Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:57:37 (17037): wrapper (7.7.26015): starting
17:57:37 (17037): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 17:57:37] Arguments: --nthreads 8
[2026-02-06 17:57:37] Threads: 8
[2026-02-06 17:57:37] Checking for CVMFS
[2026-02-06 17:57:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 17:57:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 17:57:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 17:57:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 17:57:38] 2.11.2.0 2701 164708 88264 155962 0 50 16121807 20275200 1 130560 0 40912123 99.882 8336455 28582 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-06 17:57:38] CVMFS is ok
[2026-02-06 17:57:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 17:57:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 17:57:38] Further information can be found at the LHC@home message board.
[2026-02-06 17:57:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 17:57:38] Checking for apptainer binary...
[2026-02-06 17:57:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 17:57:38] Running /usr/bin/apptainer --version
[2026-02-06 17:57:38] apptainer version 1.3.2-1.el7
[2026-02-06 17:57:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 17:57:40] c-204-1.aglt2.org
[2026-02-06 17:57:40] apptainer works
[2026-02-06 17:57:40] Set ATHENA_PROC_NUMBER=8
[2026-02-06 17:57:40] Set ATHENA_CORE_NUMBER=8
[2026-02-06 17:57:40] Starting ATLAS job with PandaID=7004058496
[2026-02-06 17:57:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 20:58:27]  *** The last 200 lines of the pilot log: ***
[2026-02-06 20:58:27] 2026-02-07 01:57:24,463 | INFO     | sum of deviations: 4824479874.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,463 | INFO     | mean x: 1770424200.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,463 | INFO     | mean y: 2576393.350877193
[2026-02-06 20:58:27] 2026-02-07 01:57:24,463 | INFO     | intersect: -5506463708.265994
[2026-02-06 20:58:27] 2026-02-07 01:57:24,464 | INFO     | chi2: 0.03728094843761198
[2026-02-06 20:58:27] 2026-02-07 01:57:24,464 | INFO     | current chi2=0.03728094843761198 (change=97.31224395373069 %)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,464 | INFO     | sum of square deviations: 1418361477.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,465 | INFO     | sum of deviations: 4457320416.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,465 | INFO     | mean x: 1770424352.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,465 | INFO     | mean y: 2576749.512048193
[2026-02-06 20:58:27] 2026-02-07 01:57:24,465 | INFO     | intersect: -5561130907.139987
[2026-02-06 20:58:27] 2026-02-07 01:57:24,466 | INFO     | chi2: 0.018992269967131627
[2026-02-06 20:58:27] 2026-02-07 01:57:24,466 | INFO     | current chi2=0.018992269967131627 (change=49.05636588373187 %)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,466 | INFO     | sum of square deviations: 1294014960.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,467 | INFO     | sum of deviations: 5689926463.000002
[2026-02-06 20:58:27] 2026-02-07 01:57:24,467 | INFO     | mean x: 1770424505.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,467 | INFO     | mean y: 2575300.0683229812
[2026-02-06 20:58:27] 2026-02-07 01:57:24,467 | INFO     | intersect: -7782176463.344968
[2026-02-06 20:58:27] 2026-02-07 01:57:24,468 | INFO     | chi2: 0.0009563951857758049
[2026-02-06 20:58:27] 2026-02-07 01:57:24,468 | INFO     | current chi2=0.0009563951857758049 (change=94.96429238089519 %)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,468 | INFO     | sum of square deviations: 1177156955.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,469 | INFO     | sum of deviations: 4767822921.499998
[2026-02-06 20:58:27] 2026-02-07 01:57:24,469 | INFO     | mean x: 1770424657.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,469 | INFO     | mean y: 2576501.3012820515
[2026-02-06 20:58:27] 2026-02-07 01:57:24,469 | INFO     | intersect: -7168150585.654836
[2026-02-06 20:58:27] 2026-02-07 01:57:24,470 | INFO     | chi2: 0.0006956651119899634
