Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-12 18:17:47 (6676): vboxwrapper version 26210
2026-02-12 18:17:47 (6676): BOINC client version: 8.2.8
2026-02-12 18:17:48 (6676): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-02-12 18:17:48 (6676): Successfully copied 'init_data.xml' to the shared directory.
2026-02-12 18:17:49 (6676): Create VM. (boinc_91371e10c33fe973, slot#1)
2026-02-12 18:17:49 (6676): Setting Memory Size for VM. (4400MB)
2026-02-12 18:17:49 (6676): Setting CPU Count for VM. (4)
2026-02-12 18:17:50 (6676): Setting Chipset Options for VM.
2026-02-12 18:17:50 (6676): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-12 18:17:50 (6676): Setting Boot Options for VM.
2026-02-12 18:17:51 (6676): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-12 18:17:51 (6676): Enabling VM Network Access.
2026-02-12 18:17:51 (6676): Disabling USB Support for VM.
2026-02-12 18:17:51 (6676): Disabling COM Port Support for VM.
2026-02-12 18:17:52 (6676): Disabling LPT Port Support for VM.
2026-02-12 18:17:52 (6676): Disabling Audio Support for VM.
2026-02-12 18:17:52 (6676): Disabling Clipboard Support for VM.
2026-02-12 18:17:52 (6676): Disabling Drag and Drop Support for VM.
2026-02-12 18:17:53 (6676): Adding storage controller(s) to VM.
2026-02-12 18:17:53 (6676): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-12 18:17:54 (6676): Adding VirtualBox Guest Additions to VM.
2026-02-12 18:17:54 (6676): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-12 18:17:55 (6676): forwarding host port 59359 to guest port 80
2026-02-12 18:17:55 (6676): Enabling remote desktop for VM.
2026-02-12 18:17:55 (6676): Required extension pack not installed, remote desktop not enabled.
2026-02-12 18:17:55 (6676): Enabling shared directory for VM.
2026-02-12 18:17:56 (6676): Starting VM using VBoxManage interface. (boinc_91371e10c33fe973, slot#1)
2026-02-12 18:18:01 (6676): Successfully started VM. (PID = '11748')
2026-02-12 18:18:01 (6676): Reporting VM Process ID to BOINC.
2026-02-12 18:18:01 (6676): Guest Log: BIOS: VirtualBox 6.1.34
2026-02-12 18:18:01 (6676): Guest Log: CPUID EDX: 0x178bfbff
2026-02-12 18:18:01 (6676): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-12 18:18:01 (6676): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-12 18:18:01 (6676): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-12 18:18:01 (6676): Detected: Web Application Enabled (http://localhost:59359)
2026-02-12 18:18:01 (6676): Preference change detected
2026-02-12 18:18:01 (6676): Setting CPU throttle for VM. (100%)
2026-02-12 18:18:01 (6676): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-12 18:18:03 (6676): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-12 18:18:03 (6676): Guest Log: BIOS: Booting from Hard Disk...
2026-02-12 18:18:06 (6676): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-12 18:18:06 (6676): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-12 18:18:06 (6676): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-12 18:18:14 (6676): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-12 18:18:14 (6676): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-12 18:18:24 (6676): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000350 main     Log opened 2026-02-12T18:18:22.711414000Z
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000507 main     OS Product: Linux
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000559 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000607 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000655 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000656 main     Process ID: 1302
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.000658 main     Package type: LINUX_64BITS_GENERIC
2026-02-12 18:18:24 (6676): Guest Log: 00:00:00.002586 main     5.2.32 r132073 started. Verbose level = 0
2026-02-12 18:18:25 (6676): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-12 18:18:25 (6676): Guest Log: [INFO] Mounting shared directory
2026-02-12 18:18:25 (6676): Guest Log: [INFO] Checking for init_data.xml
2026-02-12 18:18:30 (6676): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-12 18:18:30 (6676): Guest Log: [INFO] Detected branch: prod
2026-02-12 18:18:30 (6676): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-12 18:18:30 (6676): Guest Log: Copying input files
2026-02-12 18:18:34 (6676): Guest Log: 00:00:10.005041 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 269 773 000ns (GuestNow=1 770 916 714 446 167 000 ns GuestLast=1 770 920 302 715 940 000 ns fSetTimeLastLoop=true )
2026-02-12 18:18:36 (6676): Guest Log: Copied input files into RunAtlas.
