Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:47 (154483): wrapper (7.7.26015): starting
11:16:47 (154483): wrapper: running run_atlas (--nthreads 2)
[2026-02-07 11:16:47] Arguments: --nthreads 2
[2026-02-07 11:16:47] Threads: 2
[2026-02-07 11:16:47] Checking for CVMFS
[2026-02-07 11:16:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-07 11:16:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-07 11:16:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-07 11:16:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-07 11:16:48] 2.9.2.0 2935 1431 58312 155980 3 9 30332543 36864001 0 130560 0 442241 99.977 57071 19558 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-07 11:16:48] CVMFS is ok
[2026-02-07 11:16:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 11:16:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 11:16:48] Further information can be found at the LHC@home message board.
[2026-02-07 11:16:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 11:16:48] Checking for apptainer binary...
[2026-02-07 11:16:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-07 11:16:48] Running /usr/bin/apptainer --version
[2026-02-07 11:16:48] apptainer version 1.4.1-1.1
[2026-02-07 11:16:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 11:16:48] magicA244
[2026-02-07 11:16:48] apptainer works
[2026-02-07 11:16:48] Set ATHENA_PROC_NUMBER=2
[2026-02-07 11:16:48] Set ATHENA_CORE_NUMBER=2
[2026-02-07 11:16:48] Starting ATLAS job with PandaID=7004058493
[2026-02-07 11:16:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 14:20:32]  *** The last 200 lines of the pilot log: ***
[2026-02-07 14:20:32] 2026-02-07 13:19:47,733 | INFO     | [job] retrieve thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:47,803 | INFO     | all job control threads have been joined
[2026-02-07 14:20:32] 2026-02-07 13:19:47,829 | INFO     | [data] control thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:47,881 | INFO     | [data] copytool_in thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:47,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 14:20:32] 2026-02-07 13:19:47,974 | INFO     | [payload] control thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:48,076 | INFO     | [payload] validate_post thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:48,439 | INFO     | [job] job monitor thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:48,809 | INFO     | [job] control thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:48,895 | INFO     | [job] validate thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:48,989 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:48,991 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:49,005 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:49,155 | INFO     | [payload] failed_post thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:49,924 | INFO     | [data] copytool_out thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:50,734 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:19:57,607 | INFO     | job.realtimelogging is not enabled
[2026-02-07 14:20:32] 2026-02-07 13:19:58,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 14:20:32] 2026-02-07 13:20:16,269 | INFO     | PID=158508 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 14:20:32] 2026-02-07 13:20:16,270 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 14:20:32] 2026-02-07 13:20:16,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 14:20:32] 2026-02-07 13:20:16,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 14:20:32] 2026-02-07 13:20:27,020 | INFO     | [monitor] cgroup control has ended
[2026-02-07 14:20:32] 2026-02-07 13:20:27,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365684524864)>', '<ExcThread(monitor, started 140364782475008)>']
[2026-02-07 14:20:32] 2026-02-07 13:20:27,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 14:20:32] 2026-02-07 13:20:27,329 | INFO     | [monitor] control thread has ended
[2026-02-07 14:20:32] 2026-02-07 13:20:32,071 | INFO     | all workflow threads have been joined
[2026-02-07 14:20:32] 2026-02-07 13:20:32,073 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 14:20:32] 2026-02-07 13:20:32,074 | INFO     | traces error code: 0
[2026-02-07 14:20:32] 2026-02-07 13:20:32,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 14:20:32] 2026-02-07 13:20:32,118 [wrapper] ==== pilot stdout END ====
[2026-02-07 14:20:32] 2026-02-07 13:20:32,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 14:20:32] 2026-02-07 13:20:32,123 [wrapper] pilotpid: 158508
[2026-02-07 14:20:32] 2026-02-07 13:20:32,125 [wrapper] Pilot exit status: 0
[2026-02-07 14:20:32] 2026-02-07 13:20:32,131 [wrapper] pandaids: 7004058493