[2026-02-06 20:58:27] 2026-02-07 01:57:24,470 | INFO     | current chi2=0.0006956651119899634 (change=27.261750964831922 %)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,470 | INFO     | sum of square deviations: 1067554900.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,471 | INFO     | sum of deviations: 3998533408.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,471 | INFO     | mean x: 1770424810.0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,471 | INFO     | mean y: 2577570.0331125828
[2026-02-06 20:58:27] 2026-02-07 01:57:24,471 | INFO     | intersect: -6628559385.206429
[2026-02-06 20:58:27] 2026-02-07 01:57:24,471 | INFO     | chi2: 0.0005210147864910685
[2026-02-06 20:58:27] 2026-02-07 01:57:24,472 | INFO     | current chi2=0.0005210147864910685 (change=25.105517365863616 %)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,472 | INFO     | sum of square deviations: 964976232.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | sum of deviations: 3477155580.500001
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | mean x: 1770424962.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | mean y: 2578344.815068493
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | intersect: -6376897989.295969
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | chi2: 0.0004902141794366637
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | current chi2=0.0004902141794366637 (change=5.911656991894775 %)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,473 | INFO     | left removable region: 60
[2026-02-06 20:58:27] 2026-02-07 01:57:24,474 | INFO     | sum of square deviations: 412686807.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,474 | INFO     | sum of deviations: 1198712616.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,474 | INFO     | mean x: 1770425694.5
[2026-02-06 20:58:27] 2026-02-07 01:57:24,474 | INFO     | mean y: 2582269.536363636
[2026-02-06 20:58:27] 2026-02-07 01:57:24,475 | INFO     | intersect: -5139892793.887913
[2026-02-06 20:58:27] 2026-02-07 01:57:24,475 | INFO     | chi2: 0.0003278449287717627
[2026-02-06 20:58:27] 2026-02-07 01:57:24,475 | INFO     | current memory leak: 2.90 B/s (using 110 data points, chi2=0.00)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,475 | INFO     | could have reported an average CPU frequency of 1745 MHz (9 samples)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | ..............................
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . Timing measurements:
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . get job = 0 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . initial setup = 8 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . payload setup = 8 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . stage-in = 0 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . payload execution = 10732 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . stage-out = 1 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,476 | INFO     | . log creation = 0 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,477 | INFO     | ..............................
[2026-02-06 20:58:27] 2026-02-07 01:57:24,688 | INFO     | 
[2026-02-06 20:58:27] 2026-02-07 01:57:24,689 | INFO     | job summary report
[2026-02-06 20:58:27] 2026-02-07 01:57:24,689 | INFO     | --------------------------------------------------
[2026-02-06 20:58:27] 2026-02-07 01:57:24,689 | INFO     | PanDA job id: 7004058496
[2026-02-06 20:58:27] 2026-02-07 01:57:24,689 | INFO     | task id: 48431096
[2026-02-06 20:58:27] 2026-02-07 01:57:24,689 | INFO     | errors: (none)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,690 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 20:58:27] 2026-02-07 01:57:24,690 | INFO     | pilot state: finished 
[2026-02-06 20:58:27] 2026-02-07 01:57:24,690 | INFO     | transexitcode: 0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,690 | INFO     | exeerrorcode: 0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,690 | INFO     | exeerrordiag: 
[2026-02-06 20:58:27] 2026-02-07 01:57:24,690 | INFO     | exitcode: 0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,691 | INFO     | exitmsg: OK
[2026-02-06 20:58:27] 2026-02-07 01:57:24,691 | INFO     | cpuconsumptiontime: 80639 s
[2026-02-06 20:58:27] 2026-02-07 01:57:24,691 | INFO     | nevents: 400
[2026-02-06 20:58:27] 2026-02-07 01:57:24,691 | INFO     | neventsw: 0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,691 | INFO     | pid: 25515
[2026-02-06 20:58:27] 2026-02-07 01:57:24,691 | INFO     | pgrp: 25515
[2026-02-06 20:58:27] 2026-02-07 01:57:24,692 | INFO     | corecount: 8