2026-02-12 18:18:36 (6676): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-12 18:18:36 (6676): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-12 18:18:37 (6676): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-12 18:18:37 (6676): Guest Log: Further information can be found at the LHC@home message board.
2026-02-12 18:18:47 (6676): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-12 18:18:47 (6676): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-12 18:18:47 (6676): Guest Log: 2.6.3.0 1578 0 32200 156162 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-12 18:18:49 (6676): Guest Log: copied the webapp to /var/www
2026-02-12 18:18:49 (6676): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-12 18:18:49 (6676): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-12 18:18:49 (6676): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-12 18:18:49 (6676): Guest Log:  *** Starting ATLAS job. (PandaID=6998368061 taskID=48508763) ***
2026-02-12 20:01:12 (6676): Status Report: Elapsed Time: '6000.261103'
2026-02-12 20:01:13 (6676): Status Report: CPU Time: '21690.531250'
2026-02-12 21:45:54 (6676): Status Report: Elapsed Time: '12000.591829'
2026-02-12 21:46:11 (6676): Status Report: CPU Time: '46669.703125'
2026-02-12 23:29:17 (6676): Status Report: Elapsed Time: '18007.561577'
2026-02-12 23:29:17 (6676): Status Report: CPU Time: '71315.203125'
2026-02-13 01:17:04 (6676): Status Report: Elapsed Time: '24007.603128'
2026-02-13 01:17:04 (6676): Status Report: CPU Time: '96967.390625'
2026-02-13 03:00:46 (6676): Status Report: Elapsed Time: '30008.543297'
2026-02-13 03:00:46 (6676): Status Report: CPU Time: '121743.750000'
2026-02-13 03:22:32 (6676): Guest Log:  *** Job finished ***
2026-02-13 03:22:32 (6676): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:21:56,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:21:56,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:22,501 | INFO     | [monitor] cgroup control has ended
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:22,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140102733875008)>', '<ExcThread(monitor, started 140101556365056)>']
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:23,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:23,249 | INFO     | [monitor] control thread has ended
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,723 | INFO     | all workflow threads have been joined
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,723 | INFO     | end of generic workflow (traces error code: 0)
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,723 | INFO     | traces error code: 0
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,874 [wrapper] ==== pilot stdout END ====
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,882 [wrapper] ==== wrapper stdout RESUME ====
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,889 [wrapper] pilotpid: 5980
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,897 [wrapper] Pilot exit status: 0
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:27,957 [wrapper] pandaids: 6998368061
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:28,016 [wrapper] cleanup supervisor_pilot  1547 5981
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:28,034 [wrapper] Test setup, not cleaning
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:28,043 [wrapper] apfmon messages muted
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:28,051 [wrapper] ==== wrapper stdout END ====
2026-02-13 03:22:32 (6676): Guest Log: 2026-02-13 02:22:28,059 [wrapper] ==== wrapper stderr END ====
2026-02-13 03:22:32 (6676): Guest Log:  *** Error codes and diagnostics ***
2026-02-13 03:22:32 (6676): Guest Log:     "exeErrorCode": 0,
2026-02-13 03:22:32 (6676): Guest Log:     "exeErrorDiag": "",
2026-02-13 03:22:32 (6676): Guest Log:     "pilotErrorCode": 0,
2026-02-13 03:22:32 (6676): Guest Log:     "pilotErrorDiag": "",
2026-02-13 03:22:32 (6676): Guest Log:  *** Listing of results directory ***
2026-02-13 03:22:32 (6676): Guest Log: total 287136
2026-02-13 03:22:32 (6676): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 18:42 pilot3.tar.gz