[2026-02-07 14:20:32] 2026-02-07 13:20:32,144 [wrapper] cleanup supervisor_pilot  168855 158509
[2026-02-07 14:20:32] 2026-02-07 13:20:32,146 [wrapper] Test setup, not cleaning
[2026-02-07 14:20:32] 2026-02-07 13:20:32,148 [wrapper] apfmon messages muted
[2026-02-07 14:20:32] 2026-02-07 13:20:32,150 [wrapper] ==== wrapper stdout END ====
[2026-02-07 14:20:32] 2026-02-07 13:20:32,152 [wrapper] ==== wrapper stderr END ====
[2026-02-07 14:20:32]  *** Error codes and diagnostics ***
[2026-02-07 14:20:32]     "exeErrorCode": 0,
[2026-02-07 14:20:32]     "exeErrorDiag": "",
[2026-02-07 14:20:32]     "pilotErrorCode": 0,
[2026-02-07 14:20:32]     "pilotErrorDiag": "",
[2026-02-07 14:20:32]  *** Listing of results directory ***
[2026-02-07 14:20:32] total 937448
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc    584627 Feb  6 17:59 pilot3.tar.gz
[2026-02-07 14:20:32] -rwx------ 1 boinc boinc     36322 Feb  6 18:01 runpilot2-wrapper.sh
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc      5111 Feb  6 18:05 queuedata.json
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc       100 Feb  7 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 14:20:32] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 11:16 run_atlas
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc       105 Feb  7 11:16 job.xml
[2026-02-07 14:20:32] -rw-r--r-- 2 boinc boinc 672707469 Feb  7 11:16 EVNT.48431094._000284.pool.root.1
[2026-02-07 14:20:32] -rw-r--r-- 2 boinc boinc    597955 Feb  7 11:16 input.tar.gz
[2026-02-07 14:20:32] -rw-r--r-- 2 boinc boinc     15845 Feb  7 11:16 start_atlas.sh
[2026-02-07 14:20:32] drwxrwx--x 2 boinc boinc      4096 Feb  7 11:16 shared
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc         0 Feb  7 11:16 boinc_setup_complete
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc      6208 Feb  7 11:16 init_data.xml
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc         0 Feb  7 11:16 boinc_lockfile
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc      2554 Feb  7 11:16 pandaJob.out
[2026-02-07 14:20:32] -rw------- 1 boinc boinc   1009488 Feb  7 11:17 agis_schedconf.cvmfs.json
[2026-02-07 14:20:32] -rw------- 1 boinc boinc       421 Feb  7 11:17 workernode_map.json
[2026-02-07 14:20:32] drwx------ 5 boinc boinc      4096 Feb  7 11:17 pilot3
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc       531 Feb  7 14:19 boinc_task_state.xml
[2026-02-07 14:20:32] -rw------- 1 boinc boinc 279501557 Feb  7 14:19 HITS.48431096._006776.pool.root.1
[2026-02-07 14:20:32] -rw------- 1 boinc boinc      1016 Feb  7 14:19 memory_monitor_summary.json
[2026-02-07 14:20:32] -rw------- 1 boinc boinc   1513088 Feb  7 14:19 agis_ddmendpoints.agis.ALL.json
[2026-02-07 14:20:32] -rw------- 1 boinc boinc    352544 Feb  7 14:19 log.48431096._006776.job.log.tgz.1
[2026-02-07 14:20:32] -rw------- 1 boinc boinc      6310 Feb  7 14:19 heartbeat.json
[2026-02-07 14:20:32] -rw------- 1 boinc boinc        95 Feb  7 14:20 pilot_heartbeat.json
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc        28 Feb  7 14:20 wrapper_checkpoint.txt
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc      8192 Feb  7 14:20 boinc_mmap_file
[2026-02-07 14:20:32] -rw------- 1 boinc boinc      4819 Feb  7 14:20 pilotlog.txt
[2026-02-07 14:20:32] -rw------- 1 boinc boinc   1552292 Feb  7 14:20 log.48431096._006776.job.log.1
[2026-02-07 14:20:32] -rw------- 1 boinc boinc       357 Feb  7 14:20 output.list
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc       620 Feb  7 14:20 runtime_log
[2026-02-07 14:20:32] -rw------- 1 boinc boinc   1925120 Feb  7 14:20 result.tar.gz
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc      8912 Feb  7 14:20 runtime_log.err
[2026-02-07 14:20:32] -rw------- 1 boinc boinc       662 Feb  7 14:20 6lcMDmtNe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9VZKDmBzl6Ko.diag
[2026-02-07 14:20:32] -rw-r--r-- 1 boinc boinc      6517 Feb  7 14:20 stderr.txt
[2026-02-07 14:20:32] HITS file was successfully produced:
[2026-02-07 14:20:32] -rw------- 1 boinc boinc 279501557 Feb  7 14:19 shared/HITS.pool.root.1
[2026-02-07 14:20:32]  *** Contents of shared directory: ***
[2026-02-07 14:20:32] total 932384
[2026-02-07 14:20:32] -rw-r--r-- 2 boinc boinc 672707469 Feb  7 11:16 ATLAS.root_0
[2026-02-07 14:20:32] -rw-r--r-- 2 boinc boinc    597955 Feb  7 11:16 input.tar.gz
[2026-02-07 14:20:32] -rw-r--r-- 2 boinc boinc     15845 Feb  7 11:16 start_atlas.sh
[2026-02-07 14:20:32] -rw------- 1 boinc boinc 279501557 Feb  7 14:19 HITS.pool.root.1
[2026-02-07 14:20:32] -rw------- 1 boinc boinc   1925120 Feb  7 14:20 result.tar.gz
14:20:33 (154483): run_atlas exited; CPU time 21493.790253
14:20:33 (154483): called boinc_finish(0)

</stderr_txt>
]]>

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