Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:18:26 (16189): wrapper (7.7.26015): starting
11:18:26 (16189): wrapper: running run_atlas (--nthreads 8)
[2026-02-07 11:18:26] Arguments: --nthreads 8
[2026-02-07 11:18:26] Threads: 8
[2026-02-07 11:18:26] Checking for CVMFS
[2026-02-07 11:18:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 11:18:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 11:18:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 11:18:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 11:18:29] 2.11.2.0 6978 77028 131124 155980 2 93 24765726 25165825 1028 130560 0 25744695 99.821 17485626 3440 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-07 11:18:29] CVMFS is ok
[2026-02-07 11:18:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 11:18:29] Checking for apptainer binary...
[2026-02-07 11:18:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 11:18:29] Running /usr/bin/apptainer --version
[2026-02-07 11:18:29] apptainer version 1.3.2-1.el7
[2026-02-07 11:18:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 11:18:46] cg-vwn361.simple-grid.lan
[2026-02-07 11:18:46] apptainer works
[2026-02-07 11:18:46] Set ATHENA_PROC_NUMBER=8
[2026-02-07 11:18:46] Set ATHENA_CORE_NUMBER=8
[2026-02-07 11:18:46] Starting ATLAS job with PandaID=6998371316
[2026-02-07 11:18:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 18:13:12]  *** The last 200 lines of the pilot log: ***
[2026-02-07 18:13:12] 2026-02-07 17:12:14,819 | INFO     | log transfer has been attempted: DONE
[2026-02-07 18:13:12] 2026-02-07 17:12:14,819 | INFO     | job 6998371316 has finished - writing final server update
[2026-02-07 18:13:12] 2026-02-07 17:12:14,819 | INFO     | total number of processed events: 400 (read)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,822 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6998371316/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,822 | INFO     | extracted standard info from prmon json
[2026-02-07 18:13:12] 2026-02-07 17:12:14,823 | INFO     | extracted standard memory fields from prmon json
[2026-02-07 18:13:12] 2026-02-07 17:12:14,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 18:13:12] 2026-02-07 17:12:14,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 18:13:12] 2026-02-07 17:12:14,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 18:13:12] 2026-02-07 17:12:14,831 | INFO     | fitting pss+swap vs Time
[2026-02-07 18:13:12] 2026-02-07 17:12:14,832 | INFO     | sum of square deviations: 19255784295.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,847 | INFO     | sum of deviations: 146963859966.00003
[2026-02-07 18:13:12] 2026-02-07 17:12:14,847 | INFO     | mean x: 1770472255.5
[2026-02-07 18:13:12] 2026-02-07 17:12:14,847 | INFO     | mean y: 2512037.126262626
[2026-02-07 18:13:12] 2026-02-07 17:12:14,848 | INFO     | intersect: -13510073721.25041
[2026-02-07 18:13:12] 2026-02-07 17:12:14,848 | INFO     | chi2: 8.134193705870041
[2026-02-07 18:13:12] 2026-02-07 17:12:14,849 | INFO     | sum of square deviations: 18535566140.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,854 | INFO     | sum of deviations: 199926900918.99997
[2026-02-07 18:13:12] 2026-02-07 17:12:14,854 | INFO     | mean x: 1770472103.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,855 | INFO     | mean y: 2523162.695652174
[2026-02-07 18:13:12] 2026-02-07 17:12:14,855 | INFO     | intersect: -19094007153.282845
[2026-02-07 18:13:12] 2026-02-07 17:12:14,855 | INFO     | chi2: 6.569868081597319
[2026-02-07 18:13:12] 2026-02-07 17:12:14,856 | INFO     | current chi2=6.569868081597319 (change=19.23147740068972 %)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,856 | INFO     | right removable region: 390
