Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:50:38 (2227438): wrapper (7.7.26015): starting
10:50:38 (2227438): wrapper: running run_atlas (--nthreads 2)
[2026-02-07 10:50:38] Arguments: --nthreads 2
[2026-02-07 10:50:38] Threads: 2
[2026-02-07 10:50:38] Checking for CVMFS
[2026-02-07 10:50:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 10:50:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 10:50:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 10:50:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 10:50:38] 2.9.2.0 2050517 1727 57328 155978 0 49 33363149 36864001 0 130560 0 529428 99.978 68275 21256 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 10:50:38] CVMFS is ok
[2026-02-07 10:50:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 10:50:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 10:50:38] Further information can be found at the LHC@home message board.
[2026-02-07 10:50:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 10:50:38] Checking for apptainer binary...
[2026-02-07 10:50:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 10:50:38] Running /usr/bin/apptainer --version
[2026-02-07 10:50:38] apptainer version 1.4.1-1.1
[2026-02-07 10:50:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 10:50:38] atlasA229
[2026-02-07 10:50:38] apptainer works
[2026-02-07 10:50:38] Set ATHENA_PROC_NUMBER=2
[2026-02-07 10:50:38] Set ATHENA_CORE_NUMBER=2
[2026-02-07 10:50:38] Starting ATLAS job with PandaID=6998414234
[2026-02-07 10:50:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 12:52:15]  *** The last 200 lines of the pilot log: ***
[2026-02-07 12:52:15] 2026-02-07 11:51:42,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 12:52:15] 2026-02-07 11:51:42,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 12:52:15] 2026-02-07 11:51:42,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 12:52:15] 2026-02-07 11:51:42,205 | INFO     | aborting loop
[2026-02-07 12:52:15] 2026-02-07 11:51:42,365 | INFO     | all payload control threads have been joined
[2026-02-07 12:52:15] 2026-02-07 11:51:42,648 | INFO     | all data control threads have been joined
[2026-02-07 12:52:15] 2026-02-07 11:51:42,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 12:52:15] 2026-02-07 11:51:43,211 | INFO     | [job] retrieve thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:43,211 | INFO     | [job] job monitor thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:43,212 | INFO     | [job] queue monitor thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:43,262 | INFO     | [payload] validate_post thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:43,371 | INFO     | [payload] control thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:43,461 | INFO     | all job control threads have been joined
[2026-02-07 12:52:15] 2026-02-07 11:51:43,654 | INFO     | [data] control thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,111 | INFO     | [job] validate thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,148 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,190 | INFO     | [payload] failed_post thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,273 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,308 | INFO     | [data] copytool_in thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,338 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,467 | INFO     | [job] control thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:44,748 | INFO     | [data] copytool_out thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:45,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 12:52:15] 2026-02-07 11:51:49,113 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:51:52,360 | INFO     | job.realtimelogging is not enabled
[2026-02-07 12:52:15] 2026-02-07 11:51:53,366 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 12:52:15] 2026-02-07 11:52:10,515 | INFO     | [monitor] cgroup control has ended
[2026-02-07 12:52:15] 2026-02-07 11:52:10,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466095003456)>', '<ExcThread(monitor, started 140465093474048)>']
[2026-02-07 12:52:15] 2026-02-07 11:52:11,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 12:52:15] 2026-02-07 11:52:11,362 | INFO     | [monitor] control thread has ended
[2026-02-07 12:52:15] 2026-02-07 11:52:15,555 | INFO     | all workflow threads have been joined
[2026-02-07 12:52:15] 2026-02-07 11:52:15,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 12:52:15] 2026-02-07 11:52:15,556 | INFO     | traces error code: 0
[2026-02-07 12:52:15] 2026-02-07 11:52:15,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 12:52:15] 2026-02-07 11:52:15,599 [wrapper] ==== pilot stdout END ====
[2026-02-07 12:52:15] 2026-02-07 11:52:15,602 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 12:52:15] 2026-02-07 11:52:15,605 [wrapper] pilotpid: 2231463