[2026-02-06 20:58:27] 2026-02-07 01:57:24,692 | INFO     | event service: False
[2026-02-06 20:58:27] 2026-02-07 01:57:24,692 | INFO     | sizes: {0: 2282876, 1: 2283110, 11: 2283110, 10745: 2312146, 10746: 2321144, 10748: 2321200, 10749: 2321586}
[2026-02-06 20:58:27] 2026-02-07 01:57:24,692 | INFO     | --------------------------------------------------
[2026-02-06 20:58:27] 2026-02-07 01:57:24,692 | INFO     | 
[2026-02-06 20:58:27] 2026-02-07 01:57:24,693 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 20:58:27] 2026-02-07 01:57:24,720 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,724 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,724 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 20:58:27] 2026-02-07 01:57:24,724 | INFO     | job 7004058496 has completed (purged errors)
[2026-02-06 20:58:27] 2026-02-07 01:57:24,725 | INFO     | overall cleanup function is called
[2026-02-06 20:58:27] 2026-02-07 01:57:25,551 | WARNING  | process 25515 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 20:58:27] 2026-02-07 01:57:25,602 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 20:58:27] 2026-02-07 01:57:25,663 | INFO     | number of running child processes to parent process 25515: 1
[2026-02-06 20:58:27] 2026-02-07 01:57:25,663 | INFO     | maximum number of monitored processes: 6
[2026-02-06 20:58:27] 2026-02-07 01:57:25,663 | INFO     | aborting job monitoring since job object (job id=7004058496) has expired
[2026-02-06 20:58:27] 2026-02-07 01:57:25,732 | INFO     | --- collectZombieJob: --- 10, [25515]
[2026-02-06 20:58:27] 2026-02-07 01:57:25,733 | INFO     | zombie collector waiting for pid 25515
[2026-02-06 20:58:27] 2026-02-07 01:57:25,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 20:58:27] 2026-02-07 01:57:25,733 | INFO     | collected zombie processes
[2026-02-06 20:58:27] 2026-02-07 01:57:25,733 | INFO     | will attempt to kill all subprocesses of pid=25515
[2026-02-06 20:58:27] 2026-02-07 01:57:25,794 | INFO     | process IDs to be killed: [25515] (in reverse order)
[2026-02-06 20:58:27] 2026-02-07 01:57:25,851 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 20:58:27] 2026-02-07 01:57:25,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 20:58:27] 2026-02-07 01:57:25,854 | INFO     | did not find any defunct processes belonging to 25515
[2026-02-06 20:58:27] 2026-02-07 01:57:25,856 | INFO     | did not find any defunct processes belonging to 25515
[2026-02-06 20:58:27] 2026-02-07 01:57:25,856 | INFO     | ready for new job
[2026-02-06 20:58:27] 2026-02-07 01:57:25,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 20:58:27] 2026-02-07 01:57:25,858 | INFO     | **************************************
[2026-02-06 20:58:27] 2026-02-07 01:57:25,858 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 20:58:27] 2026-02-07 01:57:25,858 | INFO     | **************************************
[2026-02-06 20:58:27] 2026-02-07 01:57:25,859 | INFO     | 
[2026-02-06 20:58:27] 2026-02-07 01:57:25,859 | INFO     | architecture information:
[2026-02-06 20:58:27] 2026-02-07 01:57:25,860 | INFO     | executing command: cat /etc/os-release
[2026-02-06 20:58:27] 2026-02-07 01:57:25,878 | INFO     | cat /etc/os-release:
[2026-02-06 20:58:27] NAME="CentOS Linux"
[2026-02-06 20:58:27] VERSION="7 (Core)"
[2026-02-06 20:58:27] ID="centos"
[2026-02-06 20:58:27] ID_LIKE="rhel fedora"
[2026-02-06 20:58:27] VERSION_ID="7"
[2026-02-06 20:58:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 20:58:27] ANSI_COLOR="0;31"
[2026-02-06 20:58:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 20:58:27] HOME_URL="https://www.centos.org/"
[2026-02-06 20:58:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 20:58:27] 
[2026-02-06 20:58:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 20:58:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 20:58:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 20:58:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 20:58:27] 
[2026-02-06 20:58:27] 2026-02-07 01:57:25,878 | INFO     | **************************************
[2026-02-06 20:58:27] 2026-02-07 01:57:26,382 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 20:58:27] 2026-02-07 01:57:26,401 | INFO     | sufficient remaining disk space (17569939456 B)
[2026-02-06 20:58:27] 2026-02-07 01:57:26,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 20:58:27] 2026-02-07 01:57:26,402 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 20:58:27] 2026-02-07 01:57:26,402 | INFO     | update_server=False