[2026-02-07 18:13:12] 2026-02-07 17:12:14,856 | INFO     | sum of square deviations: 18535566140.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,861 | INFO     | sum of deviations: 7984853151.999992
[2026-02-07 18:13:12] 2026-02-07 17:12:14,862 | INFO     | mean x: 1770472408.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,862 | INFO     | mean y: 2541449.864450128
[2026-02-07 18:13:12] 2026-02-07 17:12:14,862 | INFO     | intersect: -760152394.0014819
[2026-02-07 18:13:12] 2026-02-07 17:12:14,863 | INFO     | chi2: 3.629850410418945
[2026-02-07 18:13:12] 2026-02-07 17:12:14,863 | INFO     | current chi2=3.629850410418945 (change=55.37541222064256 %)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,864 | INFO     | sum of square deviations: 17833534372.5
[2026-02-07 18:13:12] 2026-02-07 17:12:14,869 | INFO     | sum of deviations: -76558395168.5
[2026-02-07 18:13:12] 2026-02-07 17:12:14,869 | INFO     | mean x: 1770472560.5
[2026-02-07 18:13:12] 2026-02-07 17:12:14,869 | INFO     | mean y: 2559769.541450777
[2026-02-07 18:13:12] 2026-02-07 17:12:14,869 | INFO     | intersect: 7603102381.597081
[2026-02-07 18:13:12] 2026-02-07 17:12:14,870 | INFO     | chi2: 1.841380388612179
[2026-02-07 18:13:12] 2026-02-07 17:12:14,870 | INFO     | current chi2=1.841380388612179 (change=49.27117703454746 %)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,871 | INFO     | sum of square deviations: 17149456430.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,876 | INFO     | sum of deviations: -84165254531.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,876 | INFO     | mean x: 1770472713.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,876 | INFO     | mean y: 2561450.750656168
[2026-02-07 18:13:12] 2026-02-07 17:12:14,876 | INFO     | intersect: 8691599913.168856
[2026-02-07 18:13:12] 2026-02-07 17:12:14,877 | INFO     | chi2: 1.801313536231986
[2026-02-07 18:13:12] 2026-02-07 17:12:14,877 | INFO     | current chi2=1.801313536231986 (change=2.175913930005011 %)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,877 | INFO     | left removable region: 30
[2026-02-07 18:13:12] 2026-02-07 17:12:14,878 | INFO     | sum of square deviations: 14467136370.0
[2026-02-07 18:13:12] 2026-02-07 17:12:14,882 | INFO     | sum of deviations: 3326190920.0000024
[2026-02-07 18:13:12] 2026-02-07 17:12:14,882 | INFO     | mean x: 1770472987.5
[2026-02-07 18:13:12] 2026-02-07 17:12:14,882 | INFO     | mean y: 2565482.316666667
[2026-02-07 18:13:12] 2026-02-07 17:12:14,882 | INFO     | intersect: -404490276.6474536
[2026-02-07 18:13:12] 2026-02-07 17:12:14,883 | INFO     | chi2: 0.056278513048336254
[2026-02-07 18:13:12] 2026-02-07 17:12:14,883 | INFO     | current memory leak: 0.23 B/s (using 360 data points, chi2=0.06)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,884 | INFO     | could have reported an average CPU frequency of 1999 MHz (17 samples)
[2026-02-07 18:13:12] 2026-02-07 17:12:14,884 | INFO     | ..............................
[2026-02-07 18:13:12] 2026-02-07 17:12:14,884 | INFO     | . Timing measurements:
[2026-02-07 18:13:12] 2026-02-07 17:12:14,884 | INFO     | . get job = 0 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,884 | INFO     | . initial setup = 116 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,884 | INFO     | . payload setup = 151 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,885 | INFO     | . stage-in = 0 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,885 | INFO     | . payload execution = 24240 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,885 | INFO     | . stage-out = 4 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,885 | INFO     | . log creation = 1 s
[2026-02-07 18:13:12] 2026-02-07 17:12:14,885 | INFO     | ..............................
