Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:49:31 (5687): wrapper (7.7.26015): starting
17:49:31 (5687): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 17:49:31] Arguments: --nthreads 8
[2026-02-06 17:49:31] Threads: 8
[2026-02-06 17:49:31] Checking for CVMFS
[2026-02-06 17:49:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 17:49:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 17:49:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 17:49:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 17:49:32] 2.11.2.0 2797 170015 97252 155962 0 50 12802062 20275200 1 130560 0 44626253 99.817 12224019 32809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 17:49:32] CVMFS is ok
[2026-02-06 17:49:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 17:49:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 17:49:32] Further information can be found at the LHC@home message board.
[2026-02-06 17:49:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 17:49:32] Checking for apptainer binary...
[2026-02-06 17:49:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 17:49:32] Running /usr/bin/apptainer --version
[2026-02-06 17:49:32] apptainer version 1.3.2-1.el7
[2026-02-06 17:49:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 17:49:34] c-204-11.aglt2.org
[2026-02-06 17:49:34] apptainer works
[2026-02-06 17:49:34] Set ATHENA_PROC_NUMBER=8
[2026-02-06 17:49:34] Set ATHENA_CORE_NUMBER=8
[2026-02-06 17:49:34] Starting ATLAS job with PandaID=7004058101
[2026-02-06 17:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 20:53:22]  *** The last 200 lines of the pilot log: ***
[2026-02-06 20:53:22] 2026-02-07 01:52:39,712 | INFO     | job 7004058101 has finished - writing final server update
[2026-02-06 20:53:22] 2026-02-07 01:52:39,713 | INFO     | total number of processed events: 400 (read)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,714 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7004058101/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,715 | INFO     | extracted standard info from prmon json
[2026-02-06 20:53:22] 2026-02-07 01:52:39,715 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 20:53:22] 2026-02-07 01:52:39,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 20:53:22] 2026-02-07 01:52:39,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 20:53:22] 2026-02-07 01:52:39,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 20:53:22] 2026-02-07 01:52:39,718 | INFO     | fitting pss+swap vs Time
[2026-02-06 20:53:22] 2026-02-07 01:52:39,719 | INFO     | sum of square deviations: 1808350185.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,720 | INFO     | sum of deviations: 1204992718.999998
[2026-02-06 20:53:22] 2026-02-07 01:52:39,720 | INFO     | mean x: 1770423683.5
[2026-02-06 20:53:22] 2026-02-07 01:52:39,720 | INFO     | mean y: 2541290.6555555556
[2026-02-06 20:53:22] 2026-02-07 01:52:39,720 | INFO     | intersect: -1177179133.9936433
[2026-02-06 20:53:22] 2026-02-07 01:52:39,721 | INFO     | chi2: 2.224142450354526
[2026-02-06 20:53:22] 2026-02-07 01:52:39,721 | INFO     | sum of square deviations: 1661798600.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,722 | INFO     | sum of deviations: 13100529335.999996
[2026-02-06 20:53:22] 2026-02-07 01:52:39,722 | INFO     | mean x: 1770423531.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,722 | INFO     | mean y: 2553384.68
[2026-02-06 20:53:22] 2026-02-07 01:52:39,722 | INFO     | intersect: -13954303604.494379
[2026-02-06 20:53:22] 2026-02-07 01:52:39,723 | INFO     | chi2: 1.4618217509426066
[2026-02-06 20:53:22] 2026-02-07 01:52:39,723 | INFO     | current chi2=1.4618217509426066 (change=34.2748145151587 %)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,723 | INFO     | sum of square deviations: 1523386702.5
[2026-02-06 20:53:22] 2026-02-07 01:52:39,724 | INFO     | sum of deviations: 12639821834.000002
[2026-02-06 20:53:22] 2026-02-07 01:52:39,724 | INFO     | mean x: 1770423378.5
[2026-02-06 20:53:22] 2026-02-07 01:52:39,724 | INFO     | mean y: 2552876.9764705882
[2026-02-06 20:53:22] 2026-02-07 01:52:39,724 | INFO     | intersect: -14686978046.632433
[2026-02-06 20:53:22] 2026-02-07 01:52:39,725 | INFO     | chi2: 1.4629245825794865
[2026-02-06 20:53:22] 2026-02-07 01:52:39,725 | INFO     | current chi2=1.4629245825794865 (change=-0.07544227852464502 %)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,725 | INFO     | right removable region: 169