[2026-02-06 20:58:27] 2026-02-07 01:57:26,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 20:58:27] 2026-02-07 01:57:26,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 20:58:27] 2026-02-07 01:57:26,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 20:58:27] 2026-02-07 01:57:26,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 20:58:27] 2026-02-07 01:57:26,404 | INFO     | will abort loop
[2026-02-06 20:58:27] 2026-02-07 01:57:26,776 | INFO     | all data control threads have been joined
[2026-02-06 20:58:27] 2026-02-07 01:57:26,940 | INFO     | all job control threads have been joined
[2026-02-06 20:58:27] 2026-02-07 01:57:27,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 20:58:27] 2026-02-07 01:57:27,408 | INFO     | [job] retrieve thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,409 | INFO     | [job] queue monitor thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,410 | INFO     | [job] job monitor thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,618 | INFO     | [payload] failed_post thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,639 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,782 | INFO     | [data] control thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,871 | INFO     | all payload control threads have been joined
[2026-02-06 20:58:27] 2026-02-07 01:57:27,944 | INFO     | [job] control thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:27,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:28,127 | INFO     | [payload] validate_post thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:28,196 | INFO     | [data] copytool_in thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:28,695 | INFO     | [job] validate thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:28,707 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:28,838 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:28,877 | INFO     | [payload] control thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:29,391 | INFO     | [data] copytool_out thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:30,409 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 20:58:27] 2026-02-07 01:57:56,285 | INFO     | PID=21008 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-06 20:58:27] 2026-02-07 01:57:56,286 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 20:58:27] 2026-02-07 01:57:56,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 20:58:27] 2026-02-07 01:57:56,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 20:58:27] 2026-02-07 01:57:56,554 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-02-06 20:58:27] 2026-02-07 01:58:21,810 | INFO     | [monitor] cgroup control has ended
[2026-02-06 20:58:27] 2026-02-07 01:58:21,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330304759616)>', '<ExcThread(monitor, started 140329567106816)>']
[2026-02-06 20:58:27] 2026-02-07 01:58:22,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 20:58:27] 2026-02-07 01:58:22,403 | INFO     | [monitor] control thread has ended
[2026-02-06 20:58:27] 2026-02-07 01:58:26,973 | INFO     | all workflow threads have been joined
[2026-02-06 20:58:27] 2026-02-07 01:58:26,978 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 20:58:27] 2026-02-07 01:58:26,979 | INFO     | traces error code: 0
[2026-02-06 20:58:27] 2026-02-07 01:58:26,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 20:58:27] 2026-02-07 01:58:27,104 [wrapper] ==== pilot stdout END ====
[2026-02-06 20:58:27] 2026-02-07 01:58:27,109 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 20:58:27] 2026-02-07 01:58:27,113 [wrapper] pilotpid: 21008
[2026-02-06 20:58:27] 2026-02-07 01:58:27,118 [wrapper] Pilot exit status: 0
[2026-02-06 20:58:27] 2026-02-07 01:58:27,138 [wrapper] pandaids: 7004058496
[2026-02-06 20:58:27] 2026-02-07 01:58:27,188 [wrapper] cleanup supervisor_pilot 25003 21009
[2026-02-06 20:58:27] 2026-02-07 01:58:27,193 [wrapper] Test setup, not cleaning
[2026-02-06 20:58:27] 2026-02-07 01:58:27,197 [wrapper] apfmon messages muted
[2026-02-06 20:58:27] 2026-02-07 01:58:27,202 [wrapper] ==== wrapper stdout END ====
[2026-02-06 20:58:27] 2026-02-07 01:58:27,207 [wrapper] ==== wrapper stderr END ====
[2026-02-06 20:58:27]  *** Error codes and diagnostics ***