[2026-02-07 18:13:12] 2026-02-07 17:12:15,011 | INFO     | 
[2026-02-07 18:13:12] 2026-02-07 17:12:15,011 | INFO     | job summary report
[2026-02-07 18:13:12] 2026-02-07 17:12:15,011 | INFO     | --------------------------------------------------
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | PanDA job id: 6998371316
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | task id: 48508763
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | errors: (none)
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | pilot state: finished 
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | transexitcode: 0
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | exeerrorcode: 0
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | exeerrordiag: 
[2026-02-07 18:13:12] 2026-02-07 17:12:15,012 | INFO     | exitcode: 0
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | exitmsg: OK
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | cpuconsumptiontime: 90407 s
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | nevents: 400
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | neventsw: 0
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | pid: 24625
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | pgrp: 24625
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | corecount: 8
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | event service: False
[2026-02-07 18:13:12] 2026-02-07 17:12:15,013 | INFO     | sizes: {0: 2282685, 1: 2283086, 2: 2283146, 12: 2283174, 24395: 2318370, 24396: 2318369, 24401: 2327551, 24404: 2327607, 24405: 2327865}
[2026-02-07 18:13:12] 2026-02-07 17:12:15,014 | INFO     | --------------------------------------------------
[2026-02-07 18:13:12] 2026-02-07 17:12:15,014 | INFO     | 
[2026-02-07 18:13:12] 2026-02-07 17:12:15,014 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-07 18:13:12] 2026-02-07 17:12:15,471 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,471 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,471 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,471 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 18:13:12] 2026-02-07 17:12:15,473 | INFO     | job 6998371316 has completed (purged errors)
[2026-02-07 18:13:12] 2026-02-07 17:12:15,474 | INFO     | overall cleanup function is called
[2026-02-07 18:13:12] 2026-02-07 17:12:16,482 | INFO     | --- collectZombieJob: --- 10, [24625]
[2026-02-07 18:13:12] 2026-02-07 17:12:16,482 | INFO     | zombie collector waiting for pid 24625
[2026-02-07 18:13:12] 2026-02-07 17:12:16,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 18:13:12] 2026-02-07 17:12:16,483 | INFO     | collected zombie processes
[2026-02-07 18:13:12] 2026-02-07 17:12:16,483 | INFO     | will attempt to kill all subprocesses of pid=24625
[2026-02-07 18:13:12] 2026-02-07 17:12:16,560 | INFO     | process IDs to be killed: [24625] (in reverse order)
[2026-02-07 18:13:12] 2026-02-07 17:12:16,659 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 18:13:12] 2026-02-07 17:12:16,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 18:13:12] 2026-02-07 17:12:16,662 | INFO     | did not find any defunct processes belonging to 24625
[2026-02-07 18:13:12] 2026-02-07 17:12:16,664 | INFO     | did not find any defunct processes belonging to 24625
[2026-02-07 18:13:12] 2026-02-07 17:12:16,664 | INFO     | ready for new job
[2026-02-07 18:13:12] 2026-02-07 17:12:16,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 18:13:12] 2026-02-07 17:12:16,667 | INFO     | **************************************
[2026-02-07 18:13:12] 2026-02-07 17:12:16,667 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 18:13:12] 2026-02-07 17:12:16,667 | INFO     | **************************************
[2026-02-07 18:13:12] 2026-02-07 17:12:16,667 | INFO     | 
[2026-02-07 18:13:12] 2026-02-07 17:12:16,668 | INFO     | pilot is running in a VM
[2026-02-07 18:13:12] 2026-02-07 17:12:16,668 | INFO     | architecture information:
[2026-02-07 18:13:12] 2026-02-07 17:12:16,668 | INFO     | executing command: cat /etc/os-release
[2026-02-07 18:13:12] 2026-02-07 17:12:16,684 | INFO     | cat /etc/os-release:
[2026-02-07 18:13:12] NAME="CentOS Linux"
[2026-02-07 18:13:12] VERSION="7 (Core)"
[2026-02-07 18:13:12] ID="centos"
[2026-02-07 18:13:12] ID_LIKE="rhel fedora"
[2026-02-07 18:13:12] VERSION_ID="7"
[2026-02-07 18:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 18:13:12] ANSI_COLOR="0;31"
[2026-02-07 18:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 18:13:12] HOME_URL="https://www.centos.org/"
[2026-02-07 18:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 18:13:12] 