[2026-02-07 12:52:15] 2026-02-07 11:52:15,607 [wrapper] Pilot exit status: 0
[2026-02-07 12:52:15] 2026-02-07 11:52:15,613 [wrapper] pandaids: 6998414234
[2026-02-07 12:52:15] 2026-02-07 11:52:15,626 [wrapper] cleanup supervisor_pilot 2240765 2231464
[2026-02-07 12:52:15] 2026-02-07 11:52:15,629 [wrapper] Test setup, not cleaning
[2026-02-07 12:52:15] 2026-02-07 11:52:15,631 [wrapper] apfmon messages muted
[2026-02-07 12:52:15] 2026-02-07 11:52:15,633 [wrapper] ==== wrapper stdout END ====
[2026-02-07 12:52:15] 2026-02-07 11:52:15,635 [wrapper] ==== wrapper stderr END ====
[2026-02-07 12:52:15]  *** Error codes and diagnostics ***
[2026-02-07 12:52:15]     "exeErrorCode": 0,
[2026-02-07 12:52:15]     "exeErrorDiag": "",
[2026-02-07 12:52:15]     "pilotErrorCode": 0,
[2026-02-07 12:52:15]     "pilotErrorDiag": "",
[2026-02-07 12:52:15]  *** Listing of results directory ***
[2026-02-07 12:52:15] total 673728
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc    584627 Feb  6 19:42 pilot3.tar.gz
[2026-02-07 12:52:15] -rwx------ 1 boinc boinc     36322 Feb  6 19:45 runpilot2-wrapper.sh
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc      5111 Feb  6 19:48 queuedata.json
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc       100 Feb  7 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 12:52:15] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 10:50 run_atlas
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc       105 Feb  7 10:50 job.xml
[2026-02-07 12:52:15] -rw-r--r-- 2 boinc boinc 501846733 Feb  7 10:50 EVNT.48442027._000047.pool.root.1
[2026-02-07 12:52:15] -rw-r--r-- 2 boinc boinc    597960 Feb  7 10:50 input.tar.gz
[2026-02-07 12:52:15] -rw-r--r-- 2 boinc boinc     15845 Feb  7 10:50 start_atlas.sh
[2026-02-07 12:52:15] drwxrwx--x 2 boinc boinc      4096 Feb  7 10:50 shared
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc         0 Feb  7 10:50 boinc_setup_complete
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc      6206 Feb  7 10:50 init_data.xml
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc         0 Feb  7 10:50 boinc_lockfile
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc      2528 Feb  7 10:50 pandaJob.out
[2026-02-07 12:52:15] -rw------- 1 boinc boinc   1009504 Feb  7 10:50 agis_schedconf.cvmfs.json
[2026-02-07 12:52:15] -rw------- 1 boinc boinc   1513088 Feb  7 10:50 agis_ddmendpoints.agis.ALL.json
[2026-02-07 12:52:15] -rw------- 1 boinc boinc       429 Feb  7 10:51 workernode_map.json
[2026-02-07 12:52:15] drwx------ 5 boinc boinc      4096 Feb  7 10:51 pilot3
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc       530 Feb  7 12:51 boinc_task_state.xml
[2026-02-07 12:52:15] -rw------- 1 boinc boinc 181438604 Feb  7 12:51 HITS.48442031._002372.pool.root.1
[2026-02-07 12:52:15] -rw------- 1 boinc boinc        95 Feb  7 12:51 pilot_heartbeat.json
[2026-02-07 12:52:15] -rw------- 1 boinc boinc      1013 Feb  7 12:51 memory_monitor_summary.json
[2026-02-07 12:52:15] -rw------- 1 boinc boinc    298495 Feb  7 12:51 log.48442031._002372.job.log.tgz.1
[2026-02-07 12:52:15] -rw------- 1 boinc boinc      6305 Feb  7 12:51 heartbeat.json
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc      8192 Feb  7 12:51 boinc_mmap_file
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc        27 Feb  7 12:51 wrapper_checkpoint.txt
[2026-02-07 12:52:15] -rw------- 1 boinc boinc      4624 Feb  7 12:52 pilotlog.txt
[2026-02-07 12:52:15] -rw------- 1 boinc boinc   1044164 Feb  7 12:52 log.48442031._002372.job.log.1
[2026-02-07 12:52:15] -rw------- 1 boinc boinc       357 Feb  7 12:52 output.list
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc       620 Feb  7 12:52 runtime_log
[2026-02-07 12:52:15] -rw------- 1 boinc boinc   1361920 Feb  7 12:52 result.tar.gz
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc      8911 Feb  7 12:52 runtime_log.err
[2026-02-07 12:52:15] -rw------- 1 boinc boinc       660 Feb  7 12:52 6dQODmh0f88n9Rq4apOajLDm4fhM0noT9bVooX4SDmAKZKDmtsvXfn.diag
[2026-02-07 12:52:15] -rw-r--r-- 1 boinc boinc      6854 Feb  7 12:52 stderr.txt
[2026-02-07 12:52:15] HITS file was successfully produced:
[2026-02-07 12:52:15] -rw------- 1 boinc boinc 181438604 Feb  7 12:51 shared/HITS.pool.root.1
[2026-02-07 12:52:15]  *** Contents of shared directory: ***
[2026-02-07 12:52:15] total 669216
[2026-02-07 12:52:15] -rw-r--r-- 2 boinc boinc 501846733 Feb  7 10:50 ATLAS.root_0
[2026-02-07 12:52:15] -rw-r--r-- 2 boinc boinc    597960 Feb  7 10:50 input.tar.gz
[2026-02-07 12:52:15] -rw-r--r-- 2 boinc boinc     15845 Feb  7 10:50 start_atlas.sh
[2026-02-07 12:52:15] -rw------- 1 boinc boinc 181438604 Feb  7 12:51 HITS.pool.root.1
[2026-02-07 12:52:15] -rw------- 1 boinc boinc   1361920 Feb  7 12:52 result.tar.gz
12:52:17 (2227438): run_atlas exited; CPU time 14077.899105
12:52:17 (2227438): called boinc_finish(0)

</stderr_txt>
]]>

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