[2026-02-06 20:58:27]     "exeErrorCode": 0,
[2026-02-06 20:58:27]     "exeErrorDiag": "",
[2026-02-06 20:58:27]     "pilotErrorCode": 0,
[2026-02-06 20:58:27]     "pilotErrorDiag": "",
[2026-02-06 20:58:27]  *** Listing of results directory ***
[2026-02-06 20:58:27] total 934268
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer    584627 Feb  6 11:59 pilot3.tar.gz
[2026-02-06 20:58:27] -rwx------ 1 boincer boincer     36322 Feb  6 12:01 runpilot2-wrapper.sh
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer      5111 Feb  6 12:05 queuedata.json
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer       100 Feb  6 17:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 20:58:27] -rwxr-xr-x 1 boincer boincer      7986 Feb  6 17:57 run_atlas
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer       105 Feb  6 17:57 job.xml
[2026-02-06 20:58:27] -rw-r--r-- 2 boincer boincer 672707469 Feb  6 17:57 EVNT.48431094._000284.pool.root.1
[2026-02-06 20:58:27] -rw-r--r-- 2 boincer boincer     15845 Feb  6 17:57 start_atlas.sh
[2026-02-06 20:58:27] drwxrwx--x 2 boincer boincer      4096 Feb  6 17:57 shared
[2026-02-06 20:58:27] -rw-r--r-- 2 boincer boincer    597953 Feb  6 17:57 input.tar.gz
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer         0 Feb  6 17:57 boinc_lockfile
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer      2554 Feb  6 17:57 pandaJob.out
[2026-02-06 20:58:27] -rw------- 1 boincer boincer        57 Feb  6 17:57 setup.sh.local
[2026-02-06 20:58:27] -rw------- 1 boincer boincer   1009520 Feb  6 17:57 agis_schedconf.cvmfs.json
[2026-02-06 20:58:27] -rw------- 1 boincer boincer   1513088 Feb  6 17:57 agis_ddmendpoints.agis.ALL.json
[2026-02-06 20:58:27] -rw------- 1 boincer boincer       431 Feb  6 17:58 workernode_map.json
[2026-02-06 20:58:27] drwx------ 5 boincer boincer      4096 Feb  6 17:58 pilot3
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer      5910 Feb  6 20:56 init_data.xml
[2026-02-06 20:58:27] -rw------- 1 boincer boincer 276120521 Feb  6 20:56 HITS.48431096._006779.pool.root.1
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer       531 Feb  6 20:56 boinc_task_state.xml
[2026-02-06 20:58:27] -rw------- 1 boincer boincer        95 Feb  6 20:57 pilot_heartbeat.json
[2026-02-06 20:58:27] -rw------- 1 boincer boincer      1053 Feb  6 20:57 memory_monitor_summary.json
[2026-02-06 20:58:27] -rw------- 1 boincer boincer    445769 Feb  6 20:57 log.48431096._006779.job.log.tgz.1
[2026-02-06 20:58:27] -rw------- 1 boincer boincer      6404 Feb  6 20:57 heartbeat.json
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer      8192 Feb  6 20:58 boinc_mmap_file
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer        28 Feb  6 20:58 wrapper_checkpoint.txt
[2026-02-06 20:58:27] -rw------- 1 boincer boincer      4744 Feb  6 20:58 pilotlog.txt
[2026-02-06 20:58:27] -rw------- 1 boincer boincer   1510184 Feb  6 20:58 log.48431096._006779.job.log.1
[2026-02-06 20:58:27] -rw------- 1 boincer boincer       357 Feb  6 20:58 output.list
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer       620 Feb  6 20:58 runtime_log
[2026-02-06 20:58:27] -rw------- 1 boincer boincer   1976320 Feb  6 20:58 result.tar.gz
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer      9337 Feb  6 20:58 runtime_log.err
[2026-02-06 20:58:27] -rw------- 1 boincer boincer       661 Feb  6 20:58 pwdMDmtNe88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAWZKDm3Hv9Yn.diag
[2026-02-06 20:58:27] -rw-r--r-- 1 boincer boincer     21059 Feb  6 20:58 stderr.txt
[2026-02-06 20:58:27] HITS file was successfully produced:
[2026-02-06 20:58:27] -rw------- 1 boincer boincer 276120521 Feb  6 20:56 shared/HITS.pool.root.1
[2026-02-06 20:58:27]  *** Contents of shared directory: ***
[2026-02-06 20:58:27] total 929136
[2026-02-06 20:58:27] -rw-r--r-- 2 boincer boincer 672707469 Feb  6 17:57 ATLAS.root_0
[2026-02-06 20:58:27] -rw-r--r-- 2 boincer boincer     15845 Feb  6 17:57 start_atlas.sh
[2026-02-06 20:58:27] -rw-r--r-- 2 boincer boincer    597953 Feb  6 17:57 input.tar.gz
[2026-02-06 20:58:27] -rw------- 1 boincer boincer 276120521 Feb  6 20:56 HITS.pool.root.1
[2026-02-06 20:58:27] -rw------- 1 boincer boincer   1976320 Feb  6 20:58 result.tar.gz
20:58:28 (17037): run_atlas exited; CPU time 80567.774980
20:58:28 (17037): called boinc_finish(0)

</stderr_txt>
]]>

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