[2026-02-07 18:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 18:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 18:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 18:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 18:13:12] 
[2026-02-07 18:13:12] 2026-02-07 17:12:16,685 | INFO     | **************************************
[2026-02-07 18:13:12] 2026-02-07 17:12:17,189 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-07 18:13:12] 2026-02-07 17:12:17,342 | INFO     | sufficient remaining disk space (492111396864 B)
[2026-02-07 18:13:12] 2026-02-07 17:12:17,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 18:13:12] 2026-02-07 17:12:17,343 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 18:13:12] 2026-02-07 17:12:17,343 | INFO     | update_server=False
[2026-02-07 18:13:12] 2026-02-07 17:12:17,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 18:13:12] 2026-02-07 17:12:17,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:13:12] 2026-02-07 17:12:17,344 | INFO     | aborting loop
[2026-02-07 18:13:12] 2026-02-07 17:12:17,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 18:13:12] 2026-02-07 17:12:17,384 | INFO     | all payload control threads have been joined
[2026-02-07 18:13:12] 2026-02-07 17:12:17,739 | INFO     | all data control threads have been joined
[2026-02-07 18:13:12] 2026-02-07 17:12:18,349 | INFO     | [job] retrieve thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,350 | INFO     | [job] job monitor thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,390 | INFO     | [payload] control thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,406 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,421 | INFO     | all job control threads have been joined
[2026-02-07 18:13:12] 2026-02-07 17:12:18,454 | INFO     | [payload] validate_post thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,480 | INFO     | [data] copytool_in thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,732 | INFO     | [payload] failed_post thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,746 | INFO     | [data] control thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,860 | INFO     | [job] validate thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:18,956 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:19,354 | INFO     | [data] copytool_out thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:19,427 | INFO     | [job] control thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:19,552 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:19,608 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:20,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 18:13:12] 2026-02-07 17:12:20,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 18:13:12] 2026-02-07 17:12:21,032 | INFO     | [job] queue monitor thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:24,110 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 18:13:12] 2026-02-07 17:12:47,211 | INFO     | PID=20180 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-07 18:13:12] 2026-02-07 17:12:47,211 | INFO     | .. there are 2 such processes running
[2026-02-07 18:13:12] 2026-02-07 17:12:47,212 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 18:13:12] 2026-02-07 17:12:47,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 18:13:12] 2026-02-07 17:12:47,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 18:13:12] 2026-02-07 17:13:00,210 | INFO     | [monitor] cgroup control has ended
[2026-02-07 18:13:12] 2026-02-07 17:13:01,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908734306112)>', '<ExcThread(monitor, started 139907997615872)>']
[2026-02-07 18:13:12] 2026-02-07 17:13:02,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 18:13:12] 2026-02-07 17:13:02,301 | INFO     | [monitor] control thread has ended
[2026-02-07 18:13:12] 2026-02-07 17:13:06,694 | INFO     | all workflow threads have been joined
[2026-02-07 18:13:12] 2026-02-07 17:13:06,694 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 18:13:12] 2026-02-07 17:13:06,694 | INFO     | traces error code: 0
[2026-02-07 18:13:12] 2026-02-07 17:13:06,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 18:13:12] 2026-02-07 17:13:07,042 [wrapper] ==== pilot stdout END ====
[2026-02-07 18:13:12] 2026-02-07 17:13:07,075 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 18:13:12] 2026-02-07 17:13:07,155 [wrapper] pilotpid: 20180
[2026-02-07 18:13:12] 2026-02-07 17:13:07,246 [wrapper] Pilot exit status: 0
[2026-02-07 18:13:12] 2026-02-07 17:13:07,746 [wrapper] pandaids: 6998371316
[2026-02-07 18:13:12] 2026-02-07 17:13:08,945 [wrapper] cleanup supervisor_pilot   861 20181
