 2026-02-07 04:31:32,178 | INFO     | traces error code: 0
[2026-02-06 23:31:38] 2026-02-07 04:31:32,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 23:31:38] 2026-02-07 04:31:33,715 [wrapper] ==== pilot stdout END ====
[2026-02-06 23:31:38] 2026-02-07 04:31:33,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 23:31:38] 2026-02-07 04:31:33,769 [wrapper] pilotpid: 2816811
[2026-02-06 23:31:38] 2026-02-07 04:31:33,799 [wrapper] Pilot exit status: 0
[2026-02-06 23:31:38] 2026-02-07 04:31:34,226 [wrapper] pandaids: 6998348732
[2026-02-06 23:31:38] 2026-02-07 04:31:36,064 [wrapper] cleanup supervisor_pilot 3552942 2816812
[2026-02-06 23:31:38] 2026-02-07 04:31:36,215 [wrapper] Test setup, not cleaning
[2026-02-06 23:31:38] 2026-02-07 04:31:36,264 [wrapper] apfmon messages muted
[2026-02-06 23:31:38] 2026-02-07 04:31:36,308 [wrapper] ==== wrapper stdout END ====
[2026-02-06 23:31:38] 2026-02-07 04:31:36,355 [wrapper] ==== wrapper stderr END ====
[2026-02-06 23:31:38]  *** Error codes and diagnostics ***
[2026-02-06 23:31:38]     "exeErrorCode": 0,
[2026-02-06 23:31:38]     "exeErrorDiag": "",
[2026-02-06 23:31:38]     "pilotErrorCode": 0,
[2026-02-06 23:31:38]     "pilotErrorDiag": "",
[2026-02-06 23:31:38]  *** Listing of results directory ***
[2026-02-06 23:31:38] total 731388
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas    584627 Feb  6 13:42 pilot3.tar.gz
[2026-02-06 23:31:38] -rwx------. 1 boincer umatlas     36322 Feb  6 13:45 runpilot2-wrapper.sh
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas      5111 Feb  6 13:48 queuedata.json
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas       100 Feb  6 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 23:31:38] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 21:30 run_atlas
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas       105 Feb  6 21:30 job.xml
[2026-02-06 23:31:38] -rw-r--r--. 2 boincer umatlas 534475463 Feb  6 21:30 EVNT.48318024._000100.pool.root.1
[2026-02-06 23:31:38] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 21:30 shared
[2026-02-06 23:31:38] -rw-r--r--. 2 boincer umatlas    597963 Feb  6 21:30 input.tar.gz
[2026-02-06 23:31:38] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 21:30 start_atlas.sh
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas         0 Feb  6 21:30 boinc_lockfile
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas      2526 Feb  6 21:30 pandaJob.out
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas        57 Feb  6 21:30 setup.sh.local
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas   1009520 Feb  6 21:31 agis_schedconf.cvmfs.json
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas   1513088 Feb  6 21:31 agis_ddmendpoints.agis.ALL.json
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas       431 Feb  6 21:32 workernode_map.json
[2026-02-06 23:31:38] drwx------. 5 boincer umatlas      4096 Feb  6 21:32 pilot3
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas      7184 Feb  6 23:27 init_data.xml
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas 207910218 Feb  6 23:28 HITS.48318026._004982.pool.root.1
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas       530 Feb  6 23:29 boinc_task_state.xml
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas      1053 Feb  6 23:30 memory_monitor_summary.json
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas    360578 Feb  6 23:30 log.48318026._004982.job.log.tgz.1
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas      6367 Feb  6 23:30 heartbeat.json
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas        95 Feb  6 23:31 pilot_heartbeat.json
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas      4821 Feb  6 23:31 pilotlog.txt
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas      8192 Feb  6 23:31 boinc_mmap_file
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas        27 Feb  6 23:31 wrapper_checkpoint.txt
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas    939454 Feb  6 23:31 log.48318026._004982.job.log.1
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas       357 Feb  6 23:31 output.list
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas       620 Feb  6 23:31 runtime_log
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas   1320960 Feb  6 23:31 result.tar.gz
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas      9341 Feb  6 23:31 runtime_log.err
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas       657 Feb  6 23:31 3IZLDmW0f88n9Rq4apOajLDm4fhM0noT9bVooX4SDm9IZKDmLUo1Vo.diag
[2026-02-06 23:31:38] -rw-r--r--. 1 boincer umatlas     21065 Feb  6 23:31 stderr.txt
[2026-02-06 23:31:38] HITS file was successfully produced:
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas 207910218 Feb  6 23:28 shared/HITS.pool.root.1
[2026-02-06 23:31:38]  *** Contents of shared directory: ***
[2026-02-06 23:31:38] total 726892
[2026-02-06 23:31:38] -rw-r--r--. 2 boincer umatlas 534475463 Feb  6 21:30 ATLAS.root_0
[2026-02-06 23:31:38] -rw-r--r--. 2 boincer umatlas    597963 Feb  6 21:30 input.tar.gz
[2026-02-06 23:31:38] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 21:30 start_atlas.sh
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas 207910218 Feb  6 23:28 HITS.pool.root.1
[2026-02-06 23:31:38] -rw-------. 1 boincer umatlas   1320960 Feb  6 23:31 result.tar.gz
23:31:40 (2804779): run_atlas exited; CPU time 27256.760069
23:31:40 (2804779): called boinc_finish(0)

</stderr_txt>
]]>

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