[2026-02-06 20:53:22] 2026-02-07 01:52:39,725 | INFO     | sum of square deviations: 1661798600.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,726 | INFO     | sum of deviations: -24804570056.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,726 | INFO     | mean x: 1770423836.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,726 | INFO     | mean y: 2567999.8685714286
[2026-02-06 20:53:22] 2026-02-07 01:52:39,726 | INFO     | intersect: 26428515204.827255
[2026-02-06 20:53:22] 2026-02-07 01:52:39,727 | INFO     | chi2: 0.8936775369231205
[2026-02-06 20:53:22] 2026-02-07 01:52:39,727 | INFO     | current chi2=0.8936775369231205 (change=59.81923114768709 %)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,727 | INFO     | sum of square deviations: 1523386702.5
[2026-02-06 20:53:22] 2026-02-07 01:52:39,728 | INFO     | sum of deviations: -21382525108.5
[2026-02-06 20:53:22] 2026-02-07 01:52:39,728 | INFO     | mean x: 1770423988.5
[2026-02-06 20:53:22] 2026-02-07 01:52:39,728 | INFO     | mean y: 2564176.1
[2026-02-06 20:53:22] 2026-02-07 01:52:39,728 | INFO     | intersect: 24852548309.91645
[2026-02-06 20:53:22] 2026-02-07 01:52:39,729 | INFO     | chi2: 0.8762155676930762
[2026-02-06 20:53:22] 2026-02-07 01:52:39,729 | INFO     | current chi2=0.8762155676930762 (change=1.9539451881228682 %)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,729 | INFO     | left removable region: 20
[2026-02-06 20:53:22] 2026-02-07 01:52:39,729 | INFO     | sum of square deviations: 1025693650.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,730 | INFO     | sum of deviations: 2736537104.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,730 | INFO     | mean x: 1770423958.0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,730 | INFO     | mean y: 2561243.275167785
[2026-02-06 20:53:22] 2026-02-07 01:52:39,730 | INFO     | intersect: -4720906481.105828
[2026-02-06 20:53:22] 2026-02-07 01:52:39,731 | INFO     | chi2: 0.0004354370634537251
[2026-02-06 20:53:22] 2026-02-07 01:52:39,731 | INFO     | current memory leak: 2.67 B/s (using 149 data points, chi2=0.00)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,731 | INFO     | could have reported an average CPU frequency of 1862 MHz (10 samples)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,731 | INFO     | ..............................
[2026-02-06 20:53:22] 2026-02-07 01:52:39,731 | INFO     | . Timing measurements:
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . get job = 0 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . initial setup = 8 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . payload setup = 8 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . stage-in = 0 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . payload execution = 10932 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . stage-out = 2 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | . log creation = 0 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,732 | INFO     | ..............................
[2026-02-06 20:53:22] 2026-02-07 01:52:39,817 | INFO     | 
[2026-02-06 20:53:22] 2026-02-07 01:52:39,817 | INFO     | job summary report
[2026-02-06 20:53:22] 2026-02-07 01:52:39,817 | INFO     | --------------------------------------------------
[2026-02-06 20:53:22] 2026-02-07 01:52:39,817 | INFO     | PanDA job id: 7004058101
[2026-02-06 20:53:22] 2026-02-07 01:52:39,818 | INFO     | task id: 48431096
[2026-02-06 20:53:22] 2026-02-07 01:52:39,818 | INFO     | errors: (none)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,818 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 20:53:22] 2026-02-07 01:52:39,818 | INFO     | pilot state: finished 
[2026-02-06 20:53:22] 2026-02-07 01:52:39,818 | INFO     | transexitcode: 0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,818 | INFO     | exeerrorcode: 0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,819 | INFO     | exeerrordiag: 
[2026-02-06 20:53:22] 2026-02-07 01:52:39,819 | INFO     | exitcode: 0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,819 | INFO     | exitmsg: OK
[2026-02-06 20:53:22] 2026-02-07 01:52:39,819 | INFO     | cpuconsumptiontime: 82978 s
[2026-02-06 20:53:22] 2026-02-07 01:52:39,819 | INFO     | nevents: 400
[2026-02-06 20:53:22] 2026-02-07 01:52:39,819 | INFO     | neventsw: 0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,820 | INFO     | pid: 15379