[2026-02-07 18:13:12] 2026-02-07 17:13:09,050 [wrapper] Test setup, not cleaning
[2026-02-07 18:13:12] 2026-02-07 17:13:09,139 [wrapper] apfmon messages muted
[2026-02-07 18:13:12] 2026-02-07 17:13:09,240 [wrapper] ==== wrapper stdout END ====
[2026-02-07 18:13:12] 2026-02-07 17:13:09,350 [wrapper] ==== wrapper stderr END ====
[2026-02-07 18:13:12]  *** Error codes and diagnostics ***
[2026-02-07 18:13:12]     "exeErrorCode": 0,
[2026-02-07 18:13:12]     "exeErrorDiag": "",
[2026-02-07 18:13:12]     "pilotErrorCode": 0,
[2026-02-07 18:13:12]     "pilotErrorDiag": "",
[2026-02-07 18:13:12]  *** Listing of results directory ***
[2026-02-07 18:13:12] total 960132
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc    584627 Feb  6 19:42 pilot3.tar.gz
[2026-02-07 18:13:12] -rwx------. 1 boinc boinc     36322 Feb  6 19:44 runpilot2-wrapper.sh
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc      5111 Feb  6 19:45 queuedata.json
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc       100 Feb  7 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 18:13:12] -rwxr-xr-x. 1 boinc boinc      7986 Feb  7 11:18 run_atlas
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc       105 Feb  7 11:18 job.xml
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc      6390 Feb  7 11:18 init_data.xml
[2026-02-07 18:13:12] -rw-r--r--. 2 boinc boinc 683798661 Feb  7 11:18 EVNT.48508760._000020.pool.root.1
[2026-02-07 18:13:12] -rw-r--r--. 2 boinc boinc     15845 Feb  7 11:18 start_atlas.sh
[2026-02-07 18:13:12] drwxrwx--x. 2 boinc boinc        68 Feb  7 11:18 shared
[2026-02-07 18:13:12] -rw-r--r--. 2 boinc boinc    597951 Feb  7 11:18 input.tar.gz
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc         0 Feb  7 11:18 boinc_lockfile
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc      2544 Feb  7 11:18 pandaJob.out
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc       415 Feb  7 11:25 workernode_map.json
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc   1009488 Feb  7 11:25 agis_schedconf.cvmfs.json
[2026-02-07 18:13:12] drwx------. 5 boinc boinc      4096 Feb  7 11:25 pilot3
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc 287453400 Feb  7 18:10 HITS.48508763._000916.pool.root.1
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc       532 Feb  7 18:10 boinc_task_state.xml
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc        95 Feb  7 18:12 pilot_heartbeat.json
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc      1012 Feb  7 18:12 memory_monitor_summary.json
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc   1513088 Feb  7 18:12 agis_ddmendpoints.agis.ALL.json
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc    604066 Feb  7 18:12 log.48508763._000916.job.log.tgz.1
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc      6307 Feb  7 18:12 heartbeat.json
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc        28 Feb  7 18:12 wrapper_checkpoint.txt
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc      8192 Feb  7 18:12 boinc_mmap_file
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc      4880 Feb  7 18:13 pilotlog.txt
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc   3395125 Feb  7 18:13 log.48508763._000916.job.log.1
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc       357 Feb  7 18:13 output.list
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc       620 Feb  7 18:13 runtime_log
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc   4014080 Feb  7 18:13 result.tar.gz
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc      8816 Feb  7 18:13 runtime_log.err
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc       656 Feb  7 18:13 EHrNDmPzf88n9Rq4apOajLDm4fhM0noT9bVooX4SDmvGZKDmf42t3m.diag
[2026-02-07 18:13:12] -rw-r--r--. 1 boinc boinc     20659 Feb  7 18:13 stderr.txt
[2026-02-07 18:13:12] HITS file was successfully produced:
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc 287453400 Feb  7 18:10 shared/HITS.pool.root.1
[2026-02-07 18:13:12]  *** Contents of shared directory: ***
[2026-02-07 18:13:12] total 953016
[2026-02-07 18:13:12] -rw-r--r--. 2 boinc boinc 683798661 Feb  7 11:18 ATLAS.root_0
[2026-02-07 18:13:12] -rw-r--r--. 2 boinc boinc     15845 Feb  7 11:18 start_atlas.sh
[2026-02-07 18:13:12] -rw-r--r--. 2 boinc boinc    597951 Feb  7 11:18 input.tar.gz
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc 287453400 Feb  7 18:10 HITS.pool.root.1
[2026-02-07 18:13:12] -rw-------. 1 boinc boinc   4014080 Feb  7 18:13 result.tar.gz
18:13:13 (16189): run_atlas exited; CPU time 90700.363192
18:13:13 (16189): called boinc_finish(0)

</stderr_txt>
]]>

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