2026-02-13 03:22:32 (6676): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 18:42 runpilot2-wrapper.sh
2026-02-13 03:22:32 (6676): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 18:43 queuedata.json
2026-02-13 03:22:32 (6676): Guest Log: -rwxr-xr-x. 1 atlas atlas      8808 Feb 12 17:18 init_data.xml
2026-02-13 03:22:33 (6676): Guest Log: -rwxr-xr-x. 1 atlas atlas    597939 Feb 12 17:18 input.tar.gz
2026-02-13 03:22:33 (6676): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 12 17:18 start_atlas.sh
2026-02-13 03:22:33 (6676): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 12 17:18 EVNT.48508760._000004.pool.root.1 -> /data/./ATLAS.root_0
2026-02-13 03:22:33 (6676): Guest Log: -rw-r--r--. 1 atlas atlas      2541 Feb 12 17:18 pandaJob.out
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas    999474 Feb 12 17:19 agis_schedconf.cvmfs.json
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas       426 Feb 12 17:19 workernode_map.json
2026-02-13 03:22:33 (6676): Guest Log: drwx------. 5 atlas atlas      4096 Feb 12 17:19 pilot3
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas 279980775 Feb 13 02:20 HITS.48508763._000060.pool.root.1
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas        95 Feb 13 02:21 pilot_heartbeat.json
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas      1028 Feb 13 02:21 memory_monitor_summary.json
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas   1512955 Feb 13 02:21 agis_ddmendpoints.agis.ALL.json
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas    643480 Feb 13 02:21 log.48508763._000060.job.log.tgz.1
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas      6361 Feb 13 02:21 heartbeat.json
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas      4873 Feb 13 02:22 pilotlog.txt
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas   4446471 Feb 13 02:22 log.48508763._000060.job.log.1
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas       357 Feb 13 02:22 output.list
2026-02-13 03:22:33 (6676): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 13 02:22 runtime_log
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas   5109760 Feb 13 02:22 result.tar.gz
2026-02-13 03:22:33 (6676): Guest Log: -rw-r--r--. 1 atlas atlas      8770 Feb 13 02:22 runtime_log.err
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas       665 Feb 13 02:22 AUrMDm6xf88n9Rq4apOajLDm4fhM0noT9bVooX4SDm8BZKDm5QzlPm.diag
2026-02-13 03:22:33 (6676): Guest Log: Looking for outputfile HITS.48508763._000060.pool.root.1
2026-02-13 03:22:33 (6676): Guest Log: HITS file was successfully produced
2026-02-13 03:22:33 (6676): Guest Log: -rw-------. 1 atlas atlas 279980775 Feb 13 02:20 /home/atlas/RunAtlas/HITS.48508763._000060.pool.root.1
2026-02-13 03:22:34 (6676): Guest Log: Successfully finished the ATLAS job!
2026-02-13 03:22:34 (6676): Guest Log: Copying the results back to the shared directory!
2026-02-13 03:22:35 (6676): Guest Log:  *** Contents of shared directory: ***
2026-02-13 03:22:35 (6676): Guest Log: total 944660
2026-02-13 03:22:35 (6676): Guest Log: -rwxrwxrwx. 1 root root 681610080 Feb 12 17:17 ATLAS.root_0
2026-02-13 03:22:35 (6676): Guest Log: -rwxrwxrwx. 1 root root 279980775 Feb 13 02:22 HITS.pool.root.1
2026-02-13 03:22:35 (6676): Guest Log: -rwxrwxrwx. 1 root root      8808 Feb 12 17:17 init_data.xml
2026-02-13 03:22:35 (6676): Guest Log: -rwxrwxrwx. 1 root root    597939 Feb  6 22:48 input.tar.gz
2026-02-13 03:22:35 (6676): Guest Log: -rwxrwxrwx. 1 root root   5109760 Feb 13 02:22 result.tar.gz
2026-02-13 03:22:35 (6676): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 22:48 start_atlas.sh
2026-02-13 03:22:35 (6676): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-13 03:22:35 (6676): VM Completion File Detected.
2026-02-13 03:22:35 (6676): Powering off VM.
2026-02-13 03:22:37 (6676): Successfully stopped VM.
2026-02-13 03:22:37 (6676): Deregistering VM. (boinc_91371e10c33fe973, slot#1)
2026-02-13 03:22:37 (6676): Removing network bandwidth throttle group from VM.
2026-02-13 03:22:37 (6676): Removing VM from VirtualBox.
2026-02-13 03:22:42 (6676): called boinc_finish(0)

</stderr_txt>
]]>

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