[2026-02-06 20:53:22] 2026-02-07 01:52:39,820 | INFO     | pgrp: 15379
[2026-02-06 20:53:22] 2026-02-07 01:52:39,820 | INFO     | corecount: 8
[2026-02-06 20:53:22] 2026-02-07 01:52:39,820 | INFO     | event service: False
[2026-02-06 20:53:22] 2026-02-07 01:52:39,820 | INFO     | sizes: {0: 2282874, 1: 2283080, 11: 2283108, 10944: 2312256, 10947: 2321310, 10950: 2321448}
[2026-02-06 20:53:22] 2026-02-07 01:52:39,820 | INFO     | --------------------------------------------------
[2026-02-06 20:53:22] 2026-02-07 01:52:39,821 | INFO     | 
[2026-02-06 20:53:22] 2026-02-07 01:52:39,821 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 20:53:22] 2026-02-07 01:52:39,849 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,850 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,850 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,850 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,853 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,853 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 20:53:22] 2026-02-07 01:52:39,853 | INFO     | job 7004058101 has completed (purged errors)
[2026-02-06 20:53:22] 2026-02-07 01:52:39,854 | INFO     | overall cleanup function is called
[2026-02-06 20:53:22] 2026-02-07 01:52:40,862 | INFO     | --- collectZombieJob: --- 10, [15379]
[2026-02-06 20:53:22] 2026-02-07 01:52:40,862 | INFO     | zombie collector waiting for pid 15379
[2026-02-06 20:53:22] 2026-02-07 01:52:40,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 20:53:22] 2026-02-07 01:52:40,862 | INFO     | collected zombie processes
[2026-02-06 20:53:22] 2026-02-07 01:52:40,862 | INFO     | will attempt to kill all subprocesses of pid=15379
[2026-02-06 20:53:22] 2026-02-07 01:52:40,952 | INFO     | process IDs to be killed: [15379] (in reverse order)
[2026-02-06 20:53:22] 2026-02-07 01:52:41,008 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 20:53:22] 2026-02-07 01:52:41,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 20:53:22] 2026-02-07 01:52:41,013 | INFO     | did not find any defunct processes belonging to 15379
[2026-02-06 20:53:22] 2026-02-07 01:52:41,015 | INFO     | did not find any defunct processes belonging to 15379
[2026-02-06 20:53:22] 2026-02-07 01:52:41,016 | INFO     | ready for new job
[2026-02-06 20:53:22] 2026-02-07 01:52:41,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 20:53:22] 2026-02-07 01:52:41,018 | INFO     | **************************************
[2026-02-06 20:53:22] 2026-02-07 01:52:41,018 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 20:53:22] 2026-02-07 01:52:41,018 | INFO     | **************************************
[2026-02-06 20:53:22] 2026-02-07 01:52:41,018 | INFO     | 
[2026-02-06 20:53:22] 2026-02-07 01:52:41,018 | INFO     | architecture information:
[2026-02-06 20:53:22] 2026-02-07 01:52:41,019 | INFO     | executing command: cat /etc/os-release
[2026-02-06 20:53:22] 2026-02-07 01:52:41,037 | INFO     | cat /etc/os-release:
[2026-02-06 20:53:22] NAME="CentOS Linux"
[2026-02-06 20:53:22] VERSION="7 (Core)"
[2026-02-06 20:53:22] ID="centos"
[2026-02-06 20:53:22] ID_LIKE="rhel fedora"
[2026-02-06 20:53:22] VERSION_ID="7"
[2026-02-06 20:53:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 20:53:22] ANSI_COLOR="0;31"
[2026-02-06 20:53:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 20:53:22] HOME_URL="https://www.centos.org/"
[2026-02-06 20:53:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 20:53:22] 
[2026-02-06 20:53:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 20:53:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 20:53:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 20:53:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 20:53:22] 
[2026-02-06 20:53:22] 2026-02-07 01:52:41,037 | INFO     | **************************************
[2026-02-06 20:53:22] 2026-02-07 01:52:41,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 20:53:22] 2026-02-07 01:52:41,560 | INFO     | sufficient remaining disk space (17561550848 B)
[2026-02-06 20:53:22] 2026-02-07 01:52:41,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 20:53:22] 2026-02-07 01:52:41,561 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 20:53:22] 2026-02-07 01:52:41,561 | INFO     | update_server=False
[2026-02-06 20:53:22] 2026-02-07 01:52:41,561 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 20:53:22] 2026-02-07 01:52:41,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 20:53:22] 2026-02-07 01:52:41,606 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 20:53:22] 2026-02-07 01:52:41,606 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 20:53:22] 2026-02-07 01:52:41,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 20:53:22] 2026-02-07 01:52:41,607 | INFO     | will abort loop
[2026-02-06 20:53:22] 2026-02-07 01:52:41,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 20:53:22] 2026-02-07 01:52:41,974 | INFO     | all data control threads have been joined
[2026-02-06 20:53:22] 2026-02-07 01:52:42,474 | INFO     | all job control threads have been joined
[2026-02-06 20:53:22] 2026-02-07 01:52:42,567 | INFO     | [job] retrieve thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:42,568 | INFO     | [job] queue monitor thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:42,613 | INFO     | [job] job monitor thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:42,670 | INFO     | [payload] failed_post thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:42,822 | INFO     | [data] copytool_in thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:42,872 | INFO     | all payload control threads have been joined
[2026-02-06 20:53:22] 2026-02-07 01:52:42,980 | INFO     | [data] control thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:42,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 20:53:22] 2026-02-07 01:52:43,047 | INFO     | [payload] validate_post thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,274 | INFO     | [job] validate thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,479 | INFO     | [job] control thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,875 | INFO     | [payload] control thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,919 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,934 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,964 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:43,967 | INFO     | [data] copytool_out thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:52:47,003 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 20:53:22] 2026-02-07 01:53:10,100 | INFO     | 10970s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-06 20:53:22] 2026-02-07 01:53:11,217 | INFO     | PID=9700 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-06 20:53:22] 2026-02-07 01:53:11,217 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 20:53:22] 2026-02-07 01:53:11,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 20:53:22] 2026-02-07 01:53:11,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 20:53:22] 2026-02-07 01:53:15,793 | INFO     | [monitor] cgroup control has ended
[2026-02-06 20:53:22] 2026-02-07 01:53:16,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187144828736)>', '<ExcThread(monitor, started 140186222573312)>']
[2026-02-06 20:53:22] 2026-02-07 01:53:17,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 20:53:22] 2026-02-07 01:53:17,249 | INFO     | [monitor] control thread has ended
[2026-02-06 20:53:22] 2026-02-07 01:53:21,824 | INFO     | all workflow threads have been joined
[2026-02-06 20:53:22] 2026-02-07 01:53:21,825 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 20:53:22] 2026-02-07 01:53:21,825 | INFO     | traces error code: 0
[2026-02-06 20:53:22] 2026-02-07 01:53:21,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 20:53:22] 2026-02-07 01:53:21,943 [wrapper] ==== pilot stdout END ====
[2026-02-06 20:53:22] 2026-02-07 01:53:21,947 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 20:53:22] 2026-02-07 01:53:21,951 [wrapper] pilotpid: 9700
[2026-02-06 20:53:22] 2026-02-07 01:53:21,956 [wrapper] Pilot exit status: 0
[2026-02-06 20:53:22] 2026-02-07 01:53:21,973 [wrapper] pandaids: 7004058101
[2026-02-06 20:53:22] 2026-02-07 01:53:22,018 [wrapper] cleanup supervisor_pilot 12863 9701
[2026-02-06 20:53:22] 2026-02-07 01:53:22,023 [wrapper] Test setup, not cleaning
[2026-02-06 20:53:22] 2026-02-07 01:53:22,027 [wrapper] apfmon messages muted
[2026-02-06 20:53:22] 2026-02-07 01:53:22,031 [wrapper] ==== wrapper stdout END ====
[2026-02-06 20:53:22] 2026-02-07 01:53:22,036 [wrapper] ==== wrapper stderr END ====
[2026-02-06 20:53:22]  *** Error codes and diagnostics ***
[2026-02-06 20:53:22]     "exeErrorCode": 0,
[2026-02-06 20:53:22]     "exeErrorDiag": "",
[2026-02-06 20:53:22]     "pilotErrorCode": 0,
[2026-02-06 20:53:22]     "pilotErrorDiag": "",
[2026-02-06 20:53:22]  *** Listing of results directory ***
[2026-02-06 20:53:22] total 944984
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas    584627 Feb  6 11:59 pilot3.tar.gz
[2026-02-06 20:53:22] -rwx------ 1 boincer umatlas     36322 Feb  6 12:01 runpilot2-wrapper.sh
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas      5111 Feb  6 12:05 queuedata.json
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas       100 Feb  6 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 20:53:22] -rwxr-xr-x 1 boincer umatlas      7986 Feb  6 17:49 run_atlas
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas       105 Feb  6 17:49 job.xml
[2026-02-06 20:53:22] -rw-r--r-- 2 boincer umatlas 676157263 Feb  6 17:49 EVNT.48431094._000281.pool.root.1
[2026-02-06 20:53:22] -rw-r--r-- 2 boincer umatlas     15845 Feb  6 17:49 start_atlas.sh
[2026-02-06 20:53:22] drwxrwx--x 2 boincer umatlas      4096 Feb  6 17:49 shared
[2026-02-06 20:53:22] -rw-r--r-- 2 boincer umatlas    597956 Feb  6 17:49 input.tar.gz
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas         0 Feb  6 17:49 boinc_lockfile
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas      2553 Feb  6 17:49 pandaJob.out
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas        57 Feb  6 17:49 setup.sh.local
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas   1009520 Feb  6 17:49 agis_schedconf.cvmfs.json
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas       432 Feb  6 17:49 workernode_map.json
[2026-02-06 20:53:22] drwx------ 5 boincer umatlas      4096 Feb  6 17:49 pilot3
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas      5909 Feb  6 20:48 init_data.xml
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas 283688688 Feb  6 20:51 HITS.48431096._006595.pool.root.1
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas       531 Feb  6 20:51 boinc_task_state.xml
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas      1049 Feb  6 20:52 memory_monitor_summary.json
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas        95 Feb  6 20:52 pilot_heartbeat.json
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas   1513088 Feb  6 20:52 agis_ddmendpoints.agis.ALL.json
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas    408542 Feb  6 20:52 log.48431096._006595.job.log.tgz.1
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas      6398 Feb  6 20:52 heartbeat.json
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas      8192 Feb  6 20:53 boinc_mmap_file
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas        28 Feb  6 20:53 wrapper_checkpoint.txt
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas      5043 Feb  6 20:53 pilotlog.txt
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas   1527631 Feb  6 20:53 log.48431096._006595.job.log.1
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas       357 Feb  6 20:53 output.list
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas       620 Feb  6 20:53 runtime_log
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas   1955840 Feb  6 20:53 result.tar.gz
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas      9342 Feb  6 20:53 runtime_log.err
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas       662 Feb  6 20:53 n8WLDmtNe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLVZKDmfAgqYn.diag
[2026-02-06 20:53:22] -rw-r--r-- 1 boincer umatlas     21040 Feb  6 20:53 stderr.txt
[2026-02-06 20:53:22] HITS file was successfully produced:
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas 283688688 Feb  6 20:51 shared/HITS.pool.root.1
[2026-02-06 20:53:22]  *** Contents of shared directory: ***
[2026-02-06 20:53:22] total 939872
[2026-02-06 20:53:22] -rw-r--r-- 2 boincer umatlas 676157263 Feb  6 17:49 ATLAS.root_0
[2026-02-06 20:53:22] -rw-r--r-- 2 boincer umatlas     15845 Feb  6 17:49 start_atlas.sh
[2026-02-06 20:53:22] -rw-r--r-- 2 boincer umatlas    597956 Feb  6 17:49 input.tar.gz
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas 283688688 Feb  6 20:51 HITS.pool.root.1
[2026-02-06 20:53:22] -rw------- 1 boincer umatlas   1955840 Feb  6 20:53 result.tar.gz
20:53:23 (5687): run_atlas exited; CPU time 82928.038734
20:53:23 (5687): called boinc_finish(0)

</stderr_txt>
